RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 AACSQ86V21 672 aa17.99■□□□□ 0.47
PCDHGB1-202ENST00000611598 TFIP11Q9UBB9 837 aaKnown RBP17.99■□□□□ 0.47
PCDHGB1-202ENST00000611598 LRMPQ12912 555 aa17.99■□□□□ 0.47
PCDHGB1-202ENST00000611598 NMIQ13287 307 aaPredicted RBP17.99■□□□□ 0.47
PCDHGB1-202ENST00000611598 DACT1Q9NYF0 836 aa17.99■□□□□ 0.47
PCDHGB1-202ENST00000611598 GOLGA6L6A8MZA4 724 aa17.98■□□□□ 0.47
PCDHGB1-202ENST00000611598 MTX1Q13505 466 aa17.98■□□□□ 0.47
PCDHGB1-202ENST00000611598 EVI5LQ96CN4 794 aa17.98■□□□□ 0.47
PCDHGB1-202ENST00000611598 SLC27A2O14975 620 aa17.98■□□□□ 0.47
PCDHGB1-202ENST00000611598 TPM3P06753 285 aa17.98■□□□□ 0.47
PCDHGB1-202ENST00000611598 DMTNQ08495 405 aa17.98■□□□□ 0.47
PCDHGB1-202ENST00000611598 ANO6Q4KMQ2 910 aa17.98■□□□□ 0.47
PCDHGB1-202ENST00000611598 CBX8Q9HC52 389 aa17.98■□□□□ 0.47
PCDHGB1-202ENST00000611598 NRBP1Q9UHY1 535 aa17.98■□□□□ 0.47
PCDHGB1-202ENST00000611598 DIP2AQ14689 1571 aa17.98■□□□□ 0.47
PCDHGB1-202ENST00000611598 SPDYE4A6NLX3 237 aa17.97■□□□□ 0.47
PCDHGB1-202ENST00000611598 CHAF1AQ13111 956 aaPredicted RBP17.97■□□□□ 0.47
PCDHGB1-202ENST00000611598 CWF19L2Q2TBE0 894 aaKnown RBP17.97■□□□□ 0.47
PCDHGB1-202ENST00000611598 MAP4K1Q92918 833 aa17.97■□□□□ 0.47
PCDHGB1-202ENST00000611598 A0A0D9SFI3 127 aa17.97■□□□□ 0.47
PCDHGB1-202ENST00000611598 PROSER3Q2NL68 480 aa17.97■□□□□ 0.47
PCDHGB1-202ENST00000611598 CCDC186Q7Z3E2 898 aa17.97■□□□□ 0.47
PCDHGB1-202ENST00000611598 KLHL34Q8N239 644 aa17.97■□□□□ 0.47
PCDHGB1-202ENST00000611598 PDCL2Q8N4E4 241 aa17.97■□□□□ 0.47
PCDHGB1-202ENST00000611598 ABTB2Q8N961 1025 aa17.97■□□□□ 0.47
PCDHGB1-202ENST00000611598 C9orf78Q9NZ63 289 aaPredicted RBP17.97■□□□□ 0.47
PCDHGB1-202ENST00000611598 LARP1Q6PKG0 1096 aaKnown RBP17.96■□□□□ 0.47
PCDHGB1-202ENST00000611598 GPATCH3Q96I76 525 aa17.96■□□□□ 0.47
PCDHGB1-202ENST00000611598 TNMDQ9H2S6 317 aa17.96■□□□□ 0.47
PCDHGB1-202ENST00000611598 TLR7Q9NYK1 1049 aaKnown RBP17.96■□□□□ 0.47
PCDHGB1-202ENST00000611598 MAP3K2Q9Y2U5 619 aa17.96■□□□□ 0.47
PCDHGB1-202ENST00000611598 ELP1O95163 1332 aa17.96■□□□□ 0.47
PCDHGB1-202ENST00000611598 MARF1Q9Y4F3 1742 aaKnown RBP17.96■□□□□ 0.47
PCDHGB1-202ENST00000611598 STK3Q13188 491 aa17.96■□□□□ 0.47
PCDHGB1-202ENST00000611598 CCDC8Q9H0W5 538 aaPredicted RBP17.96■□□□□ 0.47
PCDHGB1-202ENST00000611598 EAF2Q96CJ1 260 aaPredicted RBP17.95■□□□□ 0.46
PCDHGB1-202ENST00000611598 SASH1O94885 1247 aa17.95■□□□□ 0.46
PCDHGB1-202ENST00000611598 C14orf37Q86TY3 774 aa17.95■□□□□ 0.46
PCDHGB1-202ENST00000611598 ANKRD7Q92527 254 aa17.95■□□□□ 0.46
PCDHGB1-202ENST00000611598 CTIFO43310 598 aaKnown RBP17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 U2AF2P26368 475 aaKnown RBP eCLIP17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 TOB2Q14106 344 aaPredicted RBP17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 NBPF6Q5VWK0 638 aa17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 SPATA32Q96LK8 384 aa17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 NBPF4Q96M43 638 aa17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 C16orf45Q96MC5 204 aaPredicted RBP17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 NR1I2O75469 434 aa17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 HOXB7P09629 217 aa17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 BLOC1S2Q6QNY1 142 aa17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 LEO1Q8WVC0 666 aaPredicted RBP17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 NPHP4O75161 1426 aaPredicted RBP17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 MED1Q15648 1581 aaPredicted RBP17.94■□□□□ 0.46
PCDHGB1-202ENST00000611598 BTBD11A6QL63 1104 aa17.93■□□□□ 0.46
PCDHGB1-202ENST00000611598 DRC7Q8IY82 874 aa17.93■□□□□ 0.46
PCDHGB1-202ENST00000611598 BOLA2Q9H3K6 86 aa17.93■□□□□ 0.46
PCDHGB1-202ENST00000611598 PRAMEF22A3QJZ6 481 aa17.93■□□□□ 0.46
PCDHGB1-202ENST00000611598 GOLGA6L4A6NEF3 574 aa17.93■□□□□ 0.46
PCDHGB1-202ENST00000611598 MPRIPQ6WCQ1 1025 aa17.93■□□□□ 0.46
PCDHGB1-202ENST00000611598 ZNF589Q86UQ0 364 aaPredicted RBP17.93■□□□□ 0.46
PCDHGB1-202ENST00000611598 TRIM5Q9C035 493 aa17.93■□□□□ 0.46
PCDHGB1-202ENST00000611598 PDCP20941 246 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 RPS6KB1P23443 525 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 PSMA5P28066 241 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 UTP14CQ5TAP6 766 aaKnown RBP17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 ERC1Q8IUD2 1116 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 KAZALD1Q96I82 304 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 PGBD1Q96JS3 809 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 CEBPAP49715 358 aaPredicted RBP17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 ZNF75DP51815 510 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 TEFQ10587 303 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 SUCLG2Q96I99 432 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 SCAND2PQ9GZW5 306 aaPredicted RBP17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 SIL1Q9H173 461 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 DNAJC25Q9H1X3 360 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 CLSTN2Q9H4D0 955 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 CHD2O14647 1828 aaKnown RBP17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 KDM3BQ7LBC6 1761 aa17.92■□□□□ 0.46
PCDHGB1-202ENST00000611598 NPHP3Q7Z494 1330 aa17.91■□□□□ 0.46
PCDHGB1-202ENST00000611598 JAK2O60674 1132 aa17.91■□□□□ 0.46
PCDHGB1-202ENST00000611598 PLA2G4DQ86XP0 818 aa17.91■□□□□ 0.46
PCDHGB1-202ENST00000611598 FSD1Q9BTV5 496 aa17.91■□□□□ 0.46
PCDHGB1-202ENST00000611598 DBF4Q9UBU7 674 aaPredicted RBP17.91■□□□□ 0.46
PCDHGB1-202ENST00000611598 ZSCAN25Q6NSZ9 544 aa17.91■□□□□ 0.46
PCDHGB1-202ENST00000611598 RBM43Q6ZSC3 357 aaKnown RBP17.91■□□□□ 0.46
PCDHGB1-202ENST00000611598 KLHDC4Q8TBB5 520 aa17.91■□□□□ 0.46
PCDHGB1-202ENST00000611598 EDC3Q96F86 508 aaKnown RBP17.91■□□□□ 0.46
PCDHGB1-202ENST00000611598 BICC1Q9H694 974 aaKnown RBP17.91■□□□□ 0.46
PCDHGB1-202ENST00000611598 NCBP1Q09161 790 aaKnown RBP17.9■□□□□ 0.46
PCDHGB1-202ENST00000611598 DDX11Q96FC9 970 aa17.9■□□□□ 0.46
PCDHGB1-202ENST00000611598 DDX19AQ9NUU7 478 aaKnown RBP17.9■□□□□ 0.46
PCDHGB1-202ENST00000611598 SETD1BQ9UPS6 1966 aaKnown RBP17.9■□□□□ 0.46
PCDHGB1-202ENST00000611598 ALDH1L1O75891 902 aa17.9■□□□□ 0.46
PCDHGB1-202ENST00000611598 BICD2Q8TD16 824 aa17.9■□□□□ 0.46
PCDHGB1-202ENST00000611598 ZNF165P49910 485 aa17.89■□□□□ 0.46
PCDHGB1-202ENST00000611598 NAA30Q147X3 362 aaPredicted RBP17.89■□□□□ 0.46
PCDHGB1-202ENST00000611598 CCDC144BQ3MJ40 725 aa17.89■□□□□ 0.46
PCDHGB1-202ENST00000611598 ZNF530Q6P9A1 599 aaPredicted RBP17.89■□□□□ 0.46
PCDHGB1-202ENST00000611598 KSR2Q6VAB6 950 aa17.89■□□□□ 0.46
PCDHGB1-202ENST00000611598 CCDC144CPQ8IYA2 1237 aa17.89■□□□□ 0.46
PCDHGB1-202ENST00000611598 TDRD7Q8NHU6 1098 aaKnown RBP17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms