RNA–Protein interactions for RNA: ENST00000604236.5

FGFR2-222, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best)

Gene FGFR2, Length 3,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-222ENST00000604236 TSC1Q92574 1164 aa18.42■□□□□ 0.54
FGFR2-222ENST00000604236 NCOA5Q9HCD5 579 aaKnown RBP18.42■□□□□ 0.54
FGFR2-222ENST00000604236 LMBRD1Q9NUN5 540 aa18.42■□□□□ 0.54
FGFR2-222ENST00000604236 PLEKHG1Q9ULL1 1385 aa18.42■□□□□ 0.54
FGFR2-222ENST00000604236 BLOC1S2Q6QNY1 142 aa18.42■□□□□ 0.54
FGFR2-222ENST00000604236 ITSN1Q15811 1721 aa18.42■□□□□ 0.54
FGFR2-222ENST00000604236 FAM182BQ5T319 152 aa18.41■□□□□ 0.54
FGFR2-222ENST00000604236 ZNF589Q86UQ0 364 aaPredicted RBP18.41■□□□□ 0.54
FGFR2-222ENST00000604236 CREBRFQ8IUR6 639 aa18.41■□□□□ 0.54
FGFR2-222ENST00000604236 PUS3Q9BZE2 481 aaKnown RBP18.41■□□□□ 0.54
FGFR2-222ENST00000604236 CEP170BQ9Y4F5 1589 aaPredicted RBP18.41■□□□□ 0.54
FGFR2-222ENST00000604236 JAK2O60674 1132 aa18.4■□□□□ 0.54
FGFR2-222ENST00000604236 IDH1O75874 414 aaKnown RBP18.4■□□□□ 0.54
FGFR2-222ENST00000604236 SYT1P21579 422 aa18.4■□□□□ 0.54
FGFR2-222ENST00000604236 BRF1Q92994 677 aa18.4■□□□□ 0.54
FGFR2-222ENST00000604236 LARP1Q6PKG0 1096 aaKnown RBP18.4■□□□□ 0.54
FGFR2-222ENST00000604236 OVOS2A0A0J9YW53 1432 aa18.4■□□□□ 0.54
FGFR2-222ENST00000604236 OVOS2Q6IE36 1432 aa18.4■□□□□ 0.54
FGFR2-222ENST00000604236 A0A0G2JLW4 131 aa18.39■□□□□ 0.53
FGFR2-222ENST00000604236 GTF2E1P29083 439 aaPredicted RBP18.39■□□□□ 0.53
FGFR2-222ENST00000604236 TTC12Q9H892 705 aaPredicted RBP18.39■□□□□ 0.53
FGFR2-222ENST00000604236 HSP90AB4PQ58FF6 505 aa18.39■□□□□ 0.53
FGFR2-222ENST00000604236 TTLL5Q6EMB2 1281 aa18.39■□□□□ 0.53
FGFR2-222ENST00000604236 ARHGEF25Q86VW2 580 aa18.39■□□□□ 0.53
FGFR2-222ENST00000604236 IFNL2Q8IZJ0 200 aa18.39■□□□□ 0.53
FGFR2-222ENST00000604236 CIZ1Q9ULV3 898 aaPredicted RBP18.39■□□□□ 0.53
FGFR2-222ENST00000604236 SASH1O94885 1247 aa18.38■□□□□ 0.53
FGFR2-222ENST00000604236 AMOTQ4VCS5 1084 aa18.38■□□□□ 0.53
FGFR2-222ENST00000604236 LRRC24Q50LG9 513 aa18.38■□□□□ 0.53
FGFR2-222ENST00000604236 CRB1P82279 1406 aa18.38■□□□□ 0.53
FGFR2-222ENST00000604236 STX6O43752 255 aa18.38■□□□□ 0.53
FGFR2-222ENST00000604236 SSH3Q8TE77 659 aa18.38■□□□□ 0.53
FGFR2-222ENST00000604236 GNL2Q13823 731 aaKnown RBP18.37■□□□□ 0.53
FGFR2-222ENST00000604236 ZNF592Q92610 1267 aa18.37■□□□□ 0.53
FGFR2-222ENST00000604236 SGSM2O43147 1006 aa18.37■□□□□ 0.53
FGFR2-222ENST00000604236 KLHL40Q2TBA0 621 aa18.37■□□□□ 0.53
FGFR2-222ENST00000604236 RUFY3Q7L099 469 aa18.37■□□□□ 0.53
FGFR2-222ENST00000604236 GPHNQ9NQX3 736 aaPredicted RBP18.37■□□□□ 0.53
FGFR2-222ENST00000604236 LIMCH1Q9UPQ0 1083 aa18.37■□□□□ 0.53
FGFR2-222ENST00000604236 IGKV5-2P06315 115 aa18.37■□□□□ 0.53
FGFR2-222ENST00000604236 HSP90AA4PQ58FG1 418 aa18.37■□□□□ 0.53
FGFR2-222ENST00000604236 CNNM1Q9NRU3 951 aa18.37■□□□□ 0.53
FGFR2-222ENST00000604236 HYPKQ9NX55 129 aa18.37■□□□□ 0.53
FGFR2-222ENST00000604236 MON2Q7Z3U7 1717 aa18.37■□□□□ 0.53
FGFR2-222ENST00000604236 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.37■□□□□ 0.53
FGFR2-222ENST00000604236 LINS1Q8NG48 757 aa18.36■□□□□ 0.53
FGFR2-222ENST00000604236 FTOQ9C0B1 505 aaKnown RBP eCLIP18.36■□□□□ 0.53
FGFR2-222ENST00000604236 ATP10DQ9P241 1426 aa18.36■□□□□ 0.53
FGFR2-222ENST00000604236 CYP27B1O15528 508 aa18.36■□□□□ 0.53
FGFR2-222ENST00000604236 POLR3DP05423 398 aaPredicted RBP18.36■□□□□ 0.53
FGFR2-222ENST00000604236 C19orf44Q9H6X5 657 aa18.36■□□□□ 0.53
FGFR2-222ENST00000604236 KIAA0232Q92628 1395 aa18.36■□□□□ 0.53
FGFR2-222ENST00000604236 VPS53Q5VIR6 699 aa18.36■□□□□ 0.53
FGFR2-222ENST00000604236 CREB3L3Q68CJ9 461 aa18.35■□□□□ 0.53
FGFR2-222ENST00000604236 C3P01024 1663 aa18.35■□□□□ 0.53
FGFR2-222ENST00000604236 SF3A1Q15459 793 aaKnown RBP18.35■□□□□ 0.53
FGFR2-222ENST00000604236 GJB4Q9NTQ9 266 aa18.35■□□□□ 0.53
FGFR2-222ENST00000604236 RIMS1Q86UR5 1692 aaKnown RBP18.35■□□□□ 0.53
FGFR2-222ENST00000604236 IBTKQ9P2D0 1353 aaPredicted RBP18.35■□□□□ 0.53
FGFR2-222ENST00000604236 SNRPA1P09661 255 aaKnown RBP18.35■□□□□ 0.53
FGFR2-222ENST00000604236 ME3Q16798 604 aa18.35■□□□□ 0.53
FGFR2-222ENST00000604236 CCDC57Q2TAC2 916 aa18.35■□□□□ 0.53
FGFR2-222ENST00000604236 PI4K2BQ8TCG2 481 aa18.35■□□□□ 0.53
FGFR2-222ENST00000604236 DDX21Q9NR30 783 aaKnown RBP eCLIP18.35■□□□□ 0.53
FGFR2-222ENST00000604236 TSPY26PQ9H489 355 aa18.34■□□□□ 0.53
FGFR2-222ENST00000604236 CWC22Q9HCG8 908 aaKnown RBP18.34■□□□□ 0.53
FGFR2-222ENST00000604236 ARHGEF10O15013 1369 aa18.34■□□□□ 0.53
FGFR2-222ENST00000604236 IFIT1P09914 478 aaKnown RBP18.33■□□□□ 0.53
FGFR2-222ENST00000604236 APOBRQ0VD83 1088 aa18.33■□□□□ 0.53
FGFR2-222ENST00000604236 GCKRQ14397 625 aa18.33■□□□□ 0.53
FGFR2-222ENST00000604236 ASAP1Q9ULH1 1129 aa18.33■□□□□ 0.53
FGFR2-222ENST00000604236 UBR1Q8IWV7 1749 aa18.33■□□□□ 0.52
FGFR2-222ENST00000604236 WDR33Q9C0J8 1336 aaKnown RBP18.33■□□□□ 0.52
FGFR2-222ENST00000604236 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.33■□□□□ 0.52
FGFR2-222ENST00000604236 BIN1O00499 593 aa18.32■□□□□ 0.52
FGFR2-222ENST00000604236 CDC37L1Q7L3B6 337 aa18.32■□□□□ 0.52
FGFR2-222ENST00000604236 DNAJC10Q8IXB1 793 aa18.32■□□□□ 0.52
FGFR2-222ENST00000604236 SLC52A2Q9HAB3 445 aa18.32■□□□□ 0.52
FGFR2-222ENST00000604236 UTRNP46939 3433 aa18.32■□□□□ 0.52
FGFR2-222ENST00000604236 USP31Q70CQ4 1352 aa18.32■□□□□ 0.52
FGFR2-222ENST00000604236 NEURL1BA8MQ27 555 aa18.32■□□□□ 0.52
FGFR2-222ENST00000604236 ZRSR1Q15695 479 aaKnown RBP18.32■□□□□ 0.52
FGFR2-222ENST00000604236 TPCN1Q9ULQ1 816 aa18.32■□□□□ 0.52
FGFR2-222ENST00000604236 AKAP12Q02952 1782 aa18.32■□□□□ 0.52
FGFR2-222ENST00000604236 DBNLQ9UJU6 430 aaKnown RBP18.32■□□□□ 0.52
FGFR2-222ENST00000604236 TTC39AQ5SRH9 613 aa18.31■□□□□ 0.52
FGFR2-222ENST00000604236 RNF20Q5VTR2 975 aa18.31■□□□□ 0.52
FGFR2-222ENST00000604236 ZCRB1Q8TBF4 217 aaKnown RBP18.31■□□□□ 0.52
FGFR2-222ENST00000604236 CEP126Q9P2H0 1117 aa18.31■□□□□ 0.52
FGFR2-222ENST00000604236 ABCF2Q9UG63 623 aa18.31■□□□□ 0.52
FGFR2-222ENST00000604236 ISY1Q9ULR0 285 aaKnown RBP18.31■□□□□ 0.52
FGFR2-222ENST00000604236 Q6ZUG5 572 aa18.31■□□□□ 0.52
FGFR2-222ENST00000604236 SYAP1Q96A49 352 aaPredicted RBP18.31■□□□□ 0.52
FGFR2-222ENST00000604236 RGS12O14924 1447 aa18.31■□□□□ 0.52
FGFR2-222ENST00000604236 KIF24Q5T7B8 1368 aa18.31■□□□□ 0.52
FGFR2-222ENST00000604236 PHKG2P15735 406 aa18.31■□□□□ 0.52
FGFR2-222ENST00000604236 CPLX1O14810 134 aa18.3■□□□□ 0.52
FGFR2-222ENST00000604236 TAF5LO75529 589 aa18.3■□□□□ 0.52
FGFR2-222ENST00000604236 PTPN21Q16825 1174 aa18.3■□□□□ 0.52
FGFR2-222ENST00000604236 TMOD3Q9NYL9 352 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms