RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 ABCC12Q96J65 1359 aa24.81■■□□□ 1.56
CTSA-217ENST00000607482 TOMM70O94826 608 aa24.81■■□□□ 1.56
CTSA-217ENST00000607482 NTSR2O95665 410 aa24.81■■□□□ 1.56
CTSA-217ENST00000607482 PLBD2Q8NHP8 589 aa24.81■■□□□ 1.56
CTSA-217ENST00000607482 SALL2Q9Y467 1007 aaPredicted RBP24.81■■□□□ 1.56
CTSA-217ENST00000607482 GOLGA2Q08379 1002 aa24.8■■□□□ 1.56
CTSA-217ENST00000607482 SLX4Q8IY92 1834 aa24.79■■□□□ 1.56
CTSA-217ENST00000607482 CRY2Q49AN0 593 aa24.79■■□□□ 1.56
CTSA-217ENST00000607482 RIC3Q7Z5B4 369 aa24.79■■□□□ 1.56
CTSA-217ENST00000607482 FAM9BQ8IZU0 186 aa24.79■■□□□ 1.56
CTSA-217ENST00000607482 SBF1O95248 1867 aa24.79■■□□□ 1.56
CTSA-217ENST00000607482 CACNA1SQ13698 1873 aa24.79■■□□□ 1.56
CTSA-217ENST00000607482 GLTPD2A6NH11 291 aa24.78■■□□□ 1.56
CTSA-217ENST00000607482 CCDC27Q2M243 656 aa24.78■■□□□ 1.56
CTSA-217ENST00000607482 CCDC30Q5VVM6 783 aa24.78■■□□□ 1.56
CTSA-217ENST00000607482 NLRP10Q86W26 655 aa24.78■■□□□ 1.56
CTSA-217ENST00000607482 WWC1Q8IX03 1113 aa24.78■■□□□ 1.56
CTSA-217ENST00000607482 RNF123Q5XPI4 1314 aa24.78■■□□□ 1.56
CTSA-217ENST00000607482 LTBP3Q9NS15 1303 aa24.78■■□□□ 1.56
CTSA-217ENST00000607482 TCERG1O14776 1098 aaKnown RBP24.77■■□□□ 1.56
CTSA-217ENST00000607482 PRELPP51888 382 aa24.77■■□□□ 1.56
CTSA-217ENST00000607482 C8orf58Q8NAV2 365 aa24.77■■□□□ 1.56
CTSA-217ENST00000607482 SH3TC1Q8TE82 1336 aa24.77■■□□□ 1.56
CTSA-217ENST00000607482 FKBP4Q02790 459 aaKnown RBP eCLIP24.76■■□□□ 1.55
CTSA-217ENST00000607482 C7orf43Q8WVR3 580 aa24.76■■□□□ 1.55
CTSA-217ENST00000607482 TSR2Q969E8 191 aaKnown RBP24.76■■□□□ 1.55
CTSA-217ENST00000607482 ZNF428Q96B54 188 aa24.76■■□□□ 1.55
CTSA-217ENST00000607482 STK31Q9BXU1 1019 aa24.76■■□□□ 1.55
CTSA-217ENST00000607482 DDX58O95786 925 aaKnown RBP24.75■■□□□ 1.55
CTSA-217ENST00000607482 VEGFAP15692 232 aaPredicted RBP24.75■■□□□ 1.55
CTSA-217ENST00000607482 HOXA10P31260 410 aaPredicted RBP24.75■■□□□ 1.55
CTSA-217ENST00000607482 CC2D2BQ6DHV5 1058 aa24.75■■□□□ 1.55
CTSA-217ENST00000607482 OLFM4Q6UX06 510 aa24.75■■□□□ 1.55
CTSA-217ENST00000607482 ATP5J2-PTCD1G3V325 749 aa24.74■■□□□ 1.55
CTSA-217ENST00000607482 PPEF1O14829 653 aaPredicted RBP24.74■■□□□ 1.55
CTSA-217ENST00000607482 HCLS1P14317 486 aaPredicted RBP24.74■■□□□ 1.55
CTSA-217ENST00000607482 SLC10A5Q5PT55 438 aa24.74■■□□□ 1.55
CTSA-217ENST00000607482 CRAMP1Q96RY5 1269 aa24.74■■□□□ 1.55
CTSA-217ENST00000607482 ZNF277Q9NRM2 450 aaPredicted RBP24.74■■□□□ 1.55
CTSA-217ENST00000607482 RIC1Q4ADV7 1423 aa24.74■■□□□ 1.55
CTSA-217ENST00000607482 HSPA6P17066 643 aa24.73■■□□□ 1.55
CTSA-217ENST00000607482 GRIPAP1Q4V328 841 aa24.73■■□□□ 1.55
CTSA-217ENST00000607482 DDX46Q7L014 1031 aaKnown RBP24.72■■□□□ 1.55
CTSA-217ENST00000607482 SYNE4Q8N205 404 aa24.72■■□□□ 1.55
CTSA-217ENST00000607482 RBM46Q8TBY0 533 aaKnown RBP24.72■■□□□ 1.55
CTSA-217ENST00000607482 CCDC88AQ3V6T2 1871 aa24.72■■□□□ 1.55
CTSA-217ENST00000607482 ARFGEF2Q9Y6D5 1785 aa24.72■■□□□ 1.55
CTSA-217ENST00000607482 FER1L6Q2WGJ9 1857 aa24.71■■□□□ 1.55
CTSA-217ENST00000607482 IL16Q14005 1332 aa24.71■■□□□ 1.55
CTSA-217ENST00000607482 C3orf67Q6ZVT6 689 aa24.71■■□□□ 1.55
CTSA-217ENST00000607482 JDP2Q8WYK2 163 aa24.71■■□□□ 1.55
CTSA-217ENST00000607482 PHAXQ9H814 394 aaKnown RBP24.71■■□□□ 1.55
CTSA-217ENST00000607482 TNRC6CQ9HCJ0 1690 aaKnown RBP24.71■■□□□ 1.55
CTSA-217ENST00000607482 TWISTNBQ3B726 338 aaPredicted RBP24.7■■□□□ 1.54
CTSA-217ENST00000607482 NCBP3Q53F19 620 aaKnown RBP24.7■■□□□ 1.54
CTSA-217ENST00000607482 RTL5Q5HYW3 569 aaPredicted RBP24.7■■□□□ 1.54
CTSA-217ENST00000607482 HSP90B1P14625 803 aaKnown RBP24.69■■□□□ 1.54
CTSA-217ENST00000607482 IARSP41252 1262 aaKnown RBP24.69■■□□□ 1.54
CTSA-217ENST00000607482 TSPYL6Q8N831 410 aa24.69■■□□□ 1.54
CTSA-217ENST00000607482 FAM89AQ96GI7 184 aa24.69■■□□□ 1.54
CTSA-217ENST00000607482 TIAM2Q8IVF5 1701 aa24.69■■□□□ 1.54
CTSA-217ENST00000607482 WDR63Q8IWG1 891 aa24.68■■□□□ 1.54
CTSA-217ENST00000607482 MYD88Q99836 296 aa24.68■■□□□ 1.54
CTSA-217ENST00000607482 ISCA1Q9BUE6 129 aa24.68■■□□□ 1.54
CTSA-217ENST00000607482 ANKRD36CQ5JPF3 1778 aa24.67■■□□□ 1.54
CTSA-217ENST00000607482 BBOX1O75936 387 aa24.67■■□□□ 1.54
CTSA-217ENST00000607482 FSTL1Q12841 308 aa24.67■■□□□ 1.54
CTSA-217ENST00000607482 SMC1BQ8NDV3 1235 aa24.67■■□□□ 1.54
CTSA-217ENST00000607482 PSMD1Q99460 953 aa24.67■■□□□ 1.54
CTSA-217ENST00000607482 ABCC4O15439 1325 aa24.65■■□□□ 1.54
CTSA-217ENST00000607482 DDNO94850 711 aaPredicted RBP24.65■■□□□ 1.54
CTSA-217ENST00000607482 APLP1P51693 650 aa24.65■■□□□ 1.54
CTSA-217ENST00000607482 ATP6V0A2Q9Y487 856 aa24.65■■□□□ 1.54
CTSA-217ENST00000607482 IRS4O14654 1257 aaPredicted RBP24.64■■□□□ 1.54
CTSA-217ENST00000607482 NEXNQ0ZGT2 675 aa24.64■■□□□ 1.54
CTSA-217ENST00000607482 TRIM28Q13263 835 aaKnown RBP24.64■■□□□ 1.54
CTSA-217ENST00000607482 LARGE2Q8N3Y3 721 aa24.64■■□□□ 1.54
CTSA-217ENST00000607482 MAP3K2Q9Y2U5 619 aa24.64■■□□□ 1.54
CTSA-217ENST00000607482 IQCA1LA6NCM1 817 aa24.63■■□□□ 1.53
CTSA-217ENST00000607482 SLC4A2P04920 1241 aa24.63■■□□□ 1.53
CTSA-217ENST00000607482 SUPT20HQ8NEM7 779 aa24.63■■□□□ 1.53
CTSA-217ENST00000607482 MYH16Q9H6N6 1097 aa24.63■■□□□ 1.53
CTSA-217ENST00000607482 CWC25Q9NXE8 425 aaPredicted RBP24.63■■□□□ 1.53
CTSA-217ENST00000607482 FANCIQ9NVI1 1328 aa24.62■■□□□ 1.53
CTSA-217ENST00000607482 EIF6P56537 245 aaKnown RBP24.62■■□□□ 1.53
CTSA-217ENST00000607482 GRAPQ13588 217 aa24.62■■□□□ 1.53
CTSA-217ENST00000607482 DPP8Q6V1X1 898 aaPredicted RBP24.62■■□□□ 1.53
CTSA-217ENST00000607482 ZBTB38Q8NAP3 1195 aaPredicted RBP24.62■■□□□ 1.53
CTSA-217ENST00000607482 CCDC191Q8NCU4 936 aa24.62■■□□□ 1.53
CTSA-217ENST00000607482 GRAPLQ8TC17 118 aaPredicted RBP24.62■■□□□ 1.53
CTSA-217ENST00000607482 DICER1Q9UPY3 1922 aaKnown RBP24.62■■□□□ 1.53
CTSA-217ENST00000607482 KSR2Q6VAB6 950 aa24.61■■□□□ 1.53
CTSA-217ENST00000607482 TMC4Q7Z404 712 aa24.61■■□□□ 1.53
CTSA-217ENST00000607482 METTL22Q9BUU2 404 aaPredicted RBP24.61■■□□□ 1.53
CTSA-217ENST00000607482 PI4KAP2A4QPH2 592 aa24.6■■□□□ 1.53
CTSA-217ENST00000607482 PPIP5K2O43314 1243 aa24.6■■□□□ 1.53
CTSA-217ENST00000607482 SP8Q8IXZ3 490 aa24.6■■□□□ 1.53
CTSA-217ENST00000607482 NIM1KQ8IY84 436 aa24.6■■□□□ 1.53
CTSA-217ENST00000607482 MPNDQ8N594 471 aa24.6■■□□□ 1.53
CTSA-217ENST00000607482 PI4KAP1Q8N8J0 262 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms