RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 METTL24Q5JXM2 366 aa12.68□□□□□ -0.38
CDC42EP3-206ENST00000611976 LMBRD1Q9NUN5 540 aa12.68□□□□□ -0.38
CDC42EP3-206ENST00000611976 MYO6Q9UM54 1294 aa12.68□□□□□ -0.38
CDC42EP3-206ENST00000611976 ERICH4A6NGS2 130 aa12.68□□□□□ -0.38
CDC42EP3-206ENST00000611976 KIF5CO60282 957 aa12.68□□□□□ -0.38
CDC42EP3-206ENST00000611976 MAP3K5Q99683 1374 aa12.68□□□□□ -0.38
CDC42EP3-206ENST00000611976 PREX2Q70Z35 1606 aa12.68□□□□□ -0.38
CDC42EP3-206ENST00000611976 H0YHG0 523 aa12.68□□□□□ -0.38
CDC42EP3-206ENST00000611976 CCDC94Q9BW85 323 aaPredicted RBP12.68□□□□□ -0.38
CDC42EP3-206ENST00000611976 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
CDC42EP3-206ENST00000611976 RAD21O60216 631 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 TUBB4AP04350 444 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 OTUD7AQ8TE49 926 aaPredicted RBP12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 PDE4CQ08493 712 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 KSR2Q6VAB6 950 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 CNNM3Q8NE01 707 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 CCDC148Q8NFR7 591 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 BRF1Q92994 677 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 TRPM1Q7Z4N2 1603 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 GOLIM4O00461 696 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 CHL1O00533 1208 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 SYT1P21579 422 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 RUFY3Q7L099 469 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 CALCOCO1Q9P1Z2 691 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 ZC3H6P61129 1189 aaKnown RBP12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 BMS1Q14692 1282 aaKnown RBP12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 CCDC181Q5TID7 509 aa12.67□□□□□ -0.38
CDC42EP3-206ENST00000611976 GRM8O00222 908 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 KCNG4Q8TDN1 519 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 DEF6Q9H4E7 631 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 BABAM1Q9NWV8 329 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 FSD2A1L4K1 749 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 NMIQ13287 307 aaPredicted RBP12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 TSPYL1Q9H0U9 437 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 FAM177BA6PVY3 158 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 SKILP12757 684 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 ORC3Q9UBD5 711 aaPredicted RBP12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 USP16Q9Y5T5 823 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 KIAA0232Q92628 1395 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 CLASP1Q7Z460 1538 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 CREB3L3Q68CJ9 461 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 PPP1R9BQ96SB3 815 aa12.66□□□□□ -0.38
CDC42EP3-206ENST00000611976 MRPS27Q92552 414 aaKnown RBP12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 CCDC102AQ96A19 550 aa12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 ADCY10Q96PN6 1610 aa12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 SSRP1Q08945 709 aaKnown RBP12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 MCMDC2Q4G0Z9 681 aa12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 AKAP4Q5JQC9 854 aa12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 NAPBQ9H115 298 aa12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 DNAJC25Q9H1X3 360 aa12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 ANTXR1Q9H6X2 564 aa12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 SLC12A7Q9Y666 1083 aa12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 MCM3P25205 808 aa12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 IFIT5Q13325 482 aaKnown RBP12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 KRT222Q8N1A0 295 aa12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 NCOA7Q8NI08 942 aa12.65□□□□□ -0.38
CDC42EP3-206ENST00000611976 SPDYE4A6NLX3 237 aa12.65□□□□□ -0.39
CDC42EP3-206ENST00000611976 GOLGA8AA7E2F4 631 aa12.65□□□□□ -0.39
CDC42EP3-206ENST00000611976 STARD3NLO95772 234 aa12.65□□□□□ -0.39
CDC42EP3-206ENST00000611976 SSH2Q76I76 1423 aa12.65□□□□□ -0.39
CDC42EP3-206ENST00000611976 STK11IPQ8N1F8 1099 aa12.65□□□□□ -0.39
CDC42EP3-206ENST00000611976 STRN4Q9NRL3 753 aa12.65□□□□□ -0.39
CDC42EP3-206ENST00000611976 MTMR7Q9Y216 660 aa12.65□□□□□ -0.39
CDC42EP3-206ENST00000611976 SHROOM2Q13796 1616 aa12.64□□□□□ -0.39
CDC42EP3-206ENST00000611976 BIN1O00499 593 aa12.64□□□□□ -0.39
CDC42EP3-206ENST00000611976 ANXA1P04083 346 aa12.64□□□□□ -0.39
CDC42EP3-206ENST00000611976 UBE3BQ7Z3V4 1068 aa12.64□□□□□ -0.39
CDC42EP3-206ENST00000611976 PRDM11Q9NQV5 511 aa12.64□□□□□ -0.39
CDC42EP3-206ENST00000611976 LRP2BPQ9P2M1 347 aa12.64□□□□□ -0.39
CDC42EP3-206ENST00000611976 TTF1Q15361 905 aaPredicted RBP12.64□□□□□ -0.39
CDC42EP3-206ENST00000611976 Q6ZUG5 572 aa12.64□□□□□ -0.39
CDC42EP3-206ENST00000611976 LINS1Q8NG48 757 aa12.64□□□□□ -0.39
CDC42EP3-206ENST00000611976 MAP9Q49MG5 647 aa12.64□□□□□ -0.39
CDC42EP3-206ENST00000611976 KIAA1328Q86T90 577 aa12.64□□□□□ -0.39
CDC42EP3-206ENST00000611976 TCEAL9Q9UHQ7 104 aa12.64□□□□□ -0.39
CDC42EP3-206ENST00000611976 GOLGA6L10A6NI86 522 aa12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 KANK3Q6NY19 840 aa12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 PLEKHF1Q96S99 279 aa12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 CWC25Q9NXE8 425 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 GSPT1P15170 499 aaKnown RBP12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 EIF5P55010 431 aaKnown RBP12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 MAP3K12Q12852 859 aa12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 KIF4BQ2VIQ3 1234 aa12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 JAKMIP3Q5VZ66 844 aa12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 CCDC102BQ68D86 513 aa12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 PIBF1Q8WXW3 757 aa12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 TCEANC2Q96MN5 208 aa12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 FOXO3O43524 673 aa12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 ZFYP08048 801 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 SNRPA1P09661 255 aaKnown RBP12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 IARSP41252 1262 aaKnown RBP12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 IFNL2Q8IZJ0 200 aa12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 CCDC85AQ96PX6 553 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 GTPBP4Q9BZE4 634 aaKnown RBP12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 RNF41Q9H4P4 317 aaPredicted RBP12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 BRD1O95696 1058 aa12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 IGHMBP2P38935 993 aaKnown RBP12.63□□□□□ -0.39
CDC42EP3-206ENST00000611976 ANKRD13DQ6ZTN6 518 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms