RNA–Protein interactions for RNA: ENST00000610553.1

EWSR1-221, Transcript of EWS RNA binding protein 1, humanhuman

TSL 2

Gene EWSR1, Length 2,300 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-221ENST00000610553 HEG1Q9ULI3 1381 aa20.36■□□□□ 0.85
EWSR1-221ENST00000610553 PXDNQ92626 1479 aa20.35■□□□□ 0.85
EWSR1-221ENST00000610553 GTF2F1P35269 517 aaKnown RBP eCLIP20.35■□□□□ 0.85
EWSR1-221ENST00000610553 PROSER3Q2NL68 480 aa20.35■□□□□ 0.85
EWSR1-221ENST00000610553 KSR2Q6VAB6 950 aa20.35■□□□□ 0.85
EWSR1-221ENST00000610553 HMGN5P82970 282 aaKnown RBP20.35■□□□□ 0.85
EWSR1-221ENST00000610553 NECAB1Q8N987 351 aa20.35■□□□□ 0.85
EWSR1-221ENST00000610553 FAM227BQ96M60 508 aa20.35■□□□□ 0.85
EWSR1-221ENST00000610553 HDAC5Q9UQL6 1122 aa20.35■□□□□ 0.85
EWSR1-221ENST00000610553 HIP1O00291 1037 aa20.34■□□□□ 0.85
EWSR1-221ENST00000610553 PDIA4P13667 645 aaKnown RBP20.34■□□□□ 0.85
EWSR1-221ENST00000610553 MPRIPQ6WCQ1 1025 aa20.34■□□□□ 0.85
EWSR1-221ENST00000610553 C17orf53Q8N3J3 647 aaPredicted RBP20.34■□□□□ 0.85
EWSR1-221ENST00000610553 ELP1O95163 1332 aa20.34■□□□□ 0.85
EWSR1-221ENST00000610553 GIGYF1O75420 1035 aaPredicted RBP20.33■□□□□ 0.85
EWSR1-221ENST00000610553 CWF19L2Q2TBE0 894 aaKnown RBP20.33■□□□□ 0.85
EWSR1-221ENST00000610553 TTC6Q86TZ1 520 aa20.33■□□□□ 0.85
EWSR1-221ENST00000610553 DDX54Q8TDD1 881 aaKnown RBP20.33■□□□□ 0.85
EWSR1-221ENST00000610553 PHF8Q9UPP1 1060 aa20.33■□□□□ 0.85
EWSR1-221ENST00000610553 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.33■□□□□ 0.85
EWSR1-221ENST00000610553 NPHP4O75161 1426 aaPredicted RBP20.33■□□□□ 0.85
EWSR1-221ENST00000610553 SASH1O94885 1247 aa20.33■□□□□ 0.84
EWSR1-221ENST00000610553 CCDC192P0DO97 292 aa20.33■□□□□ 0.84
EWSR1-221ENST00000610553 NMIQ13287 307 aaPredicted RBP20.33■□□□□ 0.84
EWSR1-221ENST00000610553 COL9A3Q14050 684 aaPredicted RBP20.33■□□□□ 0.84
EWSR1-221ENST00000610553 UTYO14607 1347 aa20.33■□□□□ 0.84
EWSR1-221ENST00000610553 SLC27A2O14975 620 aa20.32■□□□□ 0.84
EWSR1-221ENST00000610553 KRT85P78386 507 aa20.32■□□□□ 0.84
EWSR1-221ENST00000610553 CDC37L1Q7L3B6 337 aa20.32■□□□□ 0.84
EWSR1-221ENST00000610553 EAF2Q96CJ1 260 aaPredicted RBP20.32■□□□□ 0.84
EWSR1-221ENST00000610553 KAZALD1Q96I82 304 aa20.32■□□□□ 0.84
EWSR1-221ENST00000610553 RNMTO43148 476 aaKnown RBP20.32■□□□□ 0.84
EWSR1-221ENST00000610553 PSMA5P28066 241 aa20.32■□□□□ 0.84
EWSR1-221ENST00000610553 PLEKHO1Q53GL0 409 aaPredicted RBP20.32■□□□□ 0.84
EWSR1-221ENST00000610553 LARP1BQ659C4 914 aaKnown RBP20.32■□□□□ 0.84
EWSR1-221ENST00000610553 JCADQ9P266 1359 aa20.31■□□□□ 0.84
EWSR1-221ENST00000610553 MED23Q9ULK4 1368 aa20.31■□□□□ 0.84
EWSR1-221ENST00000610553 ZBTB7CA1YPR0 619 aa20.31■□□□□ 0.84
EWSR1-221ENST00000610553 LRRC59Q96AG4 307 aaKnown RBP20.31■□□□□ 0.84
EWSR1-221ENST00000610553 SUCLG2Q96I99 432 aa20.31■□□□□ 0.84
EWSR1-221ENST00000610553 KCNF1Q9H3M0 494 aa20.31■□□□□ 0.84
EWSR1-221ENST00000610553 SIPA1L3O60292 1781 aaPredicted RBP20.31■□□□□ 0.84
EWSR1-221ENST00000610553 GRM8O00222 908 aa20.31■□□□□ 0.84
EWSR1-221ENST00000610553 KCNJ4P48050 445 aa20.31■□□□□ 0.84
EWSR1-221ENST00000610553 LINS1Q8NG48 757 aa20.31■□□□□ 0.84
EWSR1-221ENST00000610553 KIAA1524Q8TCG1 905 aa20.31■□□□□ 0.84
EWSR1-221ENST00000610553 MRC1P22897 1456 aa20.3■□□□□ 0.84
EWSR1-221ENST00000610553 A0A0D9SFI3 127 aa20.3■□□□□ 0.84
EWSR1-221ENST00000610553 PDCP20941 246 aa20.3■□□□□ 0.84
EWSR1-221ENST00000610553 PLCB2Q00722 1185 aa20.3■□□□□ 0.84
EWSR1-221ENST00000610553 AMOTQ4VCS5 1084 aa20.3■□□□□ 0.84
EWSR1-221ENST00000610553 FAM200AQ8TCP9 573 aa20.3■□□□□ 0.84
EWSR1-221ENST00000610553 ALDH8A1Q9H2A2 487 aaPredicted RBP20.3■□□□□ 0.84
EWSR1-221ENST00000610553 BICC1Q9H694 974 aaKnown RBP20.3■□□□□ 0.84
EWSR1-221ENST00000610553 TPM3P06753 285 aa20.29■□□□□ 0.84
EWSR1-221ENST00000610553 TLR7Q9NYK1 1049 aaKnown RBP20.29■□□□□ 0.84
EWSR1-221ENST00000610553 ANKRD1Q15327 319 aa20.28■□□□□ 0.84
EWSR1-221ENST00000610553 MAP3K11Q16584 847 aa20.28■□□□□ 0.84
EWSR1-221ENST00000610553 KCNH5Q8NCM2 988 aa20.28■□□□□ 0.84
EWSR1-221ENST00000610553 NUP62CLQ9H1M0 184 aa20.28■□□□□ 0.84
EWSR1-221ENST00000610553 PRAMEF22A3QJZ6 481 aa20.28■□□□□ 0.84
EWSR1-221ENST00000610553 LIG1P18858 919 aa20.28■□□□□ 0.84
EWSR1-221ENST00000610553 RNF20Q5VTR2 975 aa20.28■□□□□ 0.84
EWSR1-221ENST00000610553 BLOC1S2Q6QNY1 142 aa20.28■□□□□ 0.84
EWSR1-221ENST00000610553 FERMT3Q86UX7 667 aa20.28■□□□□ 0.84
EWSR1-221ENST00000610553 JARID2Q92833 1246 aaPredicted RBP20.28■□□□□ 0.84
EWSR1-221ENST00000610553 CCDC8Q9H0W5 538 aaPredicted RBP20.28■□□□□ 0.84
EWSR1-221ENST00000610553 RPS6KB1P23443 525 aa20.27■□□□□ 0.84
EWSR1-221ENST00000610553 G3BP1Q13283 466 aaKnown RBP eCLIP20.27■□□□□ 0.849e-9■□□□□ 10.4
EWSR1-221ENST00000610553 C1orf141Q5JVX7 400 aa20.27■□□□□ 0.84
EWSR1-221ENST00000610553 ZNF710Q8N1W2 664 aa20.27■□□□□ 0.84
EWSR1-221ENST00000610553 PYCARDQ9ULZ3 195 aa20.27■□□□□ 0.84
EWSR1-221ENST00000610553 MRVI1Q9Y6F6 885 aa20.27■□□□□ 0.84
EWSR1-221ENST00000610553 TOB2Q14106 344 aaPredicted RBP20.27■□□□□ 0.84
EWSR1-221ENST00000610553 FAM173BQ6P4H8 233 aa20.27■□□□□ 0.84
EWSR1-221ENST00000610553 TAF6LQ9Y6J9 622 aa20.27■□□□□ 0.84
EWSR1-221ENST00000610553 ADAMTS7Q9UKP4 1686 aa20.27■□□□□ 0.83
EWSR1-221ENST00000610553 CAMTA1Q9Y6Y1 1673 aa20.27■□□□□ 0.83
EWSR1-221ENST00000610553 TYRO3Q06418 890 aa20.26■□□□□ 0.83
EWSR1-221ENST00000610553 FSD1Q9BTV5 496 aa20.26■□□□□ 0.83
EWSR1-221ENST00000610553 LMTK3Q96Q04 1460 aa20.26■□□□□ 0.83
EWSR1-221ENST00000610553 TSGA10IPQ3SY00 556 aa20.26■□□□□ 0.83
EWSR1-221ENST00000610553 TCEANC2Q96MN5 208 aa20.26■□□□□ 0.83
EWSR1-221ENST00000610553 SCAND2PQ9GZW5 306 aaPredicted RBP20.26■□□□□ 0.83
EWSR1-221ENST00000610553 GOLGA6L6A8MZA4 724 aa20.25■□□□□ 0.83
EWSR1-221ENST00000610553 TSC1Q92574 1164 aa20.25■□□□□ 0.83
EWSR1-221ENST00000610553 BOLA2Q9H3K6 86 aa20.25■□□□□ 0.83
EWSR1-221ENST00000610553 HMG20BQ9P0W2 317 aa20.25■□□□□ 0.83
EWSR1-221ENST00000610553 NPHP3Q7Z494 1330 aa20.25■□□□□ 0.83
EWSR1-221ENST00000610553 RBM43Q6ZSC3 357 aaKnown RBP20.25■□□□□ 0.83
EWSR1-221ENST00000610553 ZNF589Q86UQ0 364 aaPredicted RBP20.25■□□□□ 0.83
EWSR1-221ENST00000610553 CCDC94Q9BW85 323 aaPredicted RBP20.25■□□□□ 0.83
EWSR1-221ENST00000610553 KIF3AQ9Y496 699 aa20.25■□□□□ 0.83
EWSR1-221ENST00000610553 DDX58O95786 925 aaKnown RBP20.24■□□□□ 0.83
EWSR1-221ENST00000610553 SPC24Q8NBT2 197 aa20.24■□□□□ 0.83
EWSR1-221ENST00000610553 DDX21Q9NR30 783 aaKnown RBP eCLIP20.24■□□□□ 0.83
EWSR1-221ENST00000610553 CAMK4Q16566 473 aa20.24■□□□□ 0.83
EWSR1-221ENST00000610553 LARP1Q6PKG0 1096 aaKnown RBP20.24■□□□□ 0.83
EWSR1-221ENST00000610553 DACT1Q9NYF0 836 aa20.24■□□□□ 0.83
EWSR1-221ENST00000610553 IGKV5-2P06315 115 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms