RNA–Protein interactions for RNA: ENST00000608272.1

LINC00963-210, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 612 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-210ENST00000608272 GTF2E1P29083 439 aaPredicted RBP17.41■□□□□ 0.38
LINC00963-210ENST00000608272 USP16Q9Y5T5 823 aa17.41■□□□□ 0.38
LINC00963-210ENST00000608272 HSPA5P11021 654 aaKnown RBP17.4■□□□□ 0.38
LINC00963-210ENST00000608272 LARGE2Q8N3Y3 721 aa17.4■□□□□ 0.38
LINC00963-210ENST00000608272 PGAP2Q9UHJ9 254 aa17.4■□□□□ 0.38
LINC00963-210ENST00000608272 GJA3Q9Y6H8 435 aa17.4■□□□□ 0.38
LINC00963-210ENST00000608272 NPC1L1Q9UHC9 1359 aa17.4■□□□□ 0.38
LINC00963-210ENST00000608272 ERVV-1B6SEH8 477 aa17.39■□□□□ 0.37
LINC00963-210ENST00000608272 EPS15P42566 896 aa17.39■□□□□ 0.37
LINC00963-210ENST00000608272 NOGQ13253 232 aa17.39■□□□□ 0.37
LINC00963-210ENST00000608272 NIM1KQ8IY84 436 aa17.39■□□□□ 0.37
LINC00963-210ENST00000608272 CRAMP1Q96RY5 1269 aa17.39■□□□□ 0.37
LINC00963-210ENST00000608272 TMX4Q9H1E5 349 aaPredicted RBP17.38■□□□□ 0.37
LINC00963-210ENST00000608272 GPRC5DQ9NZD1 345 aa17.38■□□□□ 0.37
LINC00963-210ENST00000608272 COL3A1P02461 1466 aaPredicted RBP17.37■□□□□ 0.37
LINC00963-210ENST00000608272 OLFM4Q6UX06 510 aa17.37■□□□□ 0.37
LINC00963-210ENST00000608272 SUPT20HQ8NEM7 779 aa17.37■□□□□ 0.37
LINC00963-210ENST00000608272 RPGRQ92834 1020 aaKnown RBP17.37■□□□□ 0.37
LINC00963-210ENST00000608272 SAGE1Q9NXZ1 904 aa17.37■□□□□ 0.37
LINC00963-210ENST00000608272 HTATSF1O43719 755 aaKnown RBP17.36■□□□□ 0.37
LINC00963-210ENST00000608272 DGKZQ13574 1117 aa17.36■□□□□ 0.37
LINC00963-210ENST00000608272 RBM17Q96I25 401 aaKnown RBP17.36■□□□□ 0.37
LINC00963-210ENST00000608272 CELF2O95319 508 aaKnown RBP17.35■□□□□ 0.37
LINC00963-210ENST00000608272 COL4A5P29400 1685 aa17.35■□□□□ 0.37
LINC00963-210ENST00000608272 TRAF5O00463 557 aa17.34■□□□□ 0.37
LINC00963-210ENST00000608272 AOC2O75106 756 aa17.34■□□□□ 0.37
LINC00963-210ENST00000608272 GRM1Q13255 1194 aa17.34■□□□□ 0.37
LINC00963-210ENST00000608272 CDC37L1Q7L3B6 337 aa17.34■□□□□ 0.37
LINC00963-210ENST00000608272 RTF1Q92541 710 aaKnown RBP17.34■□□□□ 0.37
LINC00963-210ENST00000608272 CFAP44Q96MT7 982 aa17.34■□□□□ 0.37
LINC00963-210ENST00000608272 CASP8AP2Q9UKL3 1982 aa17.33■□□□□ 0.37
LINC00963-210ENST00000608272 NBPF26B4DH59 902 aa17.33■□□□□ 0.36
LINC00963-210ENST00000608272 U2SURPO15042 1029 aaKnown RBP17.33■□□□□ 0.36
LINC00963-210ENST00000608272 PER1O15534 1290 aaPredicted RBP17.33■□□□□ 0.36
LINC00963-210ENST00000608272 KCNQ3O43525 872 aa17.33■□□□□ 0.36
LINC00963-210ENST00000608272 NBPF10Q6P3W6 841 aaKnown RBP17.33■□□□□ 0.36
LINC00963-210ENST00000608272 NBPF15Q8N660 670 aa17.33■□□□□ 0.36
LINC00963-210ENST00000608272 RTFDC1Q9BY42 306 aaPredicted RBP17.33■□□□□ 0.36
LINC00963-210ENST00000608272 ZNRF3Q9ULT6 936 aa17.33■□□□□ 0.36
LINC00963-210ENST00000608272 PPEF1O14829 653 aaPredicted RBP17.32■□□□□ 0.36
LINC00963-210ENST00000608272 PPIP5K2O43314 1243 aa17.32■□□□□ 0.36
LINC00963-210ENST00000608272 TNIP1Q15025 636 aa17.32■□□□□ 0.36
LINC00963-210ENST00000608272 PRPF38BQ5VTL8 546 aaKnown RBP17.32■□□□□ 0.36
LINC00963-210ENST00000608272 ABCC12Q96J65 1359 aa17.31■□□□□ 0.36
LINC00963-210ENST00000608272 LAMB4A4D0S4 1761 aa17.31■□□□□ 0.36
LINC00963-210ENST00000608272 MAP3K15Q6ZN16 1313 aa17.31■□□□□ 0.36
LINC00963-210ENST00000608272 FMR1Q06787 632 aaKnown RBP eCLIP17.31■□□□□ 0.36
LINC00963-210ENST00000608272 REM2Q8IYK8 340 aaPredicted RBP17.31■□□□□ 0.36
LINC00963-210ENST00000608272 TSKSQ9UJT2 592 aa17.31■□□□□ 0.36
LINC00963-210ENST00000608272 HLFQ16534 295 aa17.3■□□□□ 0.36
LINC00963-210ENST00000608272 CIAPIN1Q6FI81 312 aa17.3■□□□□ 0.36
LINC00963-210ENST00000608272 CCDC102AQ96A19 550 aa17.3■□□□□ 0.36
LINC00963-210ENST00000608272 ATP6V0A2Q9Y487 856 aa17.3■□□□□ 0.36
LINC00963-210ENST00000608272 PIP4K2AP48426 406 aaPredicted RBP17.29■□□□□ 0.36
LINC00963-210ENST00000608272 CXCL9Q07325 125 aa17.29■□□□□ 0.36
LINC00963-210ENST00000608272 PARP10Q53GL7 1025 aa17.29■□□□□ 0.36
LINC00963-210ENST00000608272 PPP1R42Q7Z4L9 355 aa17.29■□□□□ 0.36
LINC00963-210ENST00000608272 PNISRQ8TF01 805 aaKnown RBP17.29■□□□□ 0.36
LINC00963-210ENST00000608272 RSPH6AQ9H0K4 717 aa17.29■□□□□ 0.36
LINC00963-210ENST00000608272 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
LINC00963-210ENST00000608272 NUP98P52948 1817 aa17.28■□□□□ 0.36
LINC00963-210ENST00000608272 PRAMEF22A3QJZ6 481 aa17.28■□□□□ 0.36
LINC00963-210ENST00000608272 FAM177BA6PVY3 158 aa17.28■□□□□ 0.36
LINC00963-210ENST00000608272 PRKAR2BP31323 418 aa17.28■□□□□ 0.36
LINC00963-210ENST00000608272 KIF6Q6ZMV9 814 aa17.28■□□□□ 0.36
LINC00963-210ENST00000608272 CFAP53Q96M91 514 aa17.28■□□□□ 0.36
LINC00963-210ENST00000608272 NLRP3Q96P20 1036 aa17.28■□□□□ 0.36
LINC00963-210ENST00000608272 ERBB4Q15303 1308 aa17.27■□□□□ 0.36
LINC00963-210ENST00000608272 BBOX1O75936 387 aa17.27■□□□□ 0.36
LINC00963-210ENST00000608272 KIAA2012Q0VF49 1180 aa17.27■□□□□ 0.36
LINC00963-210ENST00000608272 TAF7Q15545 349 aaPredicted RBP17.27■□□□□ 0.36
LINC00963-210ENST00000608272 NUTM1Q86Y26 1132 aa17.27■□□□□ 0.36
LINC00963-210ENST00000608272 PHACTR3Q96KR7 559 aa17.27■□□□□ 0.36
LINC00963-210ENST00000608272 GLIS2Q9BZE0 524 aaPredicted RBP17.27■□□□□ 0.36
LINC00963-210ENST00000608272 H7C1D1 291 aa17.26■□□□□ 0.35
LINC00963-210ENST00000608272 GMPSP49915 693 aaPredicted RBP17.26■□□□□ 0.35
LINC00963-210ENST00000608272 HUNKP57058 714 aa17.26■□□□□ 0.35
LINC00963-210ENST00000608272 AOC3Q16853 763 aa17.26■□□□□ 0.35
LINC00963-210ENST00000608272 SLC10A5Q5PT55 438 aa17.26■□□□□ 0.35
LINC00963-210ENST00000608272 TMC4Q7Z404 712 aa17.26■□□□□ 0.35
LINC00963-210ENST00000608272 ZNF34Q8IZ26 560 aa17.26■□□□□ 0.35
LINC00963-210ENST00000608272 DPF2Q92785 391 aa17.26■□□□□ 0.35
LINC00963-210ENST00000608272 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
LINC00963-210ENST00000608272 PKN2Q16513 984 aaKnown RBP17.25■□□□□ 0.35
LINC00963-210ENST00000608272 RGMBQ6NW40 437 aa17.25■□□□□ 0.35
LINC00963-210ENST00000608272 SP8Q8IXZ3 490 aa17.25■□□□□ 0.35
LINC00963-210ENST00000608272 NTSR2O95665 410 aa17.24■□□□□ 0.35
LINC00963-210ENST00000608272 TRIM26Q12899 539 aaPredicted RBP17.24■□□□□ 0.35
LINC00963-210ENST00000608272 CC2D1BQ5T0F9 858 aaKnown RBP17.24■□□□□ 0.35
LINC00963-210ENST00000608272 GIGYF2Q6Y7W6 1299 aaKnown RBP17.24■□□□□ 0.35
LINC00963-210ENST00000608272 GCC1Q96CN9 775 aa17.24■□□□□ 0.35
LINC00963-210ENST00000608272 UBN2Q6ZU65 1347 aa17.23■□□□□ 0.35
LINC00963-210ENST00000608272 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
LINC00963-210ENST00000608272 DPP8Q6V1X1 898 aaPredicted RBP17.23■□□□□ 0.35
LINC00963-210ENST00000608272 C2orf69Q8N8R5 385 aa17.23■□□□□ 0.35
LINC00963-210ENST00000608272 FAM155AB1AL88 458 aaPredicted RBP17.22■□□□□ 0.35
LINC00963-210ENST00000608272 RPS12P25398 132 aaKnown RBP17.22■□□□□ 0.35
LINC00963-210ENST00000608272 HIRAP54198 1017 aaPredicted RBP17.22■□□□□ 0.35
LINC00963-210ENST00000608272 CTU1Q7Z7A3 348 aaKnown RBP17.22■□□□□ 0.35
LINC00963-210ENST00000608272 MPNDQ8N594 471 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms