RNA–Protein interactions for RNA: ENST00000612778.4

MUC1-225, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-225ENST00000612778 TAF1LQ8IZX4 1826 aa17.16■□□□□ 0.34
MUC1-225ENST00000612778 C4BP0C0L5 1744 aa17.15■□□□□ 0.34
MUC1-225ENST00000612778 ARHGEF1Q92888 912 aaKnown RBP17.15■□□□□ 0.34
MUC1-225ENST00000612778 UBN2Q6ZU65 1347 aa17.15■□□□□ 0.34
MUC1-225ENST00000612778 PCCAP05165 728 aaPredicted RBP17.14■□□□□ 0.34
MUC1-225ENST00000612778 CLEC4GQ6UXB4 293 aa17.14■□□□□ 0.34
MUC1-225ENST00000612778 CHD1LQ86WJ1 897 aa17.14■□□□□ 0.34
MUC1-225ENST00000612778 ZBTB38Q8NAP3 1195 aaPredicted RBP17.14■□□□□ 0.34
MUC1-225ENST00000612778 FAM89AQ96GI7 184 aa17.14■□□□□ 0.34
MUC1-225ENST00000612778 NARFQ9UHQ1 456 aa17.14■□□□□ 0.34
MUC1-225ENST00000612778 EXOC6BQ9Y2D4 811 aa17.14■□□□□ 0.34
MUC1-225ENST00000612778 PHF14O94880 888 aa17.14■□□□□ 0.33
MUC1-225ENST00000612778 TRAPPC3LQ5T215 181 aa17.14■□□□□ 0.33
MUC1-225ENST00000612778 LNPKQ9C0E8 428 aa17.14■□□□□ 0.33
MUC1-225ENST00000612778 BCL2L12Q9HB09 334 aa17.14■□□□□ 0.33
MUC1-225ENST00000612778 SRP68Q9UHB9 627 aaKnown RBP17.14■□□□□ 0.33
MUC1-225ENST00000612778 ZNF652Q9Y2D9 606 aa17.14■□□□□ 0.33
MUC1-225ENST00000612778 APBB1O00213 710 aa17.13■□□□□ 0.33
MUC1-225ENST00000612778 FOXO4P98177 505 aa17.13■□□□□ 0.33
MUC1-225ENST00000612778 RABL6Q3YEC7 729 aaPredicted RBP17.13■□□□□ 0.33
MUC1-225ENST00000612778 USPL1Q5W0Q7 1092 aa17.13■□□□□ 0.33
MUC1-225ENST00000612778 NIP7Q9Y221 180 aaKnown RBP eCLIP17.13■□□□□ 0.33
MUC1-225ENST00000612778 ZPR1O75312 459 aa17.12■□□□□ 0.33
MUC1-225ENST00000612778 PDE4AP27815 886 aa17.12■□□□□ 0.33
MUC1-225ENST00000612778 SUSD4Q5VX71 490 aa17.12■□□□□ 0.33
MUC1-225ENST00000612778 SYNE4Q8N205 404 aa17.12■□□□□ 0.33
MUC1-225ENST00000612778 TRMT112Q9UI30 125 aaKnown RBP17.12■□□□□ 0.33
MUC1-225ENST00000612778 NUP98P52948 1817 aa17.12■□□□□ 0.33
MUC1-225ENST00000612778 RGL2O15211 777 aa17.12■□□□□ 0.33
MUC1-225ENST00000612778 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
MUC1-225ENST00000612778 HMGB2P26583 209 aaKnown RBP17.12■□□□□ 0.33
MUC1-225ENST00000612778 TSHZ2Q9NRE2 1034 aa17.12■□□□□ 0.33
MUC1-225ENST00000612778 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.11■□□□□ 0.33
MUC1-225ENST00000612778 ADRA2BP18089 450 aa17.11■□□□□ 0.33
MUC1-225ENST00000612778 RFC4P35249 363 aa17.11■□□□□ 0.33
MUC1-225ENST00000612778 PARP10Q53GL7 1025 aa17.11■□□□□ 0.33
MUC1-225ENST00000612778 LMBR1LQ6UX01 489 aa17.11■□□□□ 0.33
MUC1-225ENST00000612778 CDHR2Q9BYE9 1310 aa17.1■□□□□ 0.33
MUC1-225ENST00000612778 ANKRD36CQ5JPF3 1778 aa17.1■□□□□ 0.33
MUC1-225ENST00000612778 TNS1Q9HBL0 1735 aaKnown RBP17.1■□□□□ 0.33
MUC1-225ENST00000612778 USP42Q9H9J4 1324 aaKnown RBP17.1■□□□□ 0.33
MUC1-225ENST00000612778 FAM177BA6PVY3 158 aa17.1■□□□□ 0.33
MUC1-225ENST00000612778 SMARCA5O60264 1052 aaPredicted RBP17.1■□□□□ 0.33
MUC1-225ENST00000612778 UTP14AQ9BVJ6 771 aaKnown RBP17.1■□□□□ 0.33
MUC1-225ENST00000612778 PA2G4Q9UQ80 394 aaKnown RBP17.1■□□□□ 0.33
MUC1-225ENST00000612778 NOP58Q9Y2X3 529 aaKnown RBP17.1■□□□□ 0.33
MUC1-225ENST00000612778 SSFA2P28290 1259 aa17.09■□□□□ 0.33
MUC1-225ENST00000612778 TBC1D9BQ66K14 1250 aa17.09■□□□□ 0.33
MUC1-225ENST00000612778 PLA2G12BQ9BX93 195 aa17.09■□□□□ 0.33
MUC1-225ENST00000612778 ZBTB47Q9UFB7 747 aaPredicted RBP17.09■□□□□ 0.33
MUC1-225ENST00000612778 BCORQ6W2J9 1755 aa17.08■□□□□ 0.33
MUC1-225ENST00000612778 IRS4O14654 1257 aaPredicted RBP17.08■□□□□ 0.33
MUC1-225ENST00000612778 RFX5P48382 616 aaPredicted RBP17.08■□□□□ 0.33
MUC1-225ENST00000612778 ZNF827Q17R98 1081 aa17.08■□□□□ 0.33
MUC1-225ENST00000612778 BICDL1Q6ZP65 573 aa17.08■□□□□ 0.33
MUC1-225ENST00000612778 AKT1S1Q96B36 256 aa17.08■□□□□ 0.33
MUC1-225ENST00000612778 LRRCC1Q9C099 1032 aa17.08■□□□□ 0.33
MUC1-225ENST00000612778 BCL11AQ9H165 835 aa17.08■□□□□ 0.33
MUC1-225ENST00000612778 RAB11FIP3O75154 756 aa17.07■□□□□ 0.32
MUC1-225ENST00000612778 NTSR2O95665 410 aa17.07■□□□□ 0.32
MUC1-225ENST00000612778 EN1Q05925 392 aaPredicted RBP17.07■□□□□ 0.32
MUC1-225ENST00000612778 KLHDC4Q8TBB5 520 aa17.07■□□□□ 0.32
MUC1-225ENST00000612778 CAMKK2Q96RR4 588 aa17.07■□□□□ 0.32
MUC1-225ENST00000612778 CHMP3Q9Y3E7 222 aa17.07■□□□□ 0.32
MUC1-225ENST00000612778 SH3TC1Q8TE82 1336 aa17.07■□□□□ 0.32
MUC1-225ENST00000612778 EZH2Q15910 746 aaKnown RBP17.07■□□□□ 0.32
MUC1-225ENST00000612778 HSP90AB4PQ58FF6 505 aa17.07■□□□□ 0.32
MUC1-225ENST00000612778 C16orf71Q8IYS4 520 aaPredicted RBP17.07■□□□□ 0.32
MUC1-225ENST00000612778 CSF1RP07333 972 aa17.06■□□□□ 0.32
MUC1-225ENST00000612778 PTPN12Q05209 780 aaKnown RBP17.06■□□□□ 0.32
MUC1-225ENST00000612778 TFCP2L1Q9NZI6 479 aa17.06■□□□□ 0.32
MUC1-225ENST00000612778 SCN7AQ01118 1682 aa17.06■□□□□ 0.32
MUC1-225ENST00000612778 OS9Q13438 667 aaPredicted RBP17.05■□□□□ 0.32
MUC1-225ENST00000612778 NUTM1Q86Y26 1132 aa17.05■□□□□ 0.32
MUC1-225ENST00000612778 RHPN1Q8TCX5 695 aa17.05■□□□□ 0.32
MUC1-225ENST00000612778 SETDB2Q96T68 719 aa17.05■□□□□ 0.32
MUC1-225ENST00000612778 COPRSQ9NQ92 184 aa17.05■□□□□ 0.32
MUC1-225ENST00000612778 UBR3Q6ZT12 1888 aa17.05■□□□□ 0.32
MUC1-225ENST00000612778 PDE8AO60658 829 aa17.05■□□□□ 0.32
MUC1-225ENST00000612778 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
MUC1-225ENST00000612778 KIF1BPQ96EK5 621 aa17.05■□□□□ 0.32
MUC1-225ENST00000612778 SIL1Q9H173 461 aa17.05■□□□□ 0.32
MUC1-225ENST00000612778 CTSWP56202 376 aa17.04■□□□□ 0.32
MUC1-225ENST00000612778 G3BP1Q13283 466 aaKnown RBP eCLIP17.04■□□□□ 0.32
MUC1-225ENST00000612778 SF3B2Q13435 895 aaKnown RBP17.04■□□□□ 0.32
MUC1-225ENST00000612778 TTLL11Q8NHH1 800 aa17.04■□□□□ 0.32
MUC1-225ENST00000612778 OTUD7AQ8TE49 926 aaPredicted RBP17.04■□□□□ 0.32
MUC1-225ENST00000612778 CCDC85AQ96PX6 553 aaPredicted RBP17.04■□□□□ 0.32
MUC1-225ENST00000612778 IL1RAPL2Q9NP60 686 aa17.04■□□□□ 0.32
MUC1-225ENST00000612778 C4AP0C0L4 1744 aa17.04■□□□□ 0.32
MUC1-225ENST00000612778 GYS1P13807 737 aa17.03■□□□□ 0.32
MUC1-225ENST00000612778 FAM161AQ3B820 660 aa17.03■□□□□ 0.32
MUC1-225ENST00000612778 ERC1Q8IUD2 1116 aa17.03■□□□□ 0.32
MUC1-225ENST00000612778 PLEKHM2Q8IWE5 1019 aa17.03■□□□□ 0.32
MUC1-225ENST00000612778 RGPD3A6NKT7 1758 aaPredicted RBP17.02■□□□□ 0.32
MUC1-225ENST00000612778 RGPD4Q7Z3J3 1758 aa17.02■□□□□ 0.32
MUC1-225ENST00000612778 SASH1O94885 1247 aa17.02■□□□□ 0.31
MUC1-225ENST00000612778 BAG6P46379 1132 aa17.02■□□□□ 0.31
MUC1-225ENST00000612778 NFIXQ14938 502 aa17.02■□□□□ 0.31
MUC1-225ENST00000612778 CCDC57Q2TAC2 916 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms