RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 NLRP10Q86W26 655 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 SYNE4Q8N205 404 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 TTLL6Q8N841 843 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 ZNF622Q969S3 477 aaKnown RBP eCLIP16.45■□□□□ 0.22
CD9-212ENST00000610354 ZNF428Q96B54 188 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 ISCA1Q9BUE6 129 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 NYXQ9GZU5 481 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 SBF1O95248 1867 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 GOLGA2Q08379 1002 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 PARP10Q53GL7 1025 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 PDZRN3Q9UPQ7 1066 aa16.45■□□□□ 0.22
CD9-212ENST00000610354 CACNA1FO60840 1977 aa16.44■□□□□ 0.22
CD9-212ENST00000610354 LAMB2P55268 1798 aa16.44■□□□□ 0.22
CD9-212ENST00000610354 RIC1Q4ADV7 1423 aa16.44■□□□□ 0.22
CD9-212ENST00000610354 HSP90AB3PQ58FF7 597 aa16.44■□□□□ 0.22
CD9-212ENST00000610354 STYK1Q6J9G0 422 aa16.44■□□□□ 0.22
CD9-212ENST00000610354 MASTLQ96GX5 879 aa16.44■□□□□ 0.22
CD9-212ENST00000610354 ATP5J2-PTCD1G3V325 749 aa16.43■□□□□ 0.22
CD9-212ENST00000610354 GTF2E1P29083 439 aaPredicted RBP16.43■□□□□ 0.22
CD9-212ENST00000610354 SLC10A5Q5PT55 438 aa16.43■□□□□ 0.22
CD9-212ENST00000610354 PPP1R42Q7Z4L9 355 aa16.43■□□□□ 0.22
CD9-212ENST00000610354 UTP14AQ9BVJ6 771 aaKnown RBP16.43■□□□□ 0.22
CD9-212ENST00000610354 MYH16Q9H6N6 1097 aa16.43■□□□□ 0.22
CD9-212ENST00000610354 ADCY9O60503 1353 aa16.42■□□□□ 0.22
CD9-212ENST00000610354 SLC4A2P04920 1241 aa16.42■□□□□ 0.22
CD9-212ENST00000610354 PRELPP51888 382 aa16.42■□□□□ 0.22
CD9-212ENST00000610354 CRY2Q49AN0 593 aa16.42■□□□□ 0.22
CD9-212ENST00000610354 RIC3Q7Z5B4 369 aa16.42■□□□□ 0.22
CD9-212ENST00000610354 ZNF784Q8NCA9 323 aaPredicted RBP16.42■□□□□ 0.22
CD9-212ENST00000610354 C7orf43Q8WVR3 580 aa16.42■□□□□ 0.22
CD9-212ENST00000610354 CDCA7LQ96GN5 454 aa16.42■□□□□ 0.22
CD9-212ENST00000610354 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
CD9-212ENST00000610354 FER1L6Q2WGJ9 1857 aa16.41■□□□□ 0.22
CD9-212ENST00000610354 CCDC88AQ3V6T2 1871 aa16.41■□□□□ 0.22
CD9-212ENST00000610354 DDX60Q8IY21 1712 aaKnown RBP16.41■□□□□ 0.22
CD9-212ENST00000610354 NPR1P16066 1061 aa16.41■□□□□ 0.22
CD9-212ENST00000610354 RASSF7Q02833 373 aa16.41■□□□□ 0.22
CD9-212ENST00000610354 SLFN5Q08AF3 891 aa16.41■□□□□ 0.22
CD9-212ENST00000610354 TRIM28Q13263 835 aaKnown RBP16.41■□□□□ 0.22
CD9-212ENST00000610354 CHMP4AQ9BY43 222 aa16.41■□□□□ 0.22
CD9-212ENST00000610354 C21orf2O43822 256 aa16.4■□□□□ 0.22
CD9-212ENST00000610354 PRPF40BQ6NWY9 871 aaKnown RBP16.4■□□□□ 0.22
CD9-212ENST00000610354 CNKSR1Q969H4 720 aa16.4■□□□□ 0.22
CD9-212ENST00000610354 MYD88Q99836 296 aa16.4■□□□□ 0.22
CD9-212ENST00000610354 STK31Q9BXU1 1019 aa16.4■□□□□ 0.22
CD9-212ENST00000610354 TRMT112Q9UI30 125 aaKnown RBP16.4■□□□□ 0.22
CD9-212ENST00000610354 PI4KAP2A4QPH2 592 aa16.39■□□□□ 0.21
CD9-212ENST00000610354 NFKBIEO00221 500 aa16.39■□□□□ 0.21
CD9-212ENST00000610354 HCLS1P14317 486 aaPredicted RBP16.39■□□□□ 0.21
CD9-212ENST00000610354 OLFM4Q6UX06 510 aa16.39■□□□□ 0.21
CD9-212ENST00000610354 KSR2Q6VAB6 950 aa16.39■□□□□ 0.21
CD9-212ENST00000610354 SLC51AQ86UW1 340 aa16.39■□□□□ 0.21
CD9-212ENST00000610354 TRMT2AQ8IZ69 625 aaKnown RBP16.39■□□□□ 0.21
CD9-212ENST00000610354 PI4KAP1Q8N8J0 262 aa16.39■□□□□ 0.21
CD9-212ENST00000610354 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
CD9-212ENST00000610354 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
CD9-212ENST00000610354 TAF1P21675 1872 aa16.38■□□□□ 0.21
CD9-212ENST00000610354 RNF123Q5XPI4 1314 aa16.38■□□□□ 0.21
CD9-212ENST00000610354 HOXA10P31260 410 aaPredicted RBP16.38■□□□□ 0.21
CD9-212ENST00000610354 FAM89AQ96GI7 184 aa16.38■□□□□ 0.21
CD9-212ENST00000610354 SH3TC1Q8TE82 1336 aa16.37■□□□□ 0.21
CD9-212ENST00000610354 E9PSI1 815 aa16.37■□□□□ 0.21
CD9-212ENST00000610354 IGKV5-2P06315 115 aa16.37■□□□□ 0.21
CD9-212ENST00000610354 FLIIQ13045 1269 aa16.37■□□□□ 0.21
CD9-212ENST00000610354 C9orf131Q5VYM1 1079 aa16.37■□□□□ 0.21
CD9-212ENST00000610354 DDX58O95786 925 aaKnown RBP16.36■□□□□ 0.21
CD9-212ENST00000610354 RTL5Q5HYW3 569 aaPredicted RBP16.36■□□□□ 0.21
CD9-212ENST00000610354 SNED1Q8TER0 1413 aa16.35■□□□□ 0.21
CD9-212ENST00000610354 JARID2Q92833 1246 aaPredicted RBP16.35■□□□□ 0.21
CD9-212ENST00000610354 NLRP3Q96P20 1036 aa16.35■□□□□ 0.21
CD9-212ENST00000610354 COL4A1P02462 1669 aa16.35■□□□□ 0.21
CD9-212ENST00000610354 DICER1Q9UPY3 1922 aaKnown RBP16.34■□□□□ 0.21
CD9-212ENST00000610354 ALDH1B1P30837 517 aa16.34■□□□□ 0.21
CD9-212ENST00000610354 CCDC191Q8NCU4 936 aa16.34■□□□□ 0.21
CD9-212ENST00000610354 RPGRQ92834 1020 aaKnown RBP16.34■□□□□ 0.21
CD9-212ENST00000610354 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
CD9-212ENST00000610354 CWF19L2Q2TBE0 894 aaKnown RBP16.33■□□□□ 0.2
CD9-212ENST00000610354 ZBTB38Q8NAP3 1195 aaPredicted RBP16.33■□□□□ 0.2
CD9-212ENST00000610354 RBM17Q96I25 401 aaKnown RBP16.33■□□□□ 0.2
CD9-212ENST00000610354 RNF181Q9P0P0 153 aa16.33■□□□□ 0.2
CD9-212ENST00000610354 ABCC4O15439 1325 aa16.32■□□□□ 0.2
CD9-212ENST00000610354 IRS4O14654 1257 aaPredicted RBP16.32■□□□□ 0.2
CD9-212ENST00000610354 PCCAP05165 728 aaPredicted RBP16.32■□□□□ 0.2
CD9-212ENST00000610354 FKBP5Q13451 457 aaPredicted RBP16.32■□□□□ 0.2
CD9-212ENST00000610354 MRPL50Q8N5N7 158 aaKnown RBP16.32■□□□□ 0.2
CD9-212ENST00000610354 CWC25Q9NXE8 425 aaPredicted RBP16.32■□□□□ 0.2
CD9-212ENST00000610354 LTBP3Q9NS15 1303 aa16.32■□□□□ 0.2
CD9-212ENST00000610354 NEURL1BA8MQ27 555 aa16.31■□□□□ 0.2
CD9-212ENST00000610354 F6X3S4 739 aa16.31■□□□□ 0.2
CD9-212ENST00000610354 LMNB1P20700 586 aa16.31■□□□□ 0.2
CD9-212ENST00000610354 SF3B3Q15393 1217 aaKnown RBP16.31■□□□□ 0.2
CD9-212ENST00000610354 CCDC93Q567U6 631 aa16.31■□□□□ 0.2
CD9-212ENST00000610354 DNAAF4Q8WXU2 420 aa16.31■□□□□ 0.2
CD9-212ENST00000610354 TIAM2Q8IVF5 1701 aa16.3■□□□□ 0.2
CD9-212ENST00000610354 ZNF526Q8TF50 670 aaPredicted RBP16.3■□□□□ 0.2
CD9-212ENST00000610354 SSH1Q8WYL5 1049 aa16.3■□□□□ 0.2
CD9-212ENST00000610354 PPEF1O14829 653 aaPredicted RBP16.29■□□□□ 0.2
CD9-212ENST00000610354 SOGA3Q5TF21 947 aa16.29■□□□□ 0.2
CD9-212ENST00000610354 TAOK3Q9H2K8 898 aa16.29■□□□□ 0.2
CD9-212ENST00000610354 H7C1W4 665 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms