RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 CRAMP1Q96RY5 1269 aa16.04■□□□□ 0.16
FAM228B-207ENST00000611917 NRXN2Q9P2S2 1712 aa16.04■□□□□ 0.16
FAM228B-207ENST00000611917 IBTKQ9P2D0 1353 aaPredicted RBP16.03■□□□□ 0.16
FAM228B-207ENST00000611917 ZC3H4Q9UPT8 1303 aaKnown RBP16.03■□□□□ 0.16
FAM228B-207ENST00000611917 TWISTNBQ3B726 338 aaPredicted RBP16.03■□□□□ 0.16
FAM228B-207ENST00000611917 CRY2Q49AN0 593 aa16.03■□□□□ 0.16
FAM228B-207ENST00000611917 C7orf43Q8WVR3 580 aa16.03■□□□□ 0.16
FAM228B-207ENST00000611917 TAOK3Q9H2K8 898 aa16.03■□□□□ 0.16
FAM228B-207ENST00000611917 MYH16Q9H6N6 1097 aa16.03■□□□□ 0.16
FAM228B-207ENST00000611917 PHAXQ9H814 394 aaKnown RBP16.03■□□□□ 0.16
FAM228B-207ENST00000611917 AFDNP55196 1824 aaKnown RBP16.03■□□□□ 0.16
FAM228B-207ENST00000611917 SH3TC1Q8TE82 1336 aa16.02■□□□□ 0.16
FAM228B-207ENST00000611917 NFKBIEO00221 500 aa16.02■□□□□ 0.16
FAM228B-207ENST00000611917 BBOX1O75936 387 aa16.02■□□□□ 0.16
FAM228B-207ENST00000611917 RASSF7Q02833 373 aa16.02■□□□□ 0.16
FAM228B-207ENST00000611917 C16orf71Q8IYS4 520 aaPredicted RBP16.02■□□□□ 0.16
FAM228B-207ENST00000611917 TSPYL6Q8N831 410 aa16.02■□□□□ 0.16
FAM228B-207ENST00000611917 ISCA1Q9BUE6 129 aa16.02■□□□□ 0.16
FAM228B-207ENST00000611917 ADCY9O60503 1353 aa16.01■□□□□ 0.15
FAM228B-207ENST00000611917 LTBP3Q9NS15 1303 aa16.01■□□□□ 0.15
FAM228B-207ENST00000611917 ATP5J2-PTCD1G3V325 749 aa16.01■□□□□ 0.15
FAM228B-207ENST00000611917 SLC4A2P04920 1241 aa16.01■□□□□ 0.15
FAM228B-207ENST00000611917 DDX46Q7L014 1031 aaKnown RBP16.01■□□□□ 0.15
FAM228B-207ENST00000611917 POTEDQ86YR6 584 aa16.01■□□□□ 0.15
FAM228B-207ENST00000611917 SCN7AQ01118 1682 aa16■□□□□ 0.15
FAM228B-207ENST00000611917 GLTPD2A6NH11 291 aa16■□□□□ 0.15
FAM228B-207ENST00000611917 HCLS1P14317 486 aaPredicted RBP16■□□□□ 0.15
FAM228B-207ENST00000611917 RRAGCQ9HB90 399 aa16■□□□□ 0.15
FAM228B-207ENST00000611917 KIAA1551Q9HCM1 1747 aa15.99■□□□□ 0.15
FAM228B-207ENST00000611917 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
FAM228B-207ENST00000611917 TOMM70O94826 608 aa15.99■□□□□ 0.15
FAM228B-207ENST00000611917 FKBP4Q02790 459 aaKnown RBP eCLIP15.99■□□□□ 0.15
FAM228B-207ENST00000611917 NEXNQ0ZGT2 675 aa15.99■□□□□ 0.15
FAM228B-207ENST00000611917 KSR2Q6VAB6 950 aa15.99■□□□□ 0.15
FAM228B-207ENST00000611917 SYNE4Q8N205 404 aa15.99■□□□□ 0.15
FAM228B-207ENST00000611917 CCDC191Q8NCU4 936 aa15.99■□□□□ 0.15
FAM228B-207ENST00000611917 UTRNP46939 3433 aa15.99■□□□□ 0.15
FAM228B-207ENST00000611917 LAMB4A4D0S4 1761 aa15.98■□□□□ 0.15
FAM228B-207ENST00000611917 VAMP4O75379 141 aa15.98■□□□□ 0.15
FAM228B-207ENST00000611917 VEGFAP15692 232 aaPredicted RBP15.98■□□□□ 0.15
FAM228B-207ENST00000611917 FAM89AQ96GI7 184 aa15.98■□□□□ 0.15
FAM228B-207ENST00000611917 MYD88Q99836 296 aa15.98■□□□□ 0.15
FAM228B-207ENST00000611917 METTL22Q9BUU2 404 aaPredicted RBP15.98■□□□□ 0.15
FAM228B-207ENST00000611917 TCERG1O14776 1098 aaKnown RBP15.97■□□□□ 0.15
FAM228B-207ENST00000611917 KIF3CO14782 793 aa15.97■□□□□ 0.15
FAM228B-207ENST00000611917 EXOSC9Q06265 439 aaKnown RBP15.97■□□□□ 0.15
FAM228B-207ENST00000611917 TMC4Q7Z404 712 aa15.97■□□□□ 0.15
FAM228B-207ENST00000611917 SP8Q8IXZ3 490 aa15.97■□□□□ 0.15
FAM228B-207ENST00000611917 ZBTB38Q8NAP3 1195 aaPredicted RBP15.97■□□□□ 0.15
FAM228B-207ENST00000611917 JDP2Q8WYK2 163 aa15.97■□□□□ 0.15
FAM228B-207ENST00000611917 BCORQ6W2J9 1755 aa15.96■□□□□ 0.15
FAM228B-207ENST00000611917 PI4KAP2A4QPH2 592 aa15.96■□□□□ 0.15
FAM228B-207ENST00000611917 IRS4O14654 1257 aaPredicted RBP15.96■□□□□ 0.15
FAM228B-207ENST00000611917 PPEF1O14829 653 aaPredicted RBP15.96■□□□□ 0.15
FAM228B-207ENST00000611917 PRELPP51888 382 aa15.96■□□□□ 0.15
FAM228B-207ENST00000611917 PI4KAP1Q8N8J0 262 aa15.96■□□□□ 0.15
FAM228B-207ENST00000611917 PSMD1Q99460 953 aa15.96■□□□□ 0.15
FAM228B-207ENST00000611917 VPS33BQ9H267 617 aa15.96■□□□□ 0.15
FAM228B-207ENST00000611917 NMRK2Q9NPI5 230 aa15.96■□□□□ 0.15
FAM228B-207ENST00000611917 CWC25Q9NXE8 425 aaPredicted RBP15.96■□□□□ 0.15
FAM228B-207ENST00000611917 MAP3K2Q9Y2U5 619 aa15.96■□□□□ 0.15
FAM228B-207ENST00000611917 ATP6V0A2Q9Y487 856 aa15.96■□□□□ 0.15
FAM228B-207ENST00000611917 FANCIQ9NVI1 1328 aa15.95■□□□□ 0.14
FAM228B-207ENST00000611917 RIC1Q4ADV7 1423 aa15.95■□□□□ 0.14
FAM228B-207ENST00000611917 SF3B3Q15393 1217 aaKnown RBP15.95■□□□□ 0.14
FAM228B-207ENST00000611917 SUPT20HQ8NEM7 779 aa15.95■□□□□ 0.14
FAM228B-207ENST00000611917 ZNF277Q9NRM2 450 aaPredicted RBP15.95■□□□□ 0.14
FAM228B-207ENST00000611917 ARFGEF1Q9Y6D6 1849 aa15.95■□□□□ 0.14
FAM228B-207ENST00000611917 ABCC12Q96J65 1359 aa15.95■□□□□ 0.14
FAM228B-207ENST00000611917 PCCAP05165 728 aaPredicted RBP15.94■□□□□ 0.14
FAM228B-207ENST00000611917 IARSP41252 1262 aaKnown RBP15.94■□□□□ 0.14
FAM228B-207ENST00000611917 GRAPQ13588 217 aa15.94■□□□□ 0.14
FAM228B-207ENST00000611917 RTL5Q5HYW3 569 aaPredicted RBP15.94■□□□□ 0.14
FAM228B-207ENST00000611917 C3orf67Q6ZVT6 689 aa15.94■□□□□ 0.14
FAM228B-207ENST00000611917 GRAPLQ8TC17 118 aaPredicted RBP15.94■□□□□ 0.14
FAM228B-207ENST00000611917 NUP98P52948 1817 aa15.94■□□□□ 0.14
FAM228B-207ENST00000611917 GOLGB1Q14789 3259 aaKnown RBP15.93■□□□□ 0.14
FAM228B-207ENST00000611917 BRCA1P38398 1863 aaKnown RBP15.93■□□□□ 0.14
FAM228B-207ENST00000611917 OLFM4Q6UX06 510 aa15.93■□□□□ 0.14
FAM228B-207ENST00000611917 RBM46Q8TBY0 533 aaKnown RBP15.93■□□□□ 0.14
FAM228B-207ENST00000611917 ZNF428Q96B54 188 aa15.93■□□□□ 0.14
FAM228B-207ENST00000611917 PDE8AO60658 829 aa15.92■□□□□ 0.14
FAM228B-207ENST00000611917 FLIIQ13045 1269 aa15.92■□□□□ 0.14
FAM228B-207ENST00000611917 FKBP5Q13451 457 aaPredicted RBP15.92■□□□□ 0.14
FAM228B-207ENST00000611917 MPNDQ8N594 471 aa15.92■□□□□ 0.14
FAM228B-207ENST00000611917 ANKRD31Q8N7Z5 1873 aa15.91■□□□□ 0.14
FAM228B-207ENST00000611917 E9PSI1 815 aa15.91■□□□□ 0.14
FAM228B-207ENST00000611917 EIF6P56537 245 aaKnown RBP15.91■□□□□ 0.14
FAM228B-207ENST00000611917 RPS8P62241 208 aaKnown RBP15.91■□□□□ 0.14
FAM228B-207ENST00000611917 FSTL1Q12841 308 aa15.91■□□□□ 0.14
FAM228B-207ENST00000611917 CCDC152Q4G0S7 254 aa15.91■□□□□ 0.14
FAM228B-207ENST00000611917 DPP8Q6V1X1 898 aaPredicted RBP15.91■□□□□ 0.14
FAM228B-207ENST00000611917 G2E3Q7L622 706 aa15.91■□□□□ 0.14
FAM228B-207ENST00000611917 LARGE2Q8N3Y3 721 aa15.91■□□□□ 0.14
FAM228B-207ENST00000611917 SPINK5Q9NQ38 1064 aaPredicted RBP15.91■□□□□ 0.14
FAM228B-207ENST00000611917 ABCC4O15439 1325 aa15.91■□□□□ 0.14
FAM228B-207ENST00000611917 DDNO94850 711 aaPredicted RBP15.9■□□□□ 0.14
FAM228B-207ENST00000611917 SLX4Q8IY92 1834 aa15.89■□□□□ 0.13
FAM228B-207ENST00000611917 IQCA1LA6NCM1 817 aa15.89■□□□□ 0.13
FAM228B-207ENST00000611917 HSPA6P17066 643 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms