RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 LSG1Q9H089 658 aaKnown RBP24.06■■□□□ 1.44
MMP28-201ENST00000605424 LRP6O75581 1613 aa24.06■■□□□ 1.44
MMP28-201ENST00000605424 ATP5J2-PTCD1G3V325 749 aa24.05■■□□□ 1.44
MMP28-201ENST00000605424 PTCD1O75127 700 aaKnown RBP24.05■■□□□ 1.44
MMP28-201ENST00000605424 PTPN12Q05209 780 aaKnown RBP24.05■■□□□ 1.44
MMP28-201ENST00000605424 IL25Q9H293 177 aa24.05■■□□□ 1.44
MMP28-201ENST00000605424 CWC25Q9NXE8 425 aaPredicted RBP24.05■■□□□ 1.44
MMP28-201ENST00000605424 TOGARAM1Q9Y4F4 1720 aa24.05■■□□□ 1.44
MMP28-201ENST00000605424 CCDC191Q8NCU4 936 aa24.04■■□□□ 1.44
MMP28-201ENST00000605424 A1BGP04217 495 aa24.04■■□□□ 1.44
MMP28-201ENST00000605424 SKOR2Q2VWA4 1001 aaPredicted RBP24.04■■□□□ 1.44
MMP28-201ENST00000605424 SIL1Q9H173 461 aa24.04■■□□□ 1.44
MMP28-201ENST00000605424 DISP2A7MBM2 1401 aa24.03■■□□□ 1.44
MMP28-201ENST00000605424 CWC27Q6UX04 472 aaKnown RBP24.03■■□□□ 1.44
MMP28-201ENST00000605424 CYP2E1P05181 493 aaPredicted RBP24.02■■□□□ 1.44
MMP28-201ENST00000605424 CUL4AQ13619 759 aa24.02■■□□□ 1.44
MMP28-201ENST00000605424 TTLL7Q6ZT98 887 aa24.02■■□□□ 1.44
MMP28-201ENST00000605424 INTS4Q96HW7 963 aaKnown RBP24.02■■□□□ 1.44
MMP28-201ENST00000605424 TMX3Q96JJ7 454 aa24.02■■□□□ 1.44
MMP28-201ENST00000605424 GOLGA6L22H0YM25 854 aa24.02■■□□□ 1.44
MMP28-201ENST00000605424 CCDC8Q9H0W5 538 aaPredicted RBP24.02■■□□□ 1.44
MMP28-201ENST00000605424 SSFA2P28290 1259 aa24■■□□□ 1.43
MMP28-201ENST00000605424 SNRKQ9NRH2 765 aa24■■□□□ 1.43
MMP28-201ENST00000605424 PLCH1Q4KWH8 1693 aa24■■□□□ 1.43
MMP28-201ENST00000605424 FOXO4P98177 505 aa24■■□□□ 1.43
MMP28-201ENST00000605424 KLHDC4Q8TBB5 520 aa24■■□□□ 1.43
MMP28-201ENST00000605424 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24■■□□□ 1.43
MMP28-201ENST00000605424 TNNI3KQ59H18 835 aa23.98■■□□□ 1.43
MMP28-201ENST00000605424 SPATA31A6Q5VVP1 1343 aa23.98■■□□□ 1.43
MMP28-201ENST00000605424 LMBR1LQ6UX01 489 aa23.98■■□□□ 1.43
MMP28-201ENST00000605424 ATG3Q9NT62 314 aa23.98■■□□□ 1.43
MMP28-201ENST00000605424 SNX14Q9Y5W7 946 aa23.98■■□□□ 1.43
MMP28-201ENST00000605424 FPGT-TNNI3KV9GXZ4 949 aa23.98■■□□□ 1.43
MMP28-201ENST00000605424 ATP5JP18859 108 aa23.98■■□□□ 1.43
MMP28-201ENST00000605424 PIGBQ92521 554 aa23.98■■□□□ 1.43
MMP28-201ENST00000605424 STARD3NLO95772 234 aa23.97■■□□□ 1.43
MMP28-201ENST00000605424 TRIM28Q13263 835 aaKnown RBP23.97■■□□□ 1.43
MMP28-201ENST00000605424 JARID2Q92833 1246 aaPredicted RBP23.97■■□□□ 1.43
MMP28-201ENST00000605424 KCNB2Q92953 911 aa23.97■■□□□ 1.43
MMP28-201ENST00000605424 TLR7Q9NYK1 1049 aaKnown RBP23.97■■□□□ 1.43
MMP28-201ENST00000605424 TJP1Q07157 1748 aa23.97■■□□□ 1.43
MMP28-201ENST00000605424 L1TD1Q5T7N2 865 aaKnown RBP23.96■■□□□ 1.43
MMP28-201ENST00000605424 ISCA1Q9BUE6 129 aa23.96■■□□□ 1.43
MMP28-201ENST00000605424 GPR108Q9NPR9 543 aa23.96■■□□□ 1.43
MMP28-201ENST00000605424 BAG4O95429 457 aaKnown RBP23.96■■□□□ 1.43
MMP28-201ENST00000605424 TFCP2Q12800 502 aa23.96■■□□□ 1.43
MMP28-201ENST00000605424 ZGPATQ8N5A5 531 aaKnown RBP23.96■■□□□ 1.43
MMP28-201ENST00000605424 RFX7Q2KHR2 1363 aa23.95■■□□□ 1.42
MMP28-201ENST00000605424 BOLA2Q9H3K6 86 aa23.95■■□□□ 1.42
MMP28-201ENST00000605424 ZBTB3Q9H5J0 574 aa23.95■■□□□ 1.42
MMP28-201ENST00000605424 ITGB4P16144 1822 aa23.95■■□□□ 1.42
MMP28-201ENST00000605424 TCIRG1Q13488 830 aa23.94■■□□□ 1.42
MMP28-201ENST00000605424 TICAM2Q86XR7 235 aa23.94■■□□□ 1.42
MMP28-201ENST00000605424 TM6SF1Q9BZW5 370 aa23.94■■□□□ 1.42
MMP28-201ENST00000605424 ASAP1Q9ULH1 1129 aa23.94■■□□□ 1.42
MMP28-201ENST00000605424 CDCA7Q9BWT1 371 aaPredicted RBP23.94■■□□□ 1.42
MMP28-201ENST00000605424 UPF3BQ9BZI7 483 aaKnown RBP23.94■■□□□ 1.42
MMP28-201ENST00000605424 DBNLQ9UJU6 430 aaKnown RBP23.94■■□□□ 1.42
MMP28-201ENST00000605424 BCL9O00512 1426 aa23.94■■□□□ 1.42
MMP28-201ENST00000605424 CCDC171Q6TFL3 1326 aa23.93■■□□□ 1.42
MMP28-201ENST00000605424 EXOC5O00471 708 aa23.93■■□□□ 1.42
MMP28-201ENST00000605424 KIF6Q6ZMV9 814 aa23.93■■□□□ 1.42
MMP28-201ENST00000605424 FSD1Q9BTV5 496 aa23.93■■□□□ 1.42
MMP28-201ENST00000605424 ISY1Q9ULR0 285 aaKnown RBP23.93■■□□□ 1.42
MMP28-201ENST00000605424 IL15P40933 162 aaPredicted RBP23.92■■□□□ 1.42
MMP28-201ENST00000605424 C8orf37Q96NL8 207 aa23.92■■□□□ 1.42
MMP28-201ENST00000605424 TTC14Q96N46 770 aa23.92■■□□□ 1.42
MMP28-201ENST00000605424 CIAO1O76071 339 aa23.91■■□□□ 1.42
MMP28-201ENST00000605424 NMIQ13287 307 aaPredicted RBP23.91■■□□□ 1.42
MMP28-201ENST00000605424 NECTIN1Q15223 517 aa23.91■■□□□ 1.42
MMP28-201ENST00000605424 DNAJC10Q8IXB1 793 aa23.91■■□□□ 1.42
MMP28-201ENST00000605424 RASEFQ8IZ41 740 aa23.91■■□□□ 1.42
MMP28-201ENST00000605424 MAP4K1Q92918 833 aa23.91■■□□□ 1.42
MMP28-201ENST00000605424 FBXO3Q9UK99 471 aa23.91■■□□□ 1.42
MMP28-201ENST00000605424 PTH1RQ03431 593 aa23.9■■□□□ 1.42
MMP28-201ENST00000605424 ZKSCAN1P17029 563 aaPredicted RBP23.9■■□□□ 1.42
MMP28-201ENST00000605424 ILDR1Q86SU0 546 aaPredicted RBP23.9■■□□□ 1.42
MMP28-201ENST00000605424 CHMP3Q9Y3E7 222 aa23.9■■□□□ 1.42
MMP28-201ENST00000605424 WNK3Q9BYP7 1800 aa23.9■■□□□ 1.42
MMP28-201ENST00000605424 FSD2A1L4K1 749 aa23.89■■□□□ 1.42
MMP28-201ENST00000605424 ATG9AQ7Z3C6 839 aa23.89■■□□□ 1.42
MMP28-201ENST00000605424 PLA2G12BQ9BX93 195 aa23.89■■□□□ 1.42
MMP28-201ENST00000605424 MED23Q9ULK4 1368 aa23.89■■□□□ 1.41
MMP28-201ENST00000605424 PCCAP05165 728 aaPredicted RBP23.88■■□□□ 1.41
MMP28-201ENST00000605424 FAM227BQ96M60 508 aa23.88■■□□□ 1.41
MMP28-201ENST00000605424 HAUS7Q99871 368 aa23.88■■□□□ 1.41
MMP28-201ENST00000605424 THRAP3Q9Y2W1 955 aaKnown RBP23.88■■□□□ 1.41
MMP28-201ENST00000605424 SLIT2O94813 1529 aa23.88■■□□□ 1.41
MMP28-201ENST00000605424 GOLGA6L3A6NEY3 463 aa23.88■■□□□ 1.41
MMP28-201ENST00000605424 EYA2O00167 538 aa23.88■■□□□ 1.41
MMP28-201ENST00000605424 HSP90AB3PQ58FF7 597 aa23.88■■□□□ 1.41
MMP28-201ENST00000605424 NGLY1Q96IV0 654 aa23.88■■□□□ 1.41
MMP28-201ENST00000605424 VPS53Q5VIR6 699 aa23.87■■□□□ 1.41
MMP28-201ENST00000605424 ZSWIM6Q9HCJ5 1215 aa23.87■■□□□ 1.41
MMP28-201ENST00000605424 LIMCH1Q9UPQ0 1083 aa23.87■■□□□ 1.41
MMP28-201ENST00000605424 ZDHHC9Q9Y397 364 aa23.87■■□□□ 1.41
MMP28-201ENST00000605424 MAP3K15Q6ZN16 1313 aa23.87■■□□□ 1.41
MMP28-201ENST00000605424 PKP1Q13835 747 aa23.86■■□□□ 1.41
MMP28-201ENST00000605424 RNF20Q5VTR2 975 aa23.86■■□□□ 1.41
MMP28-201ENST00000605424 PRPF40BQ6NWY9 871 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms