RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 NARFQ9UHQ1 456 aa16.18■□□□□ 0.18
PRKN-210ENST00000612540 GPTP24298 496 aa16.17■□□□□ 0.18
PRKN-210ENST00000612540 CWF19L2Q2TBE0 894 aaKnown RBP16.17■□□□□ 0.18
PRKN-210ENST00000612540 USPL1Q5W0Q7 1092 aa16.17■□□□□ 0.18
PRKN-210ENST00000612540 NEURL1BA8MQ27 555 aa16.16■□□□□ 0.18
PRKN-210ENST00000612540 ALDH1L1O75891 902 aa16.16■□□□□ 0.18
PRKN-210ENST00000612540 TCIRG1Q13488 830 aa16.16■□□□□ 0.18
PRKN-210ENST00000612540 USP42Q9H9J4 1324 aaKnown RBP16.16■□□□□ 0.18
PRKN-210ENST00000612540 IGKV5-2P06315 115 aa16.15■□□□□ 0.18
PRKN-210ENST00000612540 YBX3P16989 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
PRKN-210ENST00000612540 CHMP4BQ9H444 224 aaKnown RBP16.15■□□□□ 0.18
PRKN-210ENST00000612540 C9orf78Q9NZ63 289 aaPredicted RBP16.15■□□□□ 0.18
PRKN-210ENST00000612540 BICDL1Q6ZP65 573 aa16.14■□□□□ 0.17
PRKN-210ENST00000612540 MEIS3Q99687 375 aa16.14■□□□□ 0.17
PRKN-210ENST00000612540 CWC25Q9NXE8 425 aaPredicted RBP16.14■□□□□ 0.17
PRKN-210ENST00000612540 NIP7Q9Y221 180 aaKnown RBP eCLIP16.14■□□□□ 0.17
PRKN-210ENST00000612540 GTF3C3Q9Y5Q9 886 aa16.14■□□□□ 0.17
PRKN-210ENST00000612540 CLEC4GQ6UXB4 293 aa16.13■□□□□ 0.17
PRKN-210ENST00000612540 ISCA1Q9BUE6 129 aa16.13■□□□□ 0.17
PRKN-210ENST00000612540 BCL2L12Q9HB09 334 aa16.13■□□□□ 0.17
PRKN-210ENST00000612540 CD2APQ9Y5K6 639 aa16.13■□□□□ 0.17
PRKN-210ENST00000612540 FAM177BA6PVY3 158 aa16.12■□□□□ 0.17
PRKN-210ENST00000612540 GRIN3BO60391 1043 aa16.12■□□□□ 0.17
PRKN-210ENST00000612540 GNAI3P08754 354 aa16.12■□□□□ 0.17
PRKN-210ENST00000612540 UBTFL1P0CB47 393 aaPredicted RBP16.12■□□□□ 0.17
PRKN-210ENST00000612540 GCKRQ14397 625 aa16.12■□□□□ 0.17
PRKN-210ENST00000612540 CCDC191Q8NCU4 936 aa16.12■□□□□ 0.17
PRKN-210ENST00000612540 C1orf115Q9H7X2 142 aa16.12■□□□□ 0.17
PRKN-210ENST00000612540 GRM8O00222 908 aa16.11■□□□□ 0.17
PRKN-210ENST00000612540 ZBTB7BO15156 539 aaPredicted RBP16.11■□□□□ 0.17
PRKN-210ENST00000612540 RGL2O15211 777 aa16.11■□□□□ 0.17
PRKN-210ENST00000612540 PARP10Q53GL7 1025 aa16.11■□□□□ 0.17
PRKN-210ENST00000612540 RTL5Q5HYW3 569 aaPredicted RBP16.11■□□□□ 0.17
PRKN-210ENST00000612540 TBC1D9BQ66K14 1250 aa16.11■□□□□ 0.17
PRKN-210ENST00000612540 NLRP10Q86W26 655 aa16.11■□□□□ 0.17
PRKN-210ENST00000612540 ZNF34Q8IZ26 560 aa16.11■□□□□ 0.17
PRKN-210ENST00000612540 JARID2Q92833 1246 aaPredicted RBP16.11■□□□□ 0.17
PRKN-210ENST00000612540 UBN2Q6ZU65 1347 aa16.11■□□□□ 0.17
PRKN-210ENST00000612540 GYS1P13807 737 aa16.1■□□□□ 0.17
PRKN-210ENST00000612540 TRIM28Q13263 835 aaKnown RBP16.1■□□□□ 0.17
PRKN-210ENST00000612540 UBE3BQ7Z3V4 1068 aa16.1■□□□□ 0.17
PRKN-210ENST00000612540 USP44Q9H0E7 712 aa16.1■□□□□ 0.17
PRKN-210ENST00000612540 NPHP1O15259 732 aa16.09■□□□□ 0.17
PRKN-210ENST00000612540 C1QTNF8P60827 252 aa16.09■□□□□ 0.17
PRKN-210ENST00000612540 ERICH6BQ5W0A0 696 aa16.09■□□□□ 0.17
PRKN-210ENST00000612540 SETDB2Q96T68 719 aa16.09■□□□□ 0.17
PRKN-210ENST00000612540 ZBTB40Q9NUA8 1239 aa16.09■□□□□ 0.17
PRKN-210ENST00000612540 TRMT112Q9UI30 125 aaKnown RBP16.09■□□□□ 0.17
PRKN-210ENST00000612540 KIF13BQ9NQT8 1826 aa16.09■□□□□ 0.17
PRKN-210ENST00000612540 GNAI2P04899 355 aa16.08■□□□□ 0.16
PRKN-210ENST00000612540 NBPF7P0C2Y1 421 aaPredicted RBP16.08■□□□□ 0.16
PRKN-210ENST00000612540 AAMPQ13685 434 aa16.08■□□□□ 0.16
PRKN-210ENST00000612540 PPP1R42Q7Z4L9 355 aa16.08■□□□□ 0.16
PRKN-210ENST00000612540 UTP14AQ9BVJ6 771 aaKnown RBP16.08■□□□□ 0.16
PRKN-210ENST00000612540 LRRFIP2Q9Y608 721 aaKnown RBP16.08■□□□□ 0.16
PRKN-210ENST00000612540 PCCAP05165 728 aaPredicted RBP16.07■□□□□ 0.16
PRKN-210ENST00000612540 GTF2E1P29083 439 aaPredicted RBP16.07■□□□□ 0.16
PRKN-210ENST00000612540 NFIXQ14938 502 aa16.07■□□□□ 0.16
PRKN-210ENST00000612540 SUSD4Q5VX71 490 aa16.07■□□□□ 0.16
PRKN-210ENST00000612540 NBPF5PQ86XG9 351 aaPredicted RBP16.07■□□□□ 0.16
PRKN-210ENST00000612540 FAM89AQ96GI7 184 aa16.07■□□□□ 0.16
PRKN-210ENST00000612540 HDAC5Q9UQL6 1122 aa16.07■□□□□ 0.16
PRKN-210ENST00000612540 CARMIL3Q8ND23 1372 aa16.07■□□□□ 0.16
PRKN-210ENST00000612540 IBTKQ9P2D0 1353 aaPredicted RBP16.07■□□□□ 0.16
PRKN-210ENST00000612540 KIAA1551Q9HCM1 1747 aa16.07■□□□□ 0.16
PRKN-210ENST00000612540 MYH3P11055 1940 aa16.07■□□□□ 0.16
PRKN-210ENST00000612540 NLGN1Q8N2Q7 840 aa16.06■□□□□ 0.16
PRKN-210ENST00000612540 ZBTB38Q8NAP3 1195 aaPredicted RBP16.06■□□□□ 0.16
PRKN-210ENST00000612540 SUCLG2Q96I99 432 aa16.06■□□□□ 0.16
PRKN-210ENST00000612540 UTYO14607 1347 aa16.05■□□□□ 0.16
PRKN-210ENST00000612540 SH3TC1Q8TE82 1336 aa16.05■□□□□ 0.16
PRKN-210ENST00000612540 H7C1W4 665 aa16.05■□□□□ 0.16
PRKN-210ENST00000612540 NTSR2O95665 410 aa16.05■□□□□ 0.16
PRKN-210ENST00000612540 NYXQ9GZU5 481 aa16.05■□□□□ 0.16
PRKN-210ENST00000612540 PPP4R2Q9NY27 417 aa16.05■□□□□ 0.16
PRKN-210ENST00000612540 LAMB2P55268 1798 aa16.05■□□□□ 0.16
PRKN-210ENST00000612540 BRCA1P38398 1863 aaKnown RBP16.04■□□□□ 0.16
PRKN-210ENST00000612540 NUTM1Q86Y26 1132 aa16.04■□□□□ 0.16
PRKN-210ENST00000612540 CCDC136Q96JN2 1154 aa16.04■□□□□ 0.16
PRKN-210ENST00000612540 WWC3Q9ULE0 1092 aa16.04■□□□□ 0.16
PRKN-210ENST00000612540 DDX60Q8IY21 1712 aaKnown RBP16.03■□□□□ 0.16
PRKN-210ENST00000612540 CDHR2Q9BYE9 1310 aa16.03■□□□□ 0.16
PRKN-210ENST00000612540 IRS4O14654 1257 aaPredicted RBP16.03■□□□□ 0.16
PRKN-210ENST00000612540 CASP7P55210 303 aa16.03■□□□□ 0.16
PRKN-210ENST00000612540 SYNE4Q8N205 404 aa16.03■□□□□ 0.16
PRKN-210ENST00000612540 CNBD1Q8NA66 436 aa16.03■□□□□ 0.16
PRKN-210ENST00000612540 BICC1Q9H694 974 aaKnown RBP16.03■□□□□ 0.16
PRKN-210ENST00000612540 CHMP3Q9Y3E7 222 aa16.03■□□□□ 0.16
PRKN-210ENST00000612540 PCDHB15Q9Y5E8 787 aa16.03■□□□□ 0.16
PRKN-210ENST00000612540 SERPINB2P05120 415 aa16.02■□□□□ 0.16
PRKN-210ENST00000612540 MMP10P09238 476 aa16.02■□□□□ 0.16
PRKN-210ENST00000612540 HCLS1P14317 486 aaPredicted RBP16.02■□□□□ 0.16
PRKN-210ENST00000612540 DDR1Q08345 913 aa16.02■□□□□ 0.16
PRKN-210ENST00000612540 ERFEQ4G0M1 354 aa16.02■□□□□ 0.16
PRKN-210ENST00000612540 TPTE2Q6XPS3 522 aa16.02■□□□□ 0.16
PRKN-210ENST00000612540 PARP3Q9Y6F1 533 aa16.02■□□□□ 0.16
PRKN-210ENST00000612540 ABCC12Q96J65 1359 aa16.01■□□□□ 0.15
PRKN-210ENST00000612540 POLRMTO00411 1230 aaKnown RBP16.01■□□□□ 0.15
PRKN-210ENST00000612540 HSP90B1P14625 803 aaKnown RBP16.01■□□□□ 0.15
PRKN-210ENST00000612540 TM4SF1P30408 202 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms