RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 USP25Q9UHP3 1055 aa17.49■□□□□ 0.39
CTCFL-219ENST00000608720 RBM8AQ9Y5S9 174 aaKnown RBP17.49■□□□□ 0.39
CTCFL-219ENST00000608720 GRM8O00222 908 aa17.48■□□□□ 0.39
CTCFL-219ENST00000608720 KIF20AO95235 890 aa17.48■□□□□ 0.39
CTCFL-219ENST00000608720 ADCY5O95622 1261 aa17.48■□□□□ 0.39
CTCFL-219ENST00000608720 HCLS1P14317 486 aaPredicted RBP17.48■□□□□ 0.39
CTCFL-219ENST00000608720 DNM1Q05193 864 aaKnown RBP17.48■□□□□ 0.39
CTCFL-219ENST00000608720 PROSER3Q2NL68 480 aa17.48■□□□□ 0.39
CTCFL-219ENST00000608720 CWF19L2Q2TBE0 894 aaKnown RBP17.48■□□□□ 0.39
CTCFL-219ENST00000608720 MYRIPQ8NFW9 859 aa17.48■□□□□ 0.39
CTCFL-219ENST00000608720 KDM4AO75164 1064 aa17.48■□□□□ 0.39
CTCFL-219ENST00000608720 GTF2F1P35269 517 aaKnown RBP eCLIP17.48■□□□□ 0.393e-6■■□□□ 13.2
CTCFL-219ENST00000608720 KCNJ4P48050 445 aa17.48■□□□□ 0.39
CTCFL-219ENST00000608720 FGD1P98174 961 aa17.48■□□□□ 0.39
CTCFL-219ENST00000608720 PRIMPOLQ96LW4 560 aa17.48■□□□□ 0.39
CTCFL-219ENST00000608720 ME3Q16798 604 aa17.47■□□□□ 0.39
CTCFL-219ENST00000608720 ESCO1Q5FWF5 840 aa17.47■□□□□ 0.39
CTCFL-219ENST00000608720 SUCLG2Q96I99 432 aa17.47■□□□□ 0.39
CTCFL-219ENST00000608720 FUCA2Q9BTY2 467 aa17.47■□□□□ 0.39
CTCFL-219ENST00000608720 LMO7Q8WWI1 1683 aa17.47■□□□□ 0.39
CTCFL-219ENST00000608720 LTN1O94822 1766 aa17.47■□□□□ 0.39
CTCFL-219ENST00000608720 SASH1O94885 1247 aa17.47■□□□□ 0.39
CTCFL-219ENST00000608720 NMIQ13287 307 aaPredicted RBP17.46■□□□□ 0.39
CTCFL-219ENST00000608720 ANKRD1Q15327 319 aa17.46■□□□□ 0.39
CTCFL-219ENST00000608720 RNF20Q5VTR2 975 aa17.46■□□□□ 0.39
CTCFL-219ENST00000608720 EAF2Q96CJ1 260 aaPredicted RBP17.46■□□□□ 0.39
CTCFL-219ENST00000608720 ALDH8A1Q9H2A2 487 aaPredicted RBP17.46■□□□□ 0.39
CTCFL-219ENST00000608720 DDX21Q9NR30 783 aaKnown RBP eCLIP17.46■□□□□ 0.39
CTCFL-219ENST00000608720 VPS37CA5D8V6 355 aaPredicted RBP17.45■□□□□ 0.38
CTCFL-219ENST00000608720 SLC27A2O14975 620 aa17.45■□□□□ 0.38
CTCFL-219ENST00000608720 PDCP20941 246 aa17.45■□□□□ 0.38
CTCFL-219ENST00000608720 HMGN5P82970 282 aaKnown RBP17.45■□□□□ 0.38
CTCFL-219ENST00000608720 ST3GAL1Q11201 340 aa17.45■□□□□ 0.38
CTCFL-219ENST00000608720 ARHGEF25Q86VW2 580 aa17.45■□□□□ 0.38
CTCFL-219ENST00000608720 PIBF1Q8WXW3 757 aa17.45■□□□□ 0.38
CTCFL-219ENST00000608720 TPCN1Q9ULQ1 816 aa17.45■□□□□ 0.38
CTCFL-219ENST00000608720 TPRNQ4KMQ1 711 aa17.45■□□□□ 0.38
CTCFL-219ENST00000608720 LARP1BQ659C4 914 aaKnown RBP17.45■□□□□ 0.38
CTCFL-219ENST00000608720 GIMAP6Q6P9H5 292 aa17.45■□□□□ 0.38
CTCFL-219ENST00000608720 KAZALD1Q96I82 304 aa17.45■□□□□ 0.38
CTCFL-219ENST00000608720 FAM227BQ96M60 508 aa17.45■□□□□ 0.38
CTCFL-219ENST00000608720 BICC1Q9H694 974 aaKnown RBP17.45■□□□□ 0.38
CTCFL-219ENST00000608720 GCP02774 474 aa17.44■□□□□ 0.38
CTCFL-219ENST00000608720 CCDC8Q9H0W5 538 aaPredicted RBP17.44■□□□□ 0.38
CTCFL-219ENST00000608720 NECAB1Q8N987 351 aa17.44■□□□□ 0.38
CTCFL-219ENST00000608720 KRT85P78386 507 aa17.43■□□□□ 0.38
CTCFL-219ENST00000608720 BLOC1S2Q6QNY1 142 aa17.43■□□□□ 0.38
CTCFL-219ENST00000608720 ANKRD24Q8TF21 1146 aa17.43■□□□□ 0.38
CTCFL-219ENST00000608720 PHRF1Q9P1Y6 1649 aaKnown RBP17.43■□□□□ 0.38
CTCFL-219ENST00000608720 PRAMEF22A3QJZ6 481 aa17.43■□□□□ 0.38
CTCFL-219ENST00000608720 NOLC1Q14978 699 aaKnown RBP eCLIP17.43■□□□□ 0.38
CTCFL-219ENST00000608720 LARP1Q6PKG0 1096 aaKnown RBP17.43■□□□□ 0.38
CTCFL-219ENST00000608720 FSD1Q9BTV5 496 aa17.43■□□□□ 0.38
CTCFL-219ENST00000608720 PXDNQ92626 1479 aa17.42■□□□□ 0.38
CTCFL-219ENST00000608720 CCDC192P0DO97 292 aa17.42■□□□□ 0.38
CTCFL-219ENST00000608720 ANKLE2Q86XL3 938 aa17.42■□□□□ 0.38
CTCFL-219ENST00000608720 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
CTCFL-219ENST00000608720 BOLA2Q9H3K6 86 aa17.42■□□□□ 0.38
CTCFL-219ENST00000608720 HMG20BQ9P0W2 317 aa17.42■□□□□ 0.38
CTCFL-219ENST00000608720 ELP1O95163 1332 aa17.42■□□□□ 0.38
CTCFL-219ENST00000608720 TPM3P06753 285 aa17.41■□□□□ 0.38
CTCFL-219ENST00000608720 AIMP1Q12904 312 aaKnown RBP17.41■□□□□ 0.38
CTCFL-219ENST00000608720 TSGA10IPQ3SY00 556 aa17.41■□□□□ 0.38
CTCFL-219ENST00000608720 DNTTIP2Q5QJE6 756 aaKnown RBP17.41■□□□□ 0.38
CTCFL-219ENST00000608720 ZNF830Q96NB3 372 aaPredicted RBP17.41■□□□□ 0.38
CTCFL-219ENST00000608720 A0A0D9SFI3 127 aa17.41■□□□□ 0.38
CTCFL-219ENST00000608720 RPS6KB1P23443 525 aa17.41■□□□□ 0.38
CTCFL-219ENST00000608720 PDIA6Q15084 440 aa17.41■□□□□ 0.38
CTCFL-219ENST00000608720 RIC3Q7Z5B4 369 aa17.41■□□□□ 0.38
CTCFL-219ENST00000608720 A0A0U1RQG5 324 aaPredicted RBP17.4■□□□□ 0.38
CTCFL-219ENST00000608720 NEXNQ0ZGT2 675 aa17.4■□□□□ 0.38
CTCFL-219ENST00000608720 TLR7Q9NYK1 1049 aaKnown RBP17.4■□□□□ 0.38
CTCFL-219ENST00000608720 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.4■□□□□ 0.38
CTCFL-219ENST00000608720 TCHHQ07283 1943 aa17.4■□□□□ 0.38
CTCFL-219ENST00000608720 IGKV5-2P06315 115 aa17.4■□□□□ 0.38
CTCFL-219ENST00000608720 TTC12Q9H892 705 aaPredicted RBP17.4■□□□□ 0.38
CTCFL-219ENST00000608720 SPTLC3Q9NUV7 552 aa17.4■□□□□ 0.38
CTCFL-219ENST00000608720 ZHX1Q9UKY1 873 aaPredicted RBP17.4■□□□□ 0.38
CTCFL-219ENST00000608720 MED23Q9ULK4 1368 aa17.4■□□□□ 0.38
CTCFL-219ENST00000608720 ZNF142P52746 1687 aaPredicted RBP17.4■□□□□ 0.38
CTCFL-219ENST00000608720 TTC6Q86TZ1 520 aa17.39■□□□□ 0.37
CTCFL-219ENST00000608720 RBM33Q96EV2 1170 aaKnown RBP17.39■□□□□ 0.37
CTCFL-219ENST00000608720 SCAND2PQ9GZW5 306 aaPredicted RBP17.39■□□□□ 0.37
CTCFL-219ENST00000608720 CDC37L1Q7L3B6 337 aa17.39■□□□□ 0.37
CTCFL-219ENST00000608720 MPNDQ8N594 471 aa17.39■□□□□ 0.37
CTCFL-219ENST00000608720 SIL1Q9H173 461 aa17.39■□□□□ 0.37
CTCFL-219ENST00000608720 NEURL1BA8MQ27 555 aa17.38■□□□□ 0.37
CTCFL-219ENST00000608720 KRT32Q14532 448 aa17.38■□□□□ 0.37
CTCFL-219ENST00000608720 NPHP4O75161 1426 aaPredicted RBP17.38■□□□□ 0.37
CTCFL-219ENST00000608720 JCADQ9P266 1359 aa17.38■□□□□ 0.37
CTCFL-219ENST00000608720 DTNBO60941 627 aa17.37■□□□□ 0.37
CTCFL-219ENST00000608720 PLCB2Q00722 1185 aa17.37■□□□□ 0.37
CTCFL-219ENST00000608720 GCKRQ14397 625 aa17.37■□□□□ 0.37
CTCFL-219ENST00000608720 MAP3K11Q16584 847 aa17.37■□□□□ 0.37
CTCFL-219ENST00000608720 NUP62CLQ9H1M0 184 aa17.37■□□□□ 0.37
CTCFL-219ENST00000608720 GOLGA6L6A8MZA4 724 aa17.37■□□□□ 0.37
CTCFL-219ENST00000608720 TOB2Q14106 344 aaPredicted RBP17.37■□□□□ 0.37
CTCFL-219ENST00000608720 TAF3Q5VWG9 929 aa17.37■□□□□ 0.37
CTCFL-219ENST00000608720 USPL1Q5W0Q7 1092 aa17.37■□□□□ 0.37
CTCFL-219ENST00000608720 ZNF790Q6PG37 636 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms