RNA–Protein interactions for RNA: ENST00000611067.4

SEMA3B-210, Transcript of semaphorin 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-210ENST00000611067 LETM1O95202 739 aaPredicted RBP22.89■■□□□ 1.25
SEMA3B-210ENST00000611067 GNAI2P04899 355 aa22.89■■□□□ 1.25
SEMA3B-210ENST00000611067 TSHZ3Q63HK5 1081 aa22.89■■□□□ 1.25
SEMA3B-210ENST00000611067 ARID3AQ99856 593 aa22.89■■□□□ 1.25
SEMA3B-210ENST00000611067 USP25Q9UHP3 1055 aa22.89■■□□□ 1.25
SEMA3B-210ENST00000611067 HYPKQ9NX55 129 aa22.88■■□□□ 1.25
SEMA3B-210ENST00000611067 SNRPA1P09661 255 aaKnown RBP22.88■■□□□ 1.25
SEMA3B-210ENST00000611067 DISP2A7MBM2 1401 aa22.88■■□□□ 1.25
SEMA3B-210ENST00000611067 GNAI3P08754 354 aa22.87■■□□□ 1.25
SEMA3B-210ENST00000611067 FOXD4L6Q3SYB3 417 aaPredicted RBP22.87■■□□□ 1.25
SEMA3B-210ENST00000611067 FOXD4L3Q6VB84 417 aaPredicted RBP22.87■■□□□ 1.25
SEMA3B-210ENST00000611067 ADCY5O95622 1261 aa22.87■■□□□ 1.25
SEMA3B-210ENST00000611067 RILPL2Q969X0 211 aa22.87■■□□□ 1.25
SEMA3B-210ENST00000611067 DDX21Q9NR30 783 aaKnown RBP eCLIP22.87■■□□□ 1.25
SEMA3B-210ENST00000611067 RPAP1Q9BWH6 1393 aaPredicted RBP22.86■■□□□ 1.25
SEMA3B-210ENST00000611067 PI4KAP2A4QPH2 592 aa22.86■■□□□ 1.25
SEMA3B-210ENST00000611067 TRIM6-TRIM34B2RNG4 842 aa22.86■■□□□ 1.25
SEMA3B-210ENST00000611067 PI4KAP1Q8N8J0 262 aa22.86■■□□□ 1.25
SEMA3B-210ENST00000611067 DNAAF4Q8WXU2 420 aa22.86■■□□□ 1.25
SEMA3B-210ENST00000611067 ZNF830Q96NB3 372 aaPredicted RBP22.86■■□□□ 1.25
SEMA3B-210ENST00000611067 UPF3BQ9BZI7 483 aaKnown RBP22.86■■□□□ 1.25
SEMA3B-210ENST00000611067 SRCIN1Q9C0H9 1055 aa22.86■■□□□ 1.25
SEMA3B-210ENST00000611067 SPTLC3Q9NUV7 552 aa22.86■■□□□ 1.25
SEMA3B-210ENST00000611067 STAP2Q9UGK3 403 aa22.86■■□□□ 1.25
SEMA3B-210ENST00000611067 KLHL34Q8N239 644 aa22.85■■□□□ 1.25
SEMA3B-210ENST00000611067 NRAPQ86VF7 1730 aa22.85■■□□□ 1.25
SEMA3B-210ENST00000611067 PROSER3Q2NL68 480 aa22.85■■□□□ 1.25
SEMA3B-210ENST00000611067 ZNF710Q8N1W2 664 aa22.84■■□□□ 1.25
SEMA3B-210ENST00000611067 WNK3Q9BYP7 1800 aa22.84■■□□□ 1.25
SEMA3B-210ENST00000611067 TTC12Q9H892 705 aaPredicted RBP22.84■■□□□ 1.25
SEMA3B-210ENST00000611067 UTP14CQ5TAP6 766 aaKnown RBP22.83■■□□□ 1.25
SEMA3B-210ENST00000611067 DDX58O95786 925 aaKnown RBP22.83■■□□□ 1.24
SEMA3B-210ENST00000611067 HSPA4P34932 840 aa22.83■■□□□ 1.24
SEMA3B-210ENST00000611067 NWD2Q9ULI1 1742 aa22.82■■□□□ 1.24
SEMA3B-210ENST00000611067 EXOC5O00471 708 aa22.82■■□□□ 1.24
SEMA3B-210ENST00000611067 HCLS1P14317 486 aaPredicted RBP22.82■■□□□ 1.24
SEMA3B-210ENST00000611067 UBE2HP62256 183 aa22.82■■□□□ 1.24
SEMA3B-210ENST00000611067 MPNDQ8N594 471 aa22.82■■□□□ 1.24
SEMA3B-210ENST00000611067 TMOD3Q9NYL9 352 aa22.82■■□□□ 1.24
SEMA3B-210ENST00000611067 ADCY9O60503 1353 aa22.82■■□□□ 1.24
SEMA3B-210ENST00000611067 AOX1Q06278 1338 aa22.82■■□□□ 1.24
SEMA3B-210ENST00000611067 TOGARAM1Q9Y4F4 1720 aa22.82■■□□□ 1.24
SEMA3B-210ENST00000611067 KDM4AO75164 1064 aa22.82■■□□□ 1.24
SEMA3B-210ENST00000611067 ATP8B2P98198 1209 aa22.82■■□□□ 1.24
SEMA3B-210ENST00000611067 CDCA7Q9BWT1 371 aaPredicted RBP22.82■■□□□ 1.24
SEMA3B-210ENST00000611067 PDIA6Q15084 440 aa22.81■■□□□ 1.24
SEMA3B-210ENST00000611067 KSR2Q6VAB6 950 aa22.81■■□□□ 1.24
SEMA3B-210ENST00000611067 THRAP3Q9Y2W1 955 aaKnown RBP22.81■■□□□ 1.24
SEMA3B-210ENST00000611067 KIF3AQ9Y496 699 aa22.81■■□□□ 1.24
SEMA3B-210ENST00000611067 USP16Q9Y5T5 823 aa22.81■■□□□ 1.24
SEMA3B-210ENST00000611067 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
SEMA3B-210ENST00000611067 UBR2Q8IWV8 1755 aa22.81■■□□□ 1.24
SEMA3B-210ENST00000611067 PAPPAQ13219 1627 aa22.81■■□□□ 1.24
SEMA3B-210ENST00000611067 JCADQ9P266 1359 aa22.81■■□□□ 1.24
SEMA3B-210ENST00000611067 ZSCAN22P10073 491 aaPredicted RBP22.8■■□□□ 1.24
SEMA3B-210ENST00000611067 DMTNQ08495 405 aa22.8■■□□□ 1.24
SEMA3B-210ENST00000611067 JARID2Q92833 1246 aaPredicted RBP22.8■■□□□ 1.24
SEMA3B-210ENST00000611067 CNPY2Q9Y2B0 182 aa22.8■■□□□ 1.24
SEMA3B-210ENST00000611067 SPATA31A1Q5TZJ5 1347 aa22.8■■□□□ 1.24
SEMA3B-210ENST00000611067 PNMA6EA0A0J9YXQ4 647 aa22.8■■□□□ 1.24
SEMA3B-210ENST00000611067 UBTFL1P0CB47 393 aaPredicted RBP22.8■■□□□ 1.24
SEMA3B-210ENST00000611067 MYL6BP14649 208 aa22.8■■□□□ 1.24
SEMA3B-210ENST00000611067 UNC5CLQ8IV45 518 aa22.8■■□□□ 1.24
SEMA3B-210ENST00000611067 MAP3K2Q9Y2U5 619 aa22.8■■□□□ 1.24
SEMA3B-210ENST00000611067 BEND3Q5T5X7 828 aa22.79■■□□□ 1.24
SEMA3B-210ENST00000611067 PRDM10Q9NQV6 1147 aa22.79■■□□□ 1.24
SEMA3B-210ENST00000611067 TNS2Q63HR2 1409 aa22.79■■□□□ 1.24
SEMA3B-210ENST00000611067 GLI3P10071 1580 aa22.79■■□□□ 1.24
SEMA3B-210ENST00000611067 AIMP1Q12904 312 aaKnown RBP22.79■■□□□ 1.24
SEMA3B-210ENST00000611067 TSC1Q92574 1164 aa22.79■■□□□ 1.24
SEMA3B-210ENST00000611067 USP44Q9H0E7 712 aa22.79■■□□□ 1.24
SEMA3B-210ENST00000611067 SLIT2O94813 1529 aa22.79■■□□□ 1.24
SEMA3B-210ENST00000611067 CCDC9Q9Y3X0 531 aaKnown RBP22.78■■□□□ 1.24
SEMA3B-210ENST00000611067 ZSCAN20P17040 1043 aaPredicted RBP22.78■■□□□ 1.24
SEMA3B-210ENST00000611067 C17orf53Q8N3J3 647 aaPredicted RBP22.78■■□□□ 1.24
SEMA3B-210ENST00000611067 CERKQ8TCT0 537 aa22.78■■□□□ 1.24
SEMA3B-210ENST00000611067 FUCA2Q9BTY2 467 aa22.78■■□□□ 1.24
SEMA3B-210ENST00000611067 KCPQ6ZWJ8 1503 aa22.77■■□□□ 1.24
SEMA3B-210ENST00000611067 IL25Q9H293 177 aa22.77■■□□□ 1.24
SEMA3B-210ENST00000611067 STX6O43752 255 aa22.77■■□□□ 1.23
SEMA3B-210ENST00000611067 ATP6V1DQ9Y5K8 247 aa22.77■■□□□ 1.23
SEMA3B-210ENST00000611067 PTCD1O75127 700 aaKnown RBP22.76■■□□□ 1.23
SEMA3B-210ENST00000611067 TTC14Q96N46 770 aa22.76■■□□□ 1.23
SEMA3B-210ENST00000611067 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.76■■□□□ 1.23
SEMA3B-210ENST00000611067 TPM3P06753 285 aa22.75■■□□□ 1.23
SEMA3B-210ENST00000611067 LRRFIP2Q9Y608 721 aaKnown RBP22.75■■□□□ 1.23
SEMA3B-210ENST00000611067 SPATA31A5Q5VU36 1347 aa22.75■■□□□ 1.23
SEMA3B-210ENST00000611067 SPATA31A7Q8IWB4 1347 aa22.75■■□□□ 1.23
SEMA3B-210ENST00000611067 LRP6O75581 1613 aa22.75■■□□□ 1.23
SEMA3B-210ENST00000611067 F13A1P00488 732 aa22.75■■□□□ 1.23
SEMA3B-210ENST00000611067 SYT1P21579 422 aa22.75■■□□□ 1.23
SEMA3B-210ENST00000611067 RIC3Q7Z5B4 369 aa22.75■■□□□ 1.23
SEMA3B-210ENST00000611067 KIAA1524Q8TCG1 905 aa22.75■■□□□ 1.23
SEMA3B-210ENST00000611067 XAGE3Q8WTP9 111 aa22.75■■□□□ 1.23
SEMA3B-210ENST00000611067 RAD50Q92878 1312 aa22.75■■□□□ 1.23
SEMA3B-210ENST00000611067 ALDH1L1O75891 902 aa22.74■■□□□ 1.23
SEMA3B-210ENST00000611067 DDB1Q16531 1140 aa22.74■■□□□ 1.23
SEMA3B-210ENST00000611067 ITGB4P16144 1822 aa22.74■■□□□ 1.23
SEMA3B-210ENST00000611067 COPS6Q7L5N1 327 aa22.74■■□□□ 1.23
SEMA3B-210ENST00000611067 BCL2L12Q9HB09 334 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms