RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 HDAC1Q13547 482 aaPredicted RBP9.46□□□□□ -0.9
LMBR1-221ENST00000609774 RC3H1Q5TC82 1133 aaKnown RBP9.46□□□□□ -0.9
LMBR1-221ENST00000609774 MPRIPQ6WCQ1 1025 aa9.46□□□□□ -0.9
LMBR1-221ENST00000609774 DZIP1LQ8IYY4 767 aaKnown RBP9.46□□□□□ -0.9
LMBR1-221ENST00000609774 LINC00116Q8NCU8 138 aa9.46□□□□□ -0.9
LMBR1-221ENST00000609774 SMC1BQ8NDV3 1235 aa9.46□□□□□ -0.9
LMBR1-221ENST00000609774 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.9
LMBR1-221ENST00000609774 DCAF5Q96JK2 942 aa9.46□□□□□ -0.9
LMBR1-221ENST00000609774 GBP4Q96PP9 640 aa9.46□□□□□ -0.9
LMBR1-221ENST00000609774 TBC1D2Q9BYX2 928 aa9.46□□□□□ -0.9
LMBR1-221ENST00000609774 C22orf23Q9BZE7 217 aa9.46□□□□□ -0.9
LMBR1-221ENST00000609774 KIF16BQ96L93 1317 aa9.46□□□□□ -0.9
LMBR1-221ENST00000609774 COL5A3P25940 1745 aaPredicted RBP9.45□□□□□ -0.9
LMBR1-221ENST00000609774 C16orf71Q8IYS4 520 aaPredicted RBP9.45□□□□□ -0.9
LMBR1-221ENST00000609774 IL16Q14005 1332 aa9.45□□□□□ -0.9
LMBR1-221ENST00000609774 KDRP35968 1356 aa9.45□□□□□ -0.9
LMBR1-221ENST00000609774 A0A0G2JLW4 131 aa9.44□□□□□ -0.9
LMBR1-221ENST00000609774 FSD2A1L4K1 749 aa9.44□□□□□ -0.9
LMBR1-221ENST00000609774 HTRA3P83110 453 aa9.44□□□□□ -0.9
LMBR1-221ENST00000609774 ITPK1Q13572 414 aa9.44□□□□□ -0.9
LMBR1-221ENST00000609774 C9orf131Q5VYM1 1079 aa9.44□□□□□ -0.9
LMBR1-221ENST00000609774 ARHGAP27Q6ZUM4 889 aa9.44□□□□□ -0.9
LMBR1-221ENST00000609774 ZNF428Q96B54 188 aa9.44□□□□□ -0.9
LMBR1-221ENST00000609774 CARD14Q9BXL6 1004 aa9.44□□□□□ -0.9
LMBR1-221ENST00000609774 BCS1LQ9Y276 419 aa9.44□□□□□ -0.9
LMBR1-221ENST00000609774 KCPQ6ZWJ8 1503 aa9.44□□□□□ -0.9
LMBR1-221ENST00000609774 ANKRD26Q9UPS8 1709 aa9.43□□□□□ -0.9
LMBR1-221ENST00000609774 FLT4P35916 1363 aa9.43□□□□□ -0.9
LMBR1-221ENST00000609774 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.43□□□□□ -0.9
LMBR1-221ENST00000609774 G3V3G9 751 aa9.43□□□□□ -0.9
LMBR1-221ENST00000609774 GOLGA6L22H0YM25 854 aa9.43□□□□□ -0.9
LMBR1-221ENST00000609774 TRAK2O60296 914 aa9.43□□□□□ -0.9
LMBR1-221ENST00000609774 PHF14O94880 888 aa9.43□□□□□ -0.9
LMBR1-221ENST00000609774 DPEP1P16444 411 aa9.43□□□□□ -0.9
LMBR1-221ENST00000609774 CLCN1P35523 988 aa9.43□□□□□ -0.9
LMBR1-221ENST00000609774 MICALL2Q8IY33 904 aa9.43□□□□□ -0.9
LMBR1-221ENST00000609774 ANP32BQ92688 251 aaKnown RBP9.43□□□□□ -0.9
LMBR1-221ENST00000609774 SNX21Q969T3 373 aa9.43□□□□□ -0.9
LMBR1-221ENST00000609774 ZFP91Q96JP5 570 aaPredicted RBP9.43□□□□□ -0.9
LMBR1-221ENST00000609774 CCDC87Q9NVE4 849 aa9.43□□□□□ -0.9
LMBR1-221ENST00000609774 WWC3Q9ULE0 1092 aa9.43□□□□□ -0.9
LMBR1-221ENST00000609774 CNTNAP4Q9C0A0 1308 aa9.42□□□□□ -0.9
LMBR1-221ENST00000609774 FYB1O15117 783 aa9.42□□□□□ -0.9
LMBR1-221ENST00000609774 GNPATO15228 680 aa9.42□□□□□ -0.9
LMBR1-221ENST00000609774 FCHSD2O94868 740 aa9.42□□□□□ -0.9
LMBR1-221ENST00000609774 HSPA1AP0DMV8 641 aaKnown RBP9.42□□□□□ -0.9
LMBR1-221ENST00000609774 HSPA1BP0DMV9 641 aaKnown RBP9.42□□□□□ -0.9
LMBR1-221ENST00000609774 GYS1P13807 737 aa9.42□□□□□ -0.9
LMBR1-221ENST00000609774 TRAPPC3LQ5T215 181 aa9.42□□□□□ -0.9
LMBR1-221ENST00000609774 TRIM44Q96DX7 344 aaPredicted RBP9.42□□□□□ -0.9
LMBR1-221ENST00000609774 PIM2Q9P1W9 311 aa9.42□□□□□ -0.9
LMBR1-221ENST00000609774 PCDHB15Q9Y5E8 787 aa9.42□□□□□ -0.9
LMBR1-221ENST00000609774 MYH14Q7Z406 1995 aaKnown RBP9.42□□□□□ -0.9
LMBR1-221ENST00000609774 HOXB1P14653 301 aaPredicted RBP9.41□□□□□ -0.9
LMBR1-221ENST00000609774 FBLN1P23142 703 aa9.41□□□□□ -0.9
LMBR1-221ENST00000609774 SMIM5Q71RC9 77 aa9.41□□□□□ -0.9
LMBR1-221ENST00000609774 RRAGCQ9HB90 399 aa9.41□□□□□ -0.9
LMBR1-221ENST00000609774 ATG3Q9NT62 314 aa9.41□□□□□ -0.9
LMBR1-221ENST00000609774 SMC4Q9NTJ3 1288 aa9.41□□□□□ -0.9
LMBR1-221ENST00000609774 RTCBQ9Y3I0 505 aaKnown RBP9.41□□□□□ -0.9
LMBR1-221ENST00000609774 DLEC1Q9Y238 1755 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 ADAMTS7Q9UKP4 1686 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 GLTPD2A6NH11 291 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 RIOK3O14730 519 aaKnown RBP9.4□□□□□ -0.9
LMBR1-221ENST00000609774 RPS6KA4O75676 772 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 HSP90AA1P07900 732 aaKnown RBP9.4□□□□□ -0.9
LMBR1-221ENST00000609774 HSP90AB1P08238 724 aaKnown RBP9.4□□□□□ -0.9
LMBR1-221ENST00000609774 U2AF1L5P0DN76 240 aaPredicted RBP9.4□□□□□ -0.9
LMBR1-221ENST00000609774 VEGFAP15692 232 aaPredicted RBP9.4□□□□□ -0.9
LMBR1-221ENST00000609774 ATP6V1AP38606 617 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 RBM25P49756 843 aaKnown RBP9.4□□□□□ -0.9
LMBR1-221ENST00000609774 MTHFSP49914 203 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 MFAP1P55081 439 aaKnown RBP9.4□□□□□ -0.9
LMBR1-221ENST00000609774 U2AF1Q01081 240 aaKnown RBP eCLIP9.4□□□□□ -0.9
LMBR1-221ENST00000609774 CALD1Q05682 793 aaKnown RBP9.4□□□□□ -0.9
LMBR1-221ENST00000609774 NEUROD2Q15784 382 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 HSP90AB2PQ58FF8 381 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 DALRD3Q5D0E6 543 aaKnown RBP9.4□□□□□ -0.9
LMBR1-221ENST00000609774 USHBP1Q8N6Y0 703 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 ARHGEF1Q92888 912 aaKnown RBP9.4□□□□□ -0.9
LMBR1-221ENST00000609774 NAP1L5Q96NT1 182 aaPredicted RBP9.4□□□□□ -0.9
LMBR1-221ENST00000609774 PRDM10Q9NQV6 1147 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 TMOD3Q9NYL9 352 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 ASAP1Q9ULH1 1129 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 SPG7Q9UQ90 795 aa9.4□□□□□ -0.9
LMBR1-221ENST00000609774 RRP9O43818 475 aaKnown RBP9.39□□□□□ -0.91
LMBR1-221ENST00000609774 XRCC6P12956 609 aaKnown RBP eCLIP9.39□□□□□ -0.91
LMBR1-221ENST00000609774 RRS1Q15050 365 aaKnown RBP9.39□□□□□ -0.91
LMBR1-221ENST00000609774 ALDH1L2Q3SY69 923 aa9.39□□□□□ -0.91
LMBR1-221ENST00000609774 ATF7IPQ6VMQ6 1270 aa9.39□□□□□ -0.91
LMBR1-221ENST00000609774 SMC5Q8IY18 1101 aa9.39□□□□□ -0.91
LMBR1-221ENST00000609774 SLC4A9Q96Q91 983 aa9.39□□□□□ -0.91
LMBR1-221ENST00000609774 GRPEL1Q9HAV7 217 aa9.39□□□□□ -0.91
LMBR1-221ENST00000609774 RNF181Q9P0P0 153 aa9.39□□□□□ -0.91
LMBR1-221ENST00000609774 NRXN2Q9P2S2 1712 aa9.39□□□□□ -0.91
LMBR1-221ENST00000609774 KIF20BQ96Q89 1820 aa9.38□□□□□ -0.91
LMBR1-221ENST00000609774 ERVV-2B6SEH9 535 aa9.38□□□□□ -0.91
LMBR1-221ENST00000609774 TPM2P07951 284 aa9.38□□□□□ -0.91
LMBR1-221ENST00000609774 PHKG2P15735 406 aa9.38□□□□□ -0.91
LMBR1-221ENST00000609774 ITPRIPQ8IWB1 547 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms