RNA–Protein interactions for RNA: ENST00000604367.1

CCDC12-211, Transcript of coiled-coil domain containing 12, humanhuman

Gene CCDC12, Length 2,412 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-211ENST00000604367 TEX13AQ9BXU3 409 aaPredicted RBP18.3■□□□□ 0.52
CCDC12-211ENST00000604367 BOLA2Q9H3K6 86 aa18.3■□□□□ 0.52
CCDC12-211ENST00000604367 NUP188Q5SRE5 1749 aa18.3■□□□□ 0.52
CCDC12-211ENST00000604367 VSIG10Q8N0Z9 540 aa18.3■□□□□ 0.52
CCDC12-211ENST00000604367 CCDC191Q8NCU4 936 aa18.3■□□□□ 0.52
CCDC12-211ENST00000604367 PHLPP1O60346 1717 aa18.29■□□□□ 0.52
CCDC12-211ENST00000604367 PRIM1P49642 420 aaKnown RBP18.29■□□□□ 0.52
CCDC12-211ENST00000604367 GSE1Q14687 1217 aa18.29■□□□□ 0.52
CCDC12-211ENST00000604367 BCL9O00512 1426 aa18.29■□□□□ 0.52
CCDC12-211ENST00000604367 COL15A1P39059 1388 aa18.29■□□□□ 0.52
CCDC12-211ENST00000604367 EVI5LQ96CN4 794 aa18.29■□□□□ 0.52
CCDC12-211ENST00000604367 SLC4A9Q96Q91 983 aa18.29■□□□□ 0.52
CCDC12-211ENST00000604367 KIF6Q6ZMV9 814 aa18.28■□□□□ 0.52
CCDC12-211ENST00000604367 MCM4P33991 863 aa18.28■□□□□ 0.52
CCDC12-211ENST00000604367 KIAA1211Q6ZU35 1233 aa18.28■□□□□ 0.52
CCDC12-211ENST00000604367 CIZ1Q9ULV3 898 aaPredicted RBP18.28■□□□□ 0.52
CCDC12-211ENST00000604367 CCDC9Q9Y3X0 531 aaKnown RBP18.28■□□□□ 0.52
CCDC12-211ENST00000604367 TCIRG1Q13488 830 aa18.27■□□□□ 0.52
CCDC12-211ENST00000604367 DDB1Q16531 1140 aa18.27■□□□□ 0.52
CCDC12-211ENST00000604367 TNNI3KQ59H18 835 aa18.27■□□□□ 0.52
CCDC12-211ENST00000604367 FPGT-TNNI3KV9GXZ4 949 aa18.27■□□□□ 0.52
CCDC12-211ENST00000604367 SPATA31A1Q5TZJ5 1347 aa18.27■□□□□ 0.52
CCDC12-211ENST00000604367 PLCH1Q4KWH8 1693 aa18.27■□□□□ 0.51
CCDC12-211ENST00000604367 HSPA4P34932 840 aa18.27■□□□□ 0.51
CCDC12-211ENST00000604367 ANAPC15P60006 121 aa18.27■□□□□ 0.51
CCDC12-211ENST00000604367 TNPO1Q92973 898 aaKnown RBP18.27■□□□□ 0.51
CCDC12-211ENST00000604367 UPF3BQ9BZI7 483 aaKnown RBP18.27■□□□□ 0.51
CCDC12-211ENST00000604367 DBNLQ9UJU6 430 aaKnown RBP18.27■□□□□ 0.51
CCDC12-211ENST00000604367 NOL8Q76FK4 1167 aaKnown RBP18.26■□□□□ 0.51
CCDC12-211ENST00000604367 ISCA1Q9BUE6 129 aa18.26■□□□□ 0.51
CCDC12-211ENST00000604367 LSG1Q9H089 658 aaKnown RBP18.26■□□□□ 0.51
CCDC12-211ENST00000604367 RAD50Q92878 1312 aa18.26■□□□□ 0.51
CCDC12-211ENST00000604367 TJP1Q07157 1748 aa18.25■□□□□ 0.51
CCDC12-211ENST00000604367 RAB3GAP1Q15042 981 aa18.25■□□□□ 0.51
CCDC12-211ENST00000604367 RUFY2Q8WXA3 655 aa18.25■□□□□ 0.51
CCDC12-211ENST00000604367 ACSBG1Q96GR2 724 aa18.25■□□□□ 0.51
CCDC12-211ENST00000604367 ZNF594Q96JF6 807 aaPredicted RBP18.25■□□□□ 0.51
CCDC12-211ENST00000604367 CYP19A1P11511 503 aaPredicted RBP18.24■□□□□ 0.51
CCDC12-211ENST00000604367 FAM89AQ96GI7 184 aa18.24■□□□□ 0.51
CCDC12-211ENST00000604367 CCDC85AQ96PX6 553 aaPredicted RBP18.24■□□□□ 0.51
CCDC12-211ENST00000604367 ZBTB1Q9Y2K1 713 aa18.24■□□□□ 0.51
CCDC12-211ENST00000604367 TOM1O60784 492 aa18.24■□□□□ 0.51
CCDC12-211ENST00000604367 EDC3Q96F86 508 aaKnown RBP18.24■□□□□ 0.51
CCDC12-211ENST00000604367 DBNDD2Q9BQY9 259 aa18.24■□□□□ 0.51
CCDC12-211ENST00000604367 FSD1Q9BTV5 496 aa18.24■□□□□ 0.51
CCDC12-211ENST00000604367 NDUFB9Q9Y6M9 179 aa18.24■□□□□ 0.51
CCDC12-211ENST00000604367 GPTP24298 496 aa18.23■□□□□ 0.51
CCDC12-211ENST00000604367 HLFQ16534 295 aa18.23■□□□□ 0.51
CCDC12-211ENST00000604367 ZGPATQ8N5A5 531 aaKnown RBP18.23■□□□□ 0.51
CCDC12-211ENST00000604367 FAM227BQ96M60 508 aa18.23■□□□□ 0.51
CCDC12-211ENST00000604367 EPB41L2O43491 1005 aaKnown RBP18.23■□□□□ 0.51
CCDC12-211ENST00000604367 CDCA7Q9BWT1 371 aaPredicted RBP18.23■□□□□ 0.51
CCDC12-211ENST00000604367 MAP3K15Q6ZN16 1313 aa18.22■□□□□ 0.51
CCDC12-211ENST00000604367 PTH1RQ03431 593 aa18.22■□□□□ 0.51
CCDC12-211ENST00000604367 SSFA2P28290 1259 aa18.22■□□□□ 0.51
CCDC12-211ENST00000604367 NMIQ13287 307 aaPredicted RBP18.22■□□□□ 0.51
CCDC12-211ENST00000604367 LRRC24Q50LG9 513 aa18.22■□□□□ 0.51
CCDC12-211ENST00000604367 ATG9AQ7Z3C6 839 aa18.22■□□□□ 0.51
CCDC12-211ENST00000604367 TMX3Q96JJ7 454 aa18.22■□□□□ 0.51
CCDC12-211ENST00000604367 NEUROD6Q96NK8 337 aa18.22■□□□□ 0.51
CCDC12-211ENST00000604367 THRAP3Q9Y2W1 955 aaKnown RBP18.22■□□□□ 0.51
CCDC12-211ENST00000604367 WNK3Q9BYP7 1800 aa18.22■□□□□ 0.51
CCDC12-211ENST00000604367 RASEFQ8IZ41 740 aa18.21■□□□□ 0.51
CCDC12-211ENST00000604367 DOT1LQ8TEK3 1739 aa18.21■□□□□ 0.51
CCDC12-211ENST00000604367 GIGYF2Q6Y7W6 1299 aaKnown RBP18.21■□□□□ 0.51
CCDC12-211ENST00000604367 SYNE4Q8N205 404 aa18.21■□□□□ 0.51
CCDC12-211ENST00000604367 MARCH10Q8NA82 808 aaPredicted RBP18.21■□□□□ 0.51
CCDC12-211ENST00000604367 SNX14Q9Y5W7 946 aa18.21■□□□□ 0.51
CCDC12-211ENST00000604367 LRP6O75581 1613 aa18.2■□□□□ 0.5
CCDC12-211ENST00000604367 DNAJC2Q99543 621 aaKnown RBP18.2■□□□□ 0.5
CCDC12-211ENST00000604367 TBC1D2BQ9UPU7 963 aa18.2■□□□□ 0.5
CCDC12-211ENST00000604367 NRAPQ86VF7 1730 aa18.2■□□□□ 0.5
CCDC12-211ENST00000604367 SPATA31A5Q5VU36 1347 aa18.2■□□□□ 0.5
CCDC12-211ENST00000604367 SPATA31A7Q8IWB4 1347 aa18.2■□□□□ 0.5
CCDC12-211ENST00000604367 ATP5JP18859 108 aa18.2■□□□□ 0.5
CCDC12-211ENST00000604367 TIMM10P62072 90 aa18.2■□□□□ 0.5
CCDC12-211ENST00000604367 TRIM28Q13263 835 aaKnown RBP18.2■□□□□ 0.5
CCDC12-211ENST00000604367 PUS3Q9BZE2 481 aaKnown RBP18.2■□□□□ 0.5
CCDC12-211ENST00000604367 A0A0D9SFI3 127 aa18.19■□□□□ 0.5
CCDC12-211ENST00000604367 EYA2O00167 538 aa18.19■□□□□ 0.5
CCDC12-211ENST00000604367 HIP1O00291 1037 aa18.19■□□□□ 0.5
CCDC12-211ENST00000604367 IL15P40933 162 aaPredicted RBP18.19■□□□□ 0.5
CCDC12-211ENST00000604367 MCM2P49736 904 aa18.19■□□□□ 0.5
CCDC12-211ENST00000604367 PKP1Q13835 747 aa18.19■□□□□ 0.5
CCDC12-211ENST00000604367 CCDC57Q2TAC2 916 aa18.19■□□□□ 0.5
CCDC12-211ENST00000604367 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.19■□□□□ 0.5
CCDC12-211ENST00000604367 ZBTB38Q8NAP3 1195 aaPredicted RBP18.19■□□□□ 0.5
CCDC12-211ENST00000604367 IL17RAQ96F46 866 aa18.19■□□□□ 0.5
CCDC12-211ENST00000604367 GBP4Q96PP9 640 aa18.19■□□□□ 0.5
CCDC12-211ENST00000604367 PCCAP05165 728 aaPredicted RBP18.18■□□□□ 0.5
CCDC12-211ENST00000604367 PRPF40BQ6NWY9 871 aaKnown RBP18.18■□□□□ 0.5
CCDC12-211ENST00000604367 UBAP1LF5GYI3 381 aa18.18■□□□□ 0.5
CCDC12-211ENST00000604367 NLRP10Q86W26 655 aa18.18■□□□□ 0.5
CCDC12-211ENST00000604367 CCDC171Q6TFL3 1326 aa18.17■□□□□ 0.5
CCDC12-211ENST00000604367 DDX11L8A8MPP1 907 aa18.17■□□□□ 0.5
CCDC12-211ENST00000604367 DZIP3Q86Y13 1208 aaKnown RBP18.17■□□□□ 0.5
CCDC12-211ENST00000604367 CWC22Q9HCG8 908 aaKnown RBP18.17■□□□□ 0.5
CCDC12-211ENST00000604367 TRAK2O60296 914 aa18.17■□□□□ 0.5
CCDC12-211ENST00000604367 ATP6V1AP38606 617 aa18.17■□□□□ 0.5
CCDC12-211ENST00000604367 KCNJ4P48050 445 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms