RNA–Protein interactions for RNA: ENST00000613013.1

UBXN8-206, Transcript of UBX domain protein 8, humanhuman

TSL 2

Gene UBXN8, Length 528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN8-206ENST00000613013 RRP1P56182 461 aaKnown RBP11.96□□□□□ -0.49
UBXN8-206ENST00000613013 PNMA8AQ86V59 439 aaPredicted RBP11.96□□□□□ -0.49
UBXN8-206ENST00000613013 MPNDQ8N594 471 aa11.96□□□□□ -0.49
UBXN8-206ENST00000613013 NGEFQ8N5V2 710 aa11.96□□□□□ -0.49
UBXN8-206ENST00000613013 C21orf2O43822 256 aa11.95□□□□□ -0.5
UBXN8-206ENST00000613013 PLCB2Q00722 1185 aa11.95□□□□□ -0.5
UBXN8-206ENST00000613013 PPP1R15BQ5SWA1 713 aa11.95□□□□□ -0.5
UBXN8-206ENST00000613013 CST9Q5W186 159 aa11.95□□□□□ -0.5
UBXN8-206ENST00000613013 SRP68Q9UHB9 627 aaKnown RBP11.95□□□□□ -0.5
UBXN8-206ENST00000613013 ASAP1Q9ULH1 1129 aa11.95□□□□□ -0.5
UBXN8-206ENST00000613013 TLL2Q9Y6L7 1015 aa11.95□□□□□ -0.5
UBXN8-206ENST00000613013 MEGF6O75095 1541 aa11.95□□□□□ -0.5
UBXN8-206ENST00000613013 ANKRD26Q9UPS8 1709 aa11.94□□□□□ -0.5
UBXN8-206ENST00000613013 MFSD10Q14728 455 aa11.94□□□□□ -0.5
UBXN8-206ENST00000613013 WDR43Q15061 677 aaKnown RBP eCLIP11.94□□□□□ -0.5
UBXN8-206ENST00000613013 C2CD5Q86YS7 1000 aa11.94□□□□□ -0.5
UBXN8-206ENST00000613013 RAPGEF4Q8WZA2 1011 aa11.94□□□□□ -0.5
UBXN8-206ENST00000613013 IP6K1Q92551 441 aa11.94□□□□□ -0.5
UBXN8-206ENST00000613013 CTU1Q7Z7A3 348 aaKnown RBP11.93□□□□□ -0.5
UBXN8-206ENST00000613013 USHBP1Q8N6Y0 703 aa11.93□□□□□ -0.5
UBXN8-206ENST00000613013 CDCA7LQ96GN5 454 aa11.93□□□□□ -0.5
UBXN8-206ENST00000613013 DDX27Q96GQ7 796 aaKnown RBP11.93□□□□□ -0.5
UBXN8-206ENST00000613013 ZSWIM6Q9HCJ5 1215 aa11.93□□□□□ -0.5
UBXN8-206ENST00000613013 ADAMTS7Q9UKP4 1686 aa11.93□□□□□ -0.5
UBXN8-206ENST00000613013 FANCIQ9NVI1 1328 aa11.92□□□□□ -0.5
UBXN8-206ENST00000613013 POTEMA6NI47 508 aa11.92□□□□□ -0.5
UBXN8-206ENST00000613013 H0YIN7 160 aa11.92□□□□□ -0.5
UBXN8-206ENST00000613013 POLRMTO00411 1230 aaKnown RBP11.92□□□□□ -0.5
UBXN8-206ENST00000613013 TRAF5O00463 557 aa11.92□□□□□ -0.5
UBXN8-206ENST00000613013 HOXB1P14653 301 aaPredicted RBP11.92□□□□□ -0.5
UBXN8-206ENST00000613013 GPR153Q6NV75 609 aa11.92□□□□□ -0.5
UBXN8-206ENST00000613013 POTEGQ6S5H5 508 aa11.92□□□□□ -0.5
UBXN8-206ENST00000613013 TRMT2AQ8IZ69 625 aaKnown RBP11.92□□□□□ -0.5
UBXN8-206ENST00000613013 MARVELD3Q96A59 401 aa11.92□□□□□ -0.5
UBXN8-206ENST00000613013 COL6A3P12111 3177 aa11.92□□□□□ -0.5
UBXN8-206ENST00000613013 PCDH11XQ9BZA7 1347 aa11.91□□□□□ -0.5
UBXN8-206ENST00000613013 PCDH11YQ9BZA8 1340 aa11.91□□□□□ -0.5
UBXN8-206ENST00000613013 SCN4AP35499 1836 aa11.91□□□□□ -0.5
UBXN8-206ENST00000613013 RPS6KA4O75676 772 aa11.91□□□□□ -0.5
UBXN8-206ENST00000613013 TATP17735 454 aaPredicted RBP11.91□□□□□ -0.5
UBXN8-206ENST00000613013 NME9Q86XW9 330 aa11.91□□□□□ -0.5
UBXN8-206ENST00000613013 ZNF622Q969S3 477 aaKnown RBP eCLIP11.91□□□□□ -0.5
UBXN8-206ENST00000613013 CCDC136Q96JN2 1154 aa11.91□□□□□ -0.5
UBXN8-206ENST00000613013 ZIC5Q96T25 663 aa11.91□□□□□ -0.5
UBXN8-206ENST00000613013 TAOK3Q9H2K8 898 aa11.91□□□□□ -0.5
UBXN8-206ENST00000613013 LTN1O94822 1766 aa11.91□□□□□ -0.5
UBXN8-206ENST00000613013 MKI67P46013 3256 aaKnown RBP11.91□□□□□ -0.5
UBXN8-206ENST00000613013 EVC2Q86UK5 1308 aa11.9□□□□□ -0.5
UBXN8-206ENST00000613013 ARSIQ5FYB1 569 aa11.9□□□□□ -0.5
UBXN8-206ENST00000613013 BICDL1Q6ZP65 573 aa11.9□□□□□ -0.5
UBXN8-206ENST00000613013 CGNL1Q0VF96 1302 aa11.89□□□□□ -0.51
UBXN8-206ENST00000613013 CYP27B1O15528 508 aa11.89□□□□□ -0.51
UBXN8-206ENST00000613013 TRPA1O75762 1119 aa11.89□□□□□ -0.51
UBXN8-206ENST00000613013 RC3H1Q5TC82 1133 aaKnown RBP11.89□□□□□ -0.51
UBXN8-206ENST00000613013 DUSP27Q5VZP5 1158 aa11.89□□□□□ -0.51
UBXN8-206ENST00000613013 SAPCD2Q86UD0 394 aa11.89□□□□□ -0.51
UBXN8-206ENST00000613013 SLC12A5Q9H2X9 1139 aa11.89□□□□□ -0.51
UBXN8-206ENST00000613013 TMOD3Q9NYL9 352 aa11.89□□□□□ -0.51
UBXN8-206ENST00000613013 SALL2Q9Y467 1007 aaPredicted RBP11.89□□□□□ -0.51
UBXN8-206ENST00000613013 DICER1Q9UPY3 1922 aaKnown RBP11.88□□□□□ -0.51
UBXN8-206ENST00000613013 TM4SF1P30408 202 aa11.88□□□□□ -0.51
UBXN8-206ENST00000613013 SLFN5Q08AF3 891 aa11.88□□□□□ -0.51
UBXN8-206ENST00000613013 AKAP4Q5JQC9 854 aa11.88□□□□□ -0.51
UBXN8-206ENST00000613013 MAP2P11137 1827 aaKnown RBP11.88□□□□□ -0.51
UBXN8-206ENST00000613013 ZNF541Q9H0D2 1346 aa11.87□□□□□ -0.51
UBXN8-206ENST00000613013 CELF2O95319 508 aaKnown RBP11.87□□□□□ -0.51
UBXN8-206ENST00000613013 NBPF6Q5VWK0 638 aa11.87□□□□□ -0.51
UBXN8-206ENST00000613013 PTCD2Q8WV60 388 aaKnown RBP11.87□□□□□ -0.51
UBXN8-206ENST00000613013 KHSRPQ92945 711 aaKnown RBP eCLIP11.87□□□□□ -0.51
UBXN8-206ENST00000613013 NBPF4Q96M43 638 aa11.87□□□□□ -0.51
UBXN8-206ENST00000613013 PCDHGA4Q9Y5G9 962 aa11.87□□□□□ -0.51
UBXN8-206ENST00000613013 KIF20BQ96Q89 1820 aa11.87□□□□□ -0.51
UBXN8-206ENST00000613013 ITGB4P16144 1822 aa11.86□□□□□ -0.51
UBXN8-206ENST00000613013 AMPHP49418 695 aa11.86□□□□□ -0.51
UBXN8-206ENST00000613013 EMP3P54852 163 aa11.86□□□□□ -0.51
UBXN8-206ENST00000613013 NOGQ13253 232 aa11.86□□□□□ -0.51
UBXN8-206ENST00000613013 MORC1Q86VD1 984 aa11.86□□□□□ -0.51
UBXN8-206ENST00000613013 SYNE4Q8N205 404 aa11.86□□□□□ -0.51
UBXN8-206ENST00000613013 EXOC6Q8TAG9 804 aa11.86□□□□□ -0.51
UBXN8-206ENST00000613013 ATG3Q9NT62 314 aa11.86□□□□□ -0.51
UBXN8-206ENST00000613013 ADAMTSL1Q8N6G6 1762 aa11.85□□□□□ -0.51
UBXN8-206ENST00000613013 USP31Q70CQ4 1352 aa11.85□□□□□ -0.51
UBXN8-206ENST00000613013 COL25A1Q9BXS0 654 aaPredicted RBP11.85□□□□□ -0.51
UBXN8-206ENST00000613013 ZNF408Q9H9D4 720 aa11.85□□□□□ -0.51
UBXN8-206ENST00000613013 HDAC9Q9UKV0 1011 aa11.85□□□□□ -0.51
UBXN8-206ENST00000613013 USP42Q9H9J4 1324 aaKnown RBP11.85□□□□□ -0.51
UBXN8-206ENST00000613013 LTBP3Q9NS15 1303 aa11.85□□□□□ -0.51
UBXN8-206ENST00000613013 CD163L1Q9NR16 1453 aa11.84□□□□□ -0.51
UBXN8-206ENST00000613013 HOXC9P31274 260 aa11.84□□□□□ -0.51
UBXN8-206ENST00000613013 PKN2Q16513 984 aaKnown RBP11.84□□□□□ -0.51
UBXN8-206ENST00000613013 SLC4A9Q96Q91 983 aa11.84□□□□□ -0.51
UBXN8-206ENST00000613013 RNF186Q9NXI6 227 aa11.84□□□□□ -0.51
UBXN8-206ENST00000613013 SAGE1Q9NXZ1 904 aa11.84□□□□□ -0.51
UBXN8-206ENST00000613013 TRIOBPQ9H2D6 2365 aa11.84□□□□□ -0.51
UBXN8-206ENST00000613013 FAM208AQ9UK61 1670 aaKnown RBP11.84□□□□□ -0.51
UBXN8-206ENST00000613013 CNTNAP4Q9C0A0 1308 aa11.84□□□□□ -0.51
UBXN8-206ENST00000613013 RGPD2P0DJD1 1756 aa11.83□□□□□ -0.52
UBXN8-206ENST00000613013 APAF1O14727 1248 aa11.83□□□□□ -0.52
UBXN8-206ENST00000613013 ZPR1O75312 459 aa11.83□□□□□ -0.52
UBXN8-206ENST00000613013 OXER1Q8TDS5 423 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms