RNA–Protein interactions for RNA: ENST00000612509.4

SEMA3B-211, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-211ENST00000612509 UTP14AQ9BVJ6 771 aaKnown RBP23.25■■□□□ 1.31
SEMA3B-211ENST00000612509 RNF123Q5XPI4 1314 aa23.25■■□□□ 1.31
SEMA3B-211ENST00000612509 SLX4Q8IY92 1834 aa23.24■■□□□ 1.31
SEMA3B-211ENST00000612509 LAMB2P55268 1798 aa23.23■■□□□ 1.31
SEMA3B-211ENST00000612509 VAMP4O75379 141 aa23.23■■□□□ 1.31
SEMA3B-211ENST00000612509 ARHGAP27Q6ZUM4 889 aa23.23■■□□□ 1.31
SEMA3B-211ENST00000612509 RIC3Q7Z5B4 369 aa23.23■■□□□ 1.31
SEMA3B-211ENST00000612509 CNKSR1Q969H4 720 aa23.23■■□□□ 1.31
SEMA3B-211ENST00000612509 ISCA1Q9BUE6 129 aa23.23■■□□□ 1.31
SEMA3B-211ENST00000612509 ADCY9O60503 1353 aa23.23■■□□□ 1.31
SEMA3B-211ENST00000612509 DDX58O95786 925 aaKnown RBP23.22■■□□□ 1.31
SEMA3B-211ENST00000612509 NPR1P16066 1061 aa23.22■■□□□ 1.31
SEMA3B-211ENST00000612509 DDX60Q8IY21 1712 aaKnown RBP23.22■■□□□ 1.31
SEMA3B-211ENST00000612509 E9PSI1 815 aa23.21■■□□□ 1.31
SEMA3B-211ENST00000612509 ATP5J2-PTCD1G3V325 749 aa23.21■■□□□ 1.31
SEMA3B-211ENST00000612509 CRY2Q49AN0 593 aa23.21■■□□□ 1.31
SEMA3B-211ENST00000612509 PRPF40BQ6NWY9 871 aaKnown RBP23.2■■□□□ 1.3
SEMA3B-211ENST00000612509 FER1L6Q2WGJ9 1857 aa23.19■■□□□ 1.3
SEMA3B-211ENST00000612509 SH3TC1Q8TE82 1336 aa23.19■■□□□ 1.3
SEMA3B-211ENST00000612509 SLC4A2P04920 1241 aa23.19■■□□□ 1.3
SEMA3B-211ENST00000612509 G2E3Q7L622 706 aa23.19■■□□□ 1.3
SEMA3B-211ENST00000612509 TRMT112Q9UI30 125 aaKnown RBP23.19■■□□□ 1.3
SEMA3B-211ENST00000612509 SBF1O95248 1867 aa23.18■■□□□ 1.3
SEMA3B-211ENST00000612509 C3orf67Q6ZVT6 689 aa23.18■■□□□ 1.3
SEMA3B-211ENST00000612509 ZNF784Q8NCA9 323 aaPredicted RBP23.18■■□□□ 1.3
SEMA3B-211ENST00000612509 ZNF428Q96B54 188 aa23.18■■□□□ 1.3
SEMA3B-211ENST00000612509 MYD88Q99836 296 aa23.18■■□□□ 1.3
SEMA3B-211ENST00000612509 SLFN5Q08AF3 891 aa23.17■■□□□ 1.3
SEMA3B-211ENST00000612509 FLIIQ13045 1269 aa23.17■■□□□ 1.3
SEMA3B-211ENST00000612509 TRIM28Q13263 835 aaKnown RBP23.17■■□□□ 1.3
SEMA3B-211ENST00000612509 SLC10A5Q5PT55 438 aa23.17■■□□□ 1.3
SEMA3B-211ENST00000612509 METTL22Q9BUU2 404 aaPredicted RBP23.17■■□□□ 1.3
SEMA3B-211ENST00000612509 MAP3K2Q9Y2U5 619 aa23.17■■□□□ 1.3
SEMA3B-211ENST00000612509 C21orf2O43822 256 aa23.16■■□□□ 1.3
SEMA3B-211ENST00000612509 RASSF7Q02833 373 aa23.16■■□□□ 1.3
SEMA3B-211ENST00000612509 KSR2Q6VAB6 950 aa23.16■■□□□ 1.3
SEMA3B-211ENST00000612509 RPGRQ92834 1020 aaKnown RBP23.16■■□□□ 1.3
SEMA3B-211ENST00000612509 ZNF219Q9P2Y4 722 aaPredicted RBP23.16■■□□□ 1.3
SEMA3B-211ENST00000612509 PI4KAP2A4QPH2 592 aa23.15■■□□□ 1.3
SEMA3B-211ENST00000612509 SYNE4Q8N205 404 aa23.15■■□□□ 1.3
SEMA3B-211ENST00000612509 PI4KAP1Q8N8J0 262 aa23.15■■□□□ 1.3
SEMA3B-211ENST00000612509 CDCA7LQ96GN5 454 aa23.15■■□□□ 1.3
SEMA3B-211ENST00000612509 NLRP3Q96P20 1036 aa23.15■■□□□ 1.3
SEMA3B-211ENST00000612509 TIAM2Q8IVF5 1701 aa23.14■■□□□ 1.3
SEMA3B-211ENST00000612509 NFKBIEO00221 500 aa23.14■■□□□ 1.29
SEMA3B-211ENST00000612509 HCLS1P14317 486 aaPredicted RBP23.14■■□□□ 1.29
SEMA3B-211ENST00000612509 ALDH1B1P30837 517 aa23.13■■□□□ 1.29
SEMA3B-211ENST00000612509 HOXA10P31260 410 aaPredicted RBP23.13■■□□□ 1.29
SEMA3B-211ENST00000612509 FKBP5Q13451 457 aaPredicted RBP23.13■■□□□ 1.29
SEMA3B-211ENST00000612509 SOGA3Q5TF21 947 aa23.13■■□□□ 1.29
SEMA3B-211ENST00000612509 CCDC88AQ3V6T2 1871 aa23.12■■□□□ 1.29
SEMA3B-211ENST00000612509 C9orf131Q5VYM1 1079 aa23.12■■□□□ 1.29
SEMA3B-211ENST00000612509 CCDC191Q8NCU4 936 aa23.12■■□□□ 1.29
SEMA3B-211ENST00000612509 FAM89AQ96GI7 184 aa23.12■■□□□ 1.29
SEMA3B-211ENST00000612509 RBM17Q96I25 401 aaKnown RBP23.12■■□□□ 1.29
SEMA3B-211ENST00000612509 CWC25Q9NXE8 425 aaPredicted RBP23.12■■□□□ 1.29
SEMA3B-211ENST00000612509 C7orf43Q8WVR3 580 aa23.11■■□□□ 1.29
SEMA3B-211ENST00000612509 RNF181Q9P0P0 153 aa23.11■■□□□ 1.29
SEMA3B-211ENST00000612509 IGKV5-2P06315 115 aa23.1■■□□□ 1.29
SEMA3B-211ENST00000612509 NEXNQ0ZGT2 675 aa23.1■■□□□ 1.29
SEMA3B-211ENST00000612509 CCDC93Q567U6 631 aa23.1■■□□□ 1.29
SEMA3B-211ENST00000612509 RTL5Q5HYW3 569 aaPredicted RBP23.1■■□□□ 1.29
SEMA3B-211ENST00000612509 TRMT2AQ8IZ69 625 aaKnown RBP23.1■■□□□ 1.29
SEMA3B-211ENST00000612509 ZBTB38Q8NAP3 1195 aaPredicted RBP23.1■■□□□ 1.29
SEMA3B-211ENST00000612509 CRAMP1Q96RY5 1269 aa23.1■■□□□ 1.29
SEMA3B-211ENST00000612509 ABCC4O15439 1325 aa23.09■■□□□ 1.29
SEMA3B-211ENST00000612509 SNED1Q8TER0 1413 aa23.09■■□□□ 1.29
SEMA3B-211ENST00000612509 PRELPP51888 382 aa23.09■■□□□ 1.29
SEMA3B-211ENST00000612509 DNAAF4Q8WXU2 420 aa23.09■■□□□ 1.29
SEMA3B-211ENST00000612509 TAOK3Q9H2K8 898 aa23.09■■□□□ 1.29
SEMA3B-211ENST00000612509 LTBP3Q9NS15 1303 aa23.08■■□□□ 1.29
SEMA3B-211ENST00000612509 DICER1Q9UPY3 1922 aaKnown RBP23.08■■□□□ 1.29
SEMA3B-211ENST00000612509 IRS4O14654 1257 aaPredicted RBP23.08■■□□□ 1.29
SEMA3B-211ENST00000612509 PCCAP05165 728 aaPredicted RBP23.08■■□□□ 1.29
SEMA3B-211ENST00000612509 LMNB1P20700 586 aa23.08■■□□□ 1.29
SEMA3B-211ENST00000612509 NEURL1BA8MQ27 555 aa23.07■■□□□ 1.28
SEMA3B-211ENST00000612509 PPEF1O14829 653 aaPredicted RBP23.07■■□□□ 1.28
SEMA3B-211ENST00000612509 CWF19L2Q2TBE0 894 aaKnown RBP23.07■■□□□ 1.28
SEMA3B-211ENST00000612509 OLFM4Q6UX06 510 aa23.07■■□□□ 1.28
SEMA3B-211ENST00000612509 TAF1P21675 1872 aa23.07■■□□□ 1.28
SEMA3B-211ENST00000612509 HNRNPUQ00839 825 aaKnown RBP eCLIP23.06■■□□□ 1.28
SEMA3B-211ENST00000612509 MYH3P11055 1940 aa23.06■■□□□ 1.28
SEMA3B-211ENST00000612509 LRRC37AA6NMS7 1700 aa23.05■■□□□ 1.28
SEMA3B-211ENST00000612509 CDHR2Q9BYE9 1310 aa23.05■■□□□ 1.28
SEMA3B-211ENST00000612509 ZC3H4Q9UPT8 1303 aaKnown RBP23.05■■□□□ 1.28
SEMA3B-211ENST00000612509 COL4A1P02462 1669 aa23.04■■□□□ 1.28
SEMA3B-211ENST00000612509 SF3B3Q15393 1217 aaKnown RBP23.04■■□□□ 1.28
SEMA3B-211ENST00000612509 DDX46Q7L014 1031 aaKnown RBP23.04■■□□□ 1.28
SEMA3B-211ENST00000612509 SLC51AQ86UW1 340 aa23.04■■□□□ 1.28
SEMA3B-211ENST00000612509 ZNF526Q8TF50 670 aaPredicted RBP23.04■■□□□ 1.28
SEMA3B-211ENST00000612509 F6X3S4 739 aa23.03■■□□□ 1.28
SEMA3B-211ENST00000612509 HSP90B1P14625 803 aaKnown RBP23.03■■□□□ 1.28
SEMA3B-211ENST00000612509 FKBP4Q02790 459 aaKnown RBP eCLIP23.03■■□□□ 1.28
SEMA3B-211ENST00000612509 GRAPQ13588 217 aa23.03■■□□□ 1.28
SEMA3B-211ENST00000612509 CC2D2BQ6DHV5 1058 aa23.03■■□□□ 1.28
SEMA3B-211ENST00000612509 RTKN2Q8IZC4 609 aa23.03■■□□□ 1.28
SEMA3B-211ENST00000612509 MRPL50Q8N5N7 158 aaKnown RBP23.03■■□□□ 1.28
SEMA3B-211ENST00000612509 LINS1Q8NG48 757 aa23.03■■□□□ 1.28
SEMA3B-211ENST00000612509 GRAPLQ8TC17 118 aaPredicted RBP23.03■■□□□ 1.28
SEMA3B-211ENST00000612509 JARID2Q92833 1246 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms