RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 ISCA1Q9BUE6 129 aa13.87□□□□□ -0.19
TUBE1-210ENST00000604967 DBF4Q9UBU7 674 aaPredicted RBP13.87□□□□□ -0.19
TUBE1-210ENST00000604967 PDZRN3Q9UPQ7 1066 aa13.87□□□□□ -0.19
TUBE1-210ENST00000604967 COL4A5P29400 1685 aa13.86□□□□□ -0.19
TUBE1-210ENST00000604967 ATP5J2-PTCD1G3V325 749 aa13.86□□□□□ -0.19
TUBE1-210ENST00000604967 NPHP1O15259 732 aa13.86□□□□□ -0.19
TUBE1-210ENST00000604967 HCLS1P14317 486 aaPredicted RBP13.86□□□□□ -0.19
TUBE1-210ENST00000604967 HOXA10P31260 410 aaPredicted RBP13.86□□□□□ -0.19
TUBE1-210ENST00000604967 SLC10A5Q5PT55 438 aa13.86□□□□□ -0.19
TUBE1-210ENST00000604967 G2E3Q7L622 706 aa13.86□□□□□ -0.19
TUBE1-210ENST00000604967 PLBD2Q8NHP8 589 aa13.86□□□□□ -0.19
TUBE1-210ENST00000604967 CNKSR1Q969H4 720 aa13.86□□□□□ -0.19
TUBE1-210ENST00000604967 GPBP1L1Q9HC44 474 aaPredicted RBP13.86□□□□□ -0.19
TUBE1-210ENST00000604967 CCDC88AQ3V6T2 1871 aa13.86□□□□□ -0.19
TUBE1-210ENST00000604967 FANCIQ9NVI1 1328 aa13.86□□□□□ -0.19
TUBE1-210ENST00000604967 LAMB2P55268 1798 aa13.86□□□□□ -0.19
TUBE1-210ENST00000604967 TIAM2Q8IVF5 1701 aa13.85□□□□□ -0.19
TUBE1-210ENST00000604967 LMNB1P20700 586 aa13.85□□□□□ -0.19
TUBE1-210ENST00000604967 NCBP3Q53F19 620 aaKnown RBP13.85□□□□□ -0.19
TUBE1-210ENST00000604967 ANKRD13DQ6ZTN6 518 aa13.85□□□□□ -0.19
TUBE1-210ENST00000604967 NYXQ9GZU5 481 aa13.85□□□□□ -0.19
TUBE1-210ENST00000604967 CEP350Q5VT06 3117 aa13.85□□□□□ -0.19
TUBE1-210ENST00000604967 IL16Q14005 1332 aa13.85□□□□□ -0.19
TUBE1-210ENST00000604967 ZNF521Q96K83 1311 aa13.85□□□□□ -0.19
TUBE1-210ENST00000604967 POTECB2RU33 542 aa13.84□□□□□ -0.19
TUBE1-210ENST00000604967 CALD1Q05682 793 aaKnown RBP13.84□□□□□ -0.19
TUBE1-210ENST00000604967 PARP10Q53GL7 1025 aa13.84□□□□□ -0.19
TUBE1-210ENST00000604967 UTP14AQ9BVJ6 771 aaKnown RBP13.84□□□□□ -0.19
TUBE1-210ENST00000604967 HYPKQ9NX55 129 aa13.84□□□□□ -0.19
TUBE1-210ENST00000604967 LTBP3Q9NS15 1303 aa13.84□□□□□ -0.19
TUBE1-210ENST00000604967 DDX60Q8IY21 1712 aaKnown RBP13.84□□□□□ -0.19
TUBE1-210ENST00000604967 GTF2E1P29083 439 aaPredicted RBP13.83□□□□□ -0.2
TUBE1-210ENST00000604967 TAF1P21675 1872 aa13.82□□□□□ -0.2
TUBE1-210ENST00000604967 PPP1R42Q7Z4L9 355 aa13.82□□□□□ -0.2
TUBE1-210ENST00000604967 JARID2Q92833 1246 aaPredicted RBP13.82□□□□□ -0.2
TUBE1-210ENST00000604967 FAM89AQ96GI7 184 aa13.82□□□□□ -0.2
TUBE1-210ENST00000604967 VAMP4O75379 141 aa13.81□□□□□ -0.2
TUBE1-210ENST00000604967 TRIM28Q13263 835 aaKnown RBP13.81□□□□□ -0.2
TUBE1-210ENST00000604967 TWISTNBQ3B726 338 aaPredicted RBP13.81□□□□□ -0.2
TUBE1-210ENST00000604967 RTL5Q5HYW3 569 aaPredicted RBP13.81□□□□□ -0.2
TUBE1-210ENST00000604967 WDR63Q8IWG1 891 aa13.81□□□□□ -0.2
TUBE1-210ENST00000604967 TAOK3Q9H2K8 898 aa13.81□□□□□ -0.2
TUBE1-210ENST00000604967 ZNF277Q9NRM2 450 aaPredicted RBP13.81□□□□□ -0.2
TUBE1-210ENST00000604967 TRMT112Q9UI30 125 aaKnown RBP13.81□□□□□ -0.2
TUBE1-210ENST00000604967 ABCC4O15439 1325 aa13.81□□□□□ -0.2
TUBE1-210ENST00000604967 DICER1Q9UPY3 1922 aaKnown RBP13.8□□□□□ -0.2
TUBE1-210ENST00000604967 IGKV5-2P06315 115 aa13.8□□□□□ -0.2
TUBE1-210ENST00000604967 EXOSC9Q06265 439 aaKnown RBP13.8□□□□□ -0.2
TUBE1-210ENST00000604967 HSP90AB3PQ58FF7 597 aa13.8□□□□□ -0.2
TUBE1-210ENST00000604967 CRAMP1Q96RY5 1269 aa13.8□□□□□ -0.2
TUBE1-210ENST00000604967 RRAGCQ9HB90 399 aa13.8□□□□□ -0.2
TUBE1-210ENST00000604967 ALDH1B1P30837 517 aa13.79□□□□□ -0.2
TUBE1-210ENST00000604967 CCDC93Q567U6 631 aa13.79□□□□□ -0.2
TUBE1-210ENST00000604967 CCDC30Q5VVM6 783 aa13.79□□□□□ -0.2
TUBE1-210ENST00000604967 RPGRQ92834 1020 aaKnown RBP13.79□□□□□ -0.2
TUBE1-210ENST00000604967 MYD88Q99836 296 aa13.79□□□□□ -0.2
TUBE1-210ENST00000604967 SH3TC1Q8TE82 1336 aa13.79□□□□□ -0.2
TUBE1-210ENST00000604967 GLTPD2A6NH11 291 aa13.78□□□□□ -0.2
TUBE1-210ENST00000604967 FKBP4Q02790 459 aaKnown RBP eCLIP13.78□□□□□ -0.2
TUBE1-210ENST00000604967 RIC3Q7Z5B4 369 aa13.78□□□□□ -0.2
TUBE1-210ENST00000604967 NLRP3Q96P20 1036 aa13.78□□□□□ -0.2
TUBE1-210ENST00000604967 METTL22Q9BUU2 404 aaPredicted RBP13.78□□□□□ -0.2
TUBE1-210ENST00000604967 MAP3K2Q9Y2U5 619 aa13.78□□□□□ -0.2
TUBE1-210ENST00000604967 RNF123Q5XPI4 1314 aa13.78□□□□□ -0.2
TUBE1-210ENST00000604967 ZNF541Q9H0D2 1346 aa13.78□□□□□ -0.2
TUBE1-210ENST00000604967 PI4KAP2A4QPH2 592 aa13.77□□□□□ -0.21
TUBE1-210ENST00000604967 PPEF1O14829 653 aaPredicted RBP13.77□□□□□ -0.21
TUBE1-210ENST00000604967 SLC4A2P04920 1241 aa13.77□□□□□ -0.21
TUBE1-210ENST00000604967 PI4KAP1Q8N8J0 262 aa13.77□□□□□ -0.21
TUBE1-210ENST00000604967 CELF1Q92879 486 aaKnown RBP13.77□□□□□ -0.21
TUBE1-210ENST00000604967 RBM17Q96I25 401 aaKnown RBP13.77□□□□□ -0.21
TUBE1-210ENST00000604967 DUOX1Q9NRD9 1551 aa13.77□□□□□ -0.21
TUBE1-210ENST00000604967 ZC3H4Q9UPT8 1303 aaKnown RBP13.77□□□□□ -0.21
TUBE1-210ENST00000604967 WDR90Q96KV7 1748 aa13.76□□□□□ -0.21
TUBE1-210ENST00000604967 DDNO94850 711 aaPredicted RBP13.76□□□□□ -0.21
TUBE1-210ENST00000604967 GOLGA2Q08379 1002 aa13.76□□□□□ -0.21
TUBE1-210ENST00000604967 CWF19L2Q2TBE0 894 aaKnown RBP13.76□□□□□ -0.21
TUBE1-210ENST00000604967 KSR2Q6VAB6 950 aa13.76□□□□□ -0.21
TUBE1-210ENST00000604967 PSMD1Q99460 953 aa13.76□□□□□ -0.21
TUBE1-210ENST00000604967 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
TUBE1-210ENST00000604967 POTEIP0CG38 1075 aa13.75□□□□□ -0.21
TUBE1-210ENST00000604967 POTEJP0CG39 1038 aa13.75□□□□□ -0.21
TUBE1-210ENST00000604967 SF3B3Q15393 1217 aaKnown RBP13.75□□□□□ -0.21
TUBE1-210ENST00000604967 SOGA3Q5TF21 947 aa13.75□□□□□ -0.21
TUBE1-210ENST00000604967 CDCA7LQ96GN5 454 aa13.75□□□□□ -0.21
TUBE1-210ENST00000604967 SEC31BQ9NQW1 1179 aa13.75□□□□□ -0.21
TUBE1-210ENST00000604967 ATP6V0A2Q9Y487 856 aa13.75□□□□□ -0.21
TUBE1-210ENST00000604967 KDM2BQ8NHM5 1336 aa13.74□□□□□ -0.21
TUBE1-210ENST00000604967 LRRC37AA6NMS7 1700 aa13.74□□□□□ -0.21
TUBE1-210ENST00000604967 FZD9O00144 591 aa13.74□□□□□ -0.21
TUBE1-210ENST00000604967 TOMM70O94826 608 aa13.74□□□□□ -0.21
TUBE1-210ENST00000604967 IARSP41252 1262 aaKnown RBP13.74□□□□□ -0.21
TUBE1-210ENST00000604967 FLIIQ13045 1269 aa13.74□□□□□ -0.21
TUBE1-210ENST00000604967 RTKN2Q8IZC4 609 aa13.74□□□□□ -0.21
TUBE1-210ENST00000604967 ZBTB38Q8NAP3 1195 aaPredicted RBP13.74□□□□□ -0.21
TUBE1-210ENST00000604967 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
TUBE1-210ENST00000604967 NEURL1BA8MQ27 555 aa13.73□□□□□ -0.21
TUBE1-210ENST00000604967 F6X3S4 739 aa13.73□□□□□ -0.21
TUBE1-210ENST00000604967 PCCAP05165 728 aaPredicted RBP13.73□□□□□ -0.21
TUBE1-210ENST00000604967 CASP7P55210 303 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms