RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 ISCA1Q9BUE6 129 aa18.31■□□□□ 0.52
HDDC2-206ENST00000608461 ARFGEF2Q9Y6D5 1785 aa18.31■□□□□ 0.52
HDDC2-206ENST00000608461 FAM177BA6PVY3 158 aa18.3■□□□□ 0.52
HDDC2-206ENST00000608461 YY1P25490 414 aa18.3■□□□□ 0.52
HDDC2-206ENST00000608461 KSR2Q6VAB6 950 aa18.3■□□□□ 0.52
HDDC2-206ENST00000608461 ALDH1B1P30837 517 aa18.29■□□□□ 0.52
HDDC2-206ENST00000608461 CRY2Q49AN0 593 aa18.29■□□□□ 0.52
HDDC2-206ENST00000608461 ERFEQ4G0M1 354 aa18.29■□□□□ 0.52
HDDC2-206ENST00000608461 TRMT2AQ8IZ69 625 aaKnown RBP18.29■□□□□ 0.52
HDDC2-206ENST00000608461 CCDC24Q8N4L8 307 aa18.29■□□□□ 0.52
HDDC2-206ENST00000608461 ZNF622Q969S3 477 aaKnown RBP eCLIP18.29■□□□□ 0.52
HDDC2-206ENST00000608461 CT47B1P0C2W7 299 aaPredicted RBP18.28■□□□□ 0.52
HDDC2-206ENST00000608461 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
HDDC2-206ENST00000608461 NUTM1Q86Y26 1132 aa18.28■□□□□ 0.52
HDDC2-206ENST00000608461 NLRP3Q96P20 1036 aa18.28■□□□□ 0.52
HDDC2-206ENST00000608461 METTL22Q9BUU2 404 aaPredicted RBP18.28■□□□□ 0.52
HDDC2-206ENST00000608461 TRMT112Q9UI30 125 aaKnown RBP18.28■□□□□ 0.52
HDDC2-206ENST00000608461 COL11A2P13942 1736 aaPredicted RBP18.28■□□□□ 0.52
HDDC2-206ENST00000608461 SH3TC1Q8TE82 1336 aa18.27■□□□□ 0.52
HDDC2-206ENST00000608461 NEXNQ0ZGT2 675 aa18.27■□□□□ 0.52
HDDC2-206ENST00000608461 FLIIQ13045 1269 aa18.27■□□□□ 0.52
HDDC2-206ENST00000608461 SOGA3Q5TF21 947 aa18.27■□□□□ 0.52
HDDC2-206ENST00000608461 CCDC191Q8NCU4 936 aa18.27■□□□□ 0.52
HDDC2-206ENST00000608461 WWC3Q9ULE0 1092 aa18.27■□□□□ 0.52
HDDC2-206ENST00000608461 PI4KAP2A4QPH2 592 aa18.26■□□□□ 0.51
HDDC2-206ENST00000608461 HOXA10P31260 410 aaPredicted RBP18.26■□□□□ 0.51
HDDC2-206ENST00000608461 ARHGAP27Q6ZUM4 889 aa18.26■□□□□ 0.51
HDDC2-206ENST00000608461 PI4KAP1Q8N8J0 262 aa18.26■□□□□ 0.51
HDDC2-206ENST00000608461 MAP3K2Q9Y2U5 619 aa18.26■□□□□ 0.51
HDDC2-206ENST00000608461 ABCC12Q96J65 1359 aa18.26■□□□□ 0.51
HDDC2-206ENST00000608461 ATP5J2-PTCD1G3V325 749 aa18.24■□□□□ 0.51
HDDC2-206ENST00000608461 TCERG1O14776 1098 aaKnown RBP18.24■□□□□ 0.51
HDDC2-206ENST00000608461 FKBP5Q13451 457 aaPredicted RBP18.24■□□□□ 0.51
HDDC2-206ENST00000608461 RPGRQ92834 1020 aaKnown RBP18.24■□□□□ 0.51
HDDC2-206ENST00000608461 MYD88Q99836 296 aa18.24■□□□□ 0.51
HDDC2-206ENST00000608461 ADCY9O60503 1353 aa18.24■□□□□ 0.51
HDDC2-206ENST00000608461 TNRC6CQ9HCJ0 1690 aaKnown RBP18.23■□□□□ 0.51
HDDC2-206ENST00000608461 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
HDDC2-206ENST00000608461 G2E3Q7L622 706 aa18.23■□□□□ 0.51
HDDC2-206ENST00000608461 ZBTB38Q8NAP3 1195 aaPredicted RBP18.23■□□□□ 0.51
HDDC2-206ENST00000608461 CDCA7LQ96GN5 454 aa18.23■□□□□ 0.51
HDDC2-206ENST00000608461 RBM17Q96I25 401 aaKnown RBP18.23■□□□□ 0.51
HDDC2-206ENST00000608461 CRAMP1Q96RY5 1269 aa18.23■□□□□ 0.51
HDDC2-206ENST00000608461 CWC25Q9NXE8 425 aaPredicted RBP18.23■□□□□ 0.51
HDDC2-206ENST00000608461 ALDH1L2Q3SY69 923 aa18.22■□□□□ 0.51
HDDC2-206ENST00000608461 GRIPAP1Q4V328 841 aa18.22■□□□□ 0.51
HDDC2-206ENST00000608461 PCCAP05165 728 aaPredicted RBP18.21■□□□□ 0.51
HDDC2-206ENST00000608461 HNRNPUQ00839 825 aaKnown RBP eCLIP18.21■□□□□ 0.51
HDDC2-206ENST00000608461 CC2D2BQ6DHV5 1058 aa18.21■□□□□ 0.51
HDDC2-206ENST00000608461 DNAAF4Q8WXU2 420 aa18.21■□□□□ 0.51
HDDC2-206ENST00000608461 FAM89AQ96GI7 184 aa18.21■□□□□ 0.51
HDDC2-206ENST00000608461 SLX4Q8IY92 1834 aa18.21■□□□□ 0.51
HDDC2-206ENST00000608461 C21orf2O43822 256 aa18.2■□□□□ 0.5
HDDC2-206ENST00000608461 LINS1Q8NG48 757 aa18.2■□□□□ 0.5
HDDC2-206ENST00000608461 C7orf43Q8WVR3 580 aa18.2■□□□□ 0.5
HDDC2-206ENST00000608461 LTBP3Q9NS15 1303 aa18.2■□□□□ 0.5
HDDC2-206ENST00000608461 IGKV5-2P06315 115 aa18.19■□□□□ 0.5
HDDC2-206ENST00000608461 HCLS1P14317 486 aaPredicted RBP18.19■□□□□ 0.5
HDDC2-206ENST00000608461 SF3B3Q15393 1217 aaKnown RBP18.19■□□□□ 0.5
HDDC2-206ENST00000608461 CDHR2Q9BYE9 1310 aa18.19■□□□□ 0.5
HDDC2-206ENST00000608461 CACNA1SQ13698 1873 aa18.18■□□□□ 0.5
HDDC2-206ENST00000608461 FER1L6Q2WGJ9 1857 aa18.18■□□□□ 0.5
HDDC2-206ENST00000608461 DDX60Q8IY21 1712 aaKnown RBP18.18■□□□□ 0.5
HDDC2-206ENST00000608461 LAMB2P55268 1798 aa18.18■□□□□ 0.5
HDDC2-206ENST00000608461 NEURL1BA8MQ27 555 aa18.18■□□□□ 0.5
HDDC2-206ENST00000608461 IRS4O14654 1257 aaPredicted RBP18.18■□□□□ 0.5
HDDC2-206ENST00000608461 BBOX1O75936 387 aa18.18■□□□□ 0.5
HDDC2-206ENST00000608461 CCDC93Q567U6 631 aa18.18■□□□□ 0.5
HDDC2-206ENST00000608461 RTKN2Q8IZC4 609 aa18.18■□□□□ 0.5
HDDC2-206ENST00000608461 PTPRCP08575 1304 aa18.18■□□□□ 0.5
HDDC2-206ENST00000608461 ZC3H4Q9UPT8 1303 aaKnown RBP18.18■□□□□ 0.5
HDDC2-206ENST00000608461 LMNB1P20700 586 aa18.17■□□□□ 0.5
HDDC2-206ENST00000608461 BRPF1P55201 1214 aaPredicted RBP18.17■□□□□ 0.5
HDDC2-206ENST00000608461 DDX46Q7L014 1031 aaKnown RBP18.17■□□□□ 0.5
HDDC2-206ENST00000608461 TMC4Q7Z404 712 aa18.17■□□□□ 0.5
HDDC2-206ENST00000608461 SYNE4Q8N205 404 aa18.17■□□□□ 0.5
HDDC2-206ENST00000608461 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
HDDC2-206ENST00000608461 SBF1O95248 1867 aa18.17■□□□□ 0.5
HDDC2-206ENST00000608461 ZBED9Q6R2W3 1325 aa18.17■□□□□ 0.5
HDDC2-206ENST00000608461 PDE8AO60658 829 aa18.16■□□□□ 0.5
HDDC2-206ENST00000608461 C3orf67Q6ZVT6 689 aa18.16■□□□□ 0.5
HDDC2-206ENST00000608461 SSH1Q8WYL5 1049 aa18.16■□□□□ 0.5
HDDC2-206ENST00000608461 TMX4Q9H1E5 349 aaPredicted RBP18.16■□□□□ 0.5
HDDC2-206ENST00000608461 H7C1W4 665 aa18.15■□□□□ 0.5
HDDC2-206ENST00000608461 NFKBIEO00221 500 aa18.15■□□□□ 0.5
HDDC2-206ENST00000608461 GCKRQ14397 625 aa18.15■□□□□ 0.5
HDDC2-206ENST00000608461 CWF19L2Q2TBE0 894 aaKnown RBP18.15■□□□□ 0.5
HDDC2-206ENST00000608461 C9orf131Q5VYM1 1079 aa18.15■□□□□ 0.5
HDDC2-206ENST00000608461 ZNF784Q8NCA9 323 aaPredicted RBP18.15■□□□□ 0.5
HDDC2-206ENST00000608461 TAOK3Q9H2K8 898 aa18.15■□□□□ 0.5
HDDC2-206ENST00000608461 GRAPQ13588 217 aa18.14■□□□□ 0.49
HDDC2-206ENST00000608461 BEND3Q5T5X7 828 aa18.14■□□□□ 0.49
HDDC2-206ENST00000608461 GRAPLQ8TC17 118 aaPredicted RBP18.14■□□□□ 0.49
HDDC2-206ENST00000608461 ABCC4O15439 1325 aa18.14■□□□□ 0.49
HDDC2-206ENST00000608461 PPEF1O14829 653 aaPredicted RBP18.13■□□□□ 0.49
HDDC2-206ENST00000608461 ALDH1L1O75891 902 aa18.13■□□□□ 0.49
HDDC2-206ENST00000608461 FKBP4Q02790 459 aaKnown RBP eCLIP18.13■□□□□ 0.49
HDDC2-206ENST00000608461 CCDC152Q4G0S7 254 aa18.13■□□□□ 0.49
HDDC2-206ENST00000608461 RTL5Q5HYW3 569 aaPredicted RBP18.13■□□□□ 0.49
HDDC2-206ENST00000608461 PSMD1Q99460 953 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms