RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 NUTM1Q86Y26 1132 aa19.52■□□□□ 0.72
LMBR1-220ENST00000609081 ABCC12Q96J65 1359 aa19.52■□□□□ 0.72
LMBR1-220ENST00000609081 DICER1Q9UPY3 1922 aaKnown RBP19.51■□□□□ 0.71
LMBR1-220ENST00000609081 SLC10A5Q5PT55 438 aa19.51■□□□□ 0.71
LMBR1-220ENST00000609081 CCDC30Q5VVM6 783 aa19.51■□□□□ 0.71
LMBR1-220ENST00000609081 TAOK3Q9H2K8 898 aa19.51■□□□□ 0.71
LMBR1-220ENST00000609081 TNRC6CQ9HCJ0 1690 aaKnown RBP19.5■□□□□ 0.71
LMBR1-220ENST00000609081 HOXA10P31260 410 aaPredicted RBP19.5■□□□□ 0.71
LMBR1-220ENST00000609081 RASSF7Q02833 373 aa19.5■□□□□ 0.71
LMBR1-220ENST00000609081 GRIPAP1Q4V328 841 aa19.5■□□□□ 0.71
LMBR1-220ENST00000609081 CCDC93Q567U6 631 aa19.5■□□□□ 0.71
LMBR1-220ENST00000609081 NLRP10Q86W26 655 aa19.5■□□□□ 0.71
LMBR1-220ENST00000609081 WDR63Q8IWG1 891 aa19.5■□□□□ 0.71
LMBR1-220ENST00000609081 C7orf43Q8WVR3 580 aa19.5■□□□□ 0.71
LMBR1-220ENST00000609081 RPGRQ92834 1020 aaKnown RBP19.5■□□□□ 0.71
LMBR1-220ENST00000609081 NLRP3Q96P20 1036 aa19.5■□□□□ 0.71
LMBR1-220ENST00000609081 GOLGA2Q08379 1002 aa19.49■□□□□ 0.71
LMBR1-220ENST00000609081 CC2D2BQ6DHV5 1058 aa19.49■□□□□ 0.71
LMBR1-220ENST00000609081 RTKN2Q8IZC4 609 aa19.49■□□□□ 0.71
LMBR1-220ENST00000609081 C8orf58Q8NAV2 365 aa19.49■□□□□ 0.71
LMBR1-220ENST00000609081 ELL2O00472 640 aaPredicted RBP19.48■□□□□ 0.71
LMBR1-220ENST00000609081 RBM17Q96I25 401 aaKnown RBP19.48■□□□□ 0.71
LMBR1-220ENST00000609081 CRAMP1Q96RY5 1269 aa19.48■□□□□ 0.71
LMBR1-220ENST00000609081 TIAM2Q8IVF5 1701 aa19.48■□□□□ 0.71
LMBR1-220ENST00000609081 TRIM28Q13263 835 aaKnown RBP19.47■□□□□ 0.71
LMBR1-220ENST00000609081 ZNF219Q9P2Y4 722 aaPredicted RBP19.47■□□□□ 0.71
LMBR1-220ENST00000609081 SH3TC1Q8TE82 1336 aa19.47■□□□□ 0.71
LMBR1-220ENST00000609081 CACNA1FO60840 1977 aa19.46■□□□□ 0.71
LMBR1-220ENST00000609081 KIF3CO14782 793 aa19.46■□□□□ 0.71
LMBR1-220ENST00000609081 DDX58O95786 925 aaKnown RBP19.46■□□□□ 0.71
LMBR1-220ENST00000609081 FAM9BQ8IZU0 186 aa19.46■□□□□ 0.71
LMBR1-220ENST00000609081 TRMT112Q9UI30 125 aaKnown RBP19.46■□□□□ 0.71
LMBR1-220ENST00000609081 DPY19L2Q6NUT2 758 aa19.45■□□□□ 0.7
LMBR1-220ENST00000609081 TSR2Q969E8 191 aaKnown RBP19.45■□□□□ 0.7
LMBR1-220ENST00000609081 ISCA1Q9BUE6 129 aa19.45■□□□□ 0.7
LMBR1-220ENST00000609081 STK31Q9BXU1 1019 aa19.45■□□□□ 0.7
LMBR1-220ENST00000609081 GLTPD2A6NH11 291 aa19.44■□□□□ 0.7
LMBR1-220ENST00000609081 HSP90B1P14625 803 aaKnown RBP19.44■□□□□ 0.7
LMBR1-220ENST00000609081 PRELPP51888 382 aa19.44■□□□□ 0.7
LMBR1-220ENST00000609081 FKBP4Q02790 459 aaKnown RBP eCLIP19.44■□□□□ 0.7
LMBR1-220ENST00000609081 TWISTNBQ3B726 338 aaPredicted RBP19.44■□□□□ 0.7
LMBR1-220ENST00000609081 RIC3Q7Z5B4 369 aa19.44■□□□□ 0.7
LMBR1-220ENST00000609081 TOMM70O94826 608 aa19.43■□□□□ 0.7
LMBR1-220ENST00000609081 TMX4Q9H1E5 349 aaPredicted RBP19.43■□□□□ 0.7
LMBR1-220ENST00000609081 TSPYL6Q8N831 410 aa19.42■□□□□ 0.7
LMBR1-220ENST00000609081 PSMD1Q99460 953 aa19.42■□□□□ 0.7
LMBR1-220ENST00000609081 PHAXQ9H814 394 aaKnown RBP19.42■□□□□ 0.7
LMBR1-220ENST00000609081 NMRK2Q9NPI5 230 aa19.42■□□□□ 0.7
LMBR1-220ENST00000609081 LAMB2P55268 1798 aa19.42■□□□□ 0.7
LMBR1-220ENST00000609081 C16orf71Q8IYS4 520 aaPredicted RBP19.41■□□□□ 0.7
LMBR1-220ENST00000609081 MYH16Q9H6N6 1097 aa19.41■□□□□ 0.7
LMBR1-220ENST00000609081 FANCIQ9NVI1 1328 aa19.41■□□□□ 0.7
LMBR1-220ENST00000609081 BBOX1O75936 387 aa19.4■□□□□ 0.7
LMBR1-220ENST00000609081 CCDC191Q8NCU4 936 aa19.4■□□□□ 0.7
LMBR1-220ENST00000609081 ATP5J2-PTCD1G3V325 749 aa19.39■□□□□ 0.69
LMBR1-220ENST00000609081 PPEF1O14829 653 aaPredicted RBP19.39■□□□□ 0.69
LMBR1-220ENST00000609081 VEGFAP15692 232 aaPredicted RBP19.39■□□□□ 0.69
LMBR1-220ENST00000609081 DDX46Q7L014 1031 aaKnown RBP19.39■□□□□ 0.69
LMBR1-220ENST00000609081 TMC4Q7Z404 712 aa19.39■□□□□ 0.69
LMBR1-220ENST00000609081 RBM46Q8TBY0 533 aaKnown RBP19.39■□□□□ 0.69
LMBR1-220ENST00000609081 SALL2Q9Y467 1007 aaPredicted RBP19.39■□□□□ 0.69
LMBR1-220ENST00000609081 SNED1Q8TER0 1413 aa19.39■□□□□ 0.69
LMBR1-220ENST00000609081 SENP3-EIF4A1A0A087X0R7 540 aa19.38■□□□□ 0.69
LMBR1-220ENST00000609081 HCLS1P14317 486 aaPredicted RBP19.38■□□□□ 0.69
LMBR1-220ENST00000609081 KSR2Q6VAB6 950 aa19.38■□□□□ 0.69
LMBR1-220ENST00000609081 C3orf67Q6ZVT6 689 aa19.38■□□□□ 0.69
LMBR1-220ENST00000609081 DDX60Q8IY21 1712 aaKnown RBP19.38■□□□□ 0.69
LMBR1-220ENST00000609081 ZBTB38Q8NAP3 1195 aaPredicted RBP19.38■□□□□ 0.69
LMBR1-220ENST00000609081 WDR90Q96KV7 1748 aa19.38■□□□□ 0.69
LMBR1-220ENST00000609081 METTL22Q9BUU2 404 aaPredicted RBP19.38■□□□□ 0.69
LMBR1-220ENST00000609081 VPS33BQ9H267 617 aa19.38■□□□□ 0.69
LMBR1-220ENST00000609081 ATP6V0A2Q9Y487 856 aa19.38■□□□□ 0.69
LMBR1-220ENST00000609081 CCER2I3L3R5 266 aa19.37■□□□□ 0.69
LMBR1-220ENST00000609081 IARSP41252 1262 aaKnown RBP19.37■□□□□ 0.69
LMBR1-220ENST00000609081 SF3B3Q15393 1217 aaKnown RBP19.37■□□□□ 0.69
LMBR1-220ENST00000609081 FAM89AQ96GI7 184 aa19.37■□□□□ 0.69
LMBR1-220ENST00000609081 RRAGCQ9HB90 399 aa19.37■□□□□ 0.69
LMBR1-220ENST00000609081 ABCC4O15439 1325 aa19.36■□□□□ 0.69
LMBR1-220ENST00000609081 SLC4A2P04920 1241 aa19.36■□□□□ 0.69
LMBR1-220ENST00000609081 NEXNQ0ZGT2 675 aa19.36■□□□□ 0.69
LMBR1-220ENST00000609081 FSTL1Q12841 308 aa19.36■□□□□ 0.69
LMBR1-220ENST00000609081 GRAPQ13588 217 aa19.36■□□□□ 0.69
LMBR1-220ENST00000609081 SYNE4Q8N205 404 aa19.36■□□□□ 0.69
LMBR1-220ENST00000609081 GRAPLQ8TC17 118 aaPredicted RBP19.36■□□□□ 0.69
LMBR1-220ENST00000609081 MYD88Q99836 296 aa19.36■□□□□ 0.69
LMBR1-220ENST00000609081 ZNF277Q9NRM2 450 aaPredicted RBP19.36■□□□□ 0.69
LMBR1-220ENST00000609081 CWC25Q9NXE8 425 aaPredicted RBP19.36■□□□□ 0.69
LMBR1-220ENST00000609081 IRS4O14654 1257 aaPredicted RBP19.35■□□□□ 0.69
LMBR1-220ENST00000609081 PCCAP05165 728 aaPredicted RBP19.35■□□□□ 0.69
LMBR1-220ENST00000609081 HSPA6P17066 643 aa19.35■□□□□ 0.69
LMBR1-220ENST00000609081 OLFM4Q6UX06 510 aa19.35■□□□□ 0.69
LMBR1-220ENST00000609081 SP8Q8IXZ3 490 aa19.35■□□□□ 0.69
LMBR1-220ENST00000609081 SUPT20HQ8NEM7 779 aa19.35■□□□□ 0.69
LMBR1-220ENST00000609081 JDP2Q8WYK2 163 aa19.35■□□□□ 0.69
LMBR1-220ENST00000609081 MAP3K2Q9Y2U5 619 aa19.35■□□□□ 0.69
LMBR1-220ENST00000609081 PI4KAP2A4QPH2 592 aa19.34■□□□□ 0.69
LMBR1-220ENST00000609081 VAMP4O75379 141 aa19.34■□□□□ 0.69
LMBR1-220ENST00000609081 EXOSC9Q06265 439 aaKnown RBP19.34■□□□□ 0.69
LMBR1-220ENST00000609081 PI4KAP1Q8N8J0 262 aa19.34■□□□□ 0.69
LMBR1-220ENST00000609081 ZNF521Q96K83 1311 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms