RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 OGFRQ9NZT2 677 aa18.1■□□□□ 0.49
LYSMD4-211ENST00000604213 CHD2O14647 1828 aaKnown RBP18.1■□□□□ 0.49
LYSMD4-211ENST00000604213 NWD1Q149M9 1564 aa18.1■□□□□ 0.49
LYSMD4-211ENST00000604213 PI4KAP2A4QPH2 592 aa18.09■□□□□ 0.49
LYSMD4-211ENST00000604213 MTX1Q13505 466 aa18.09■□□□□ 0.49
LYSMD4-211ENST00000604213 PI4KAP1Q8N8J0 262 aa18.09■□□□□ 0.49
LYSMD4-211ENST00000604213 TRIM5Q9C035 493 aa18.09■□□□□ 0.49
LYSMD4-211ENST00000604213 TNNT1P13805 278 aa18.09■□□□□ 0.49
LYSMD4-211ENST00000604213 EIF2S2P20042 333 aaKnown RBP18.09■□□□□ 0.49
LYSMD4-211ENST00000604213 LEO1Q8WVC0 666 aaPredicted RBP18.09■□□□□ 0.49
LYSMD4-211ENST00000604213 SPATA32Q96LK8 384 aa18.09■□□□□ 0.49
LYSMD4-211ENST00000604213 TFIP11Q9UBB9 837 aaKnown RBP18.09■□□□□ 0.49
LYSMD4-211ENST00000604213 CTNNA3Q9UI47 895 aa18.09■□□□□ 0.49
LYSMD4-211ENST00000604213 NPHP3Q7Z494 1330 aa18.09■□□□□ 0.49
LYSMD4-211ENST00000604213 ADGRL3Q9HAR2 1447 aa18.08■□□□□ 0.49
LYSMD4-211ENST00000604213 SLC27A2O14975 620 aa18.08■□□□□ 0.48
LYSMD4-211ENST00000604213 GPATCH3Q96I76 525 aa18.08■□□□□ 0.48
LYSMD4-211ENST00000604213 FAM227BQ96M60 508 aa18.08■□□□□ 0.48
LYSMD4-211ENST00000604213 CHPF2Q9P2E5 772 aa18.08■□□□□ 0.48
LYSMD4-211ENST00000604213 GOLGA6L4A6NEF3 574 aa18.07■□□□□ 0.48
LYSMD4-211ENST00000604213 PSMA5P28066 241 aa18.07■□□□□ 0.48
LYSMD4-211ENST00000604213 LARP1Q6PKG0 1096 aaKnown RBP18.07■□□□□ 0.48
LYSMD4-211ENST00000604213 CACTINQ8WUQ7 758 aaKnown RBP18.07■□□□□ 0.48
LYSMD4-211ENST00000604213 PAXBP1Q9Y5B6 917 aa18.07■□□□□ 0.48
LYSMD4-211ENST00000604213 TMEM2Q9UHN6 1383 aa18.07■□□□□ 0.48
LYSMD4-211ENST00000604213 IFIT2P09913 472 aaKnown RBP18.06■□□□□ 0.48
LYSMD4-211ENST00000604213 HOXC9P31274 260 aa18.06■□□□□ 0.48
LYSMD4-211ENST00000604213 KCNJ4P48050 445 aa18.06■□□□□ 0.48
LYSMD4-211ENST00000604213 ALDH8A1Q9H2A2 487 aaPredicted RBP18.06■□□□□ 0.48
LYSMD4-211ENST00000604213 SNRKQ9NRH2 765 aa18.06■□□□□ 0.48
LYSMD4-211ENST00000604213 NR1I2O75469 434 aa18.06■□□□□ 0.48
LYSMD4-211ENST00000604213 EIF4A1P60842 406 aaKnown RBP18.06■□□□□ 0.48
LYSMD4-211ENST00000604213 NMIQ13287 307 aaPredicted RBP18.06■□□□□ 0.48
LYSMD4-211ENST00000604213 PGBD1Q96JS3 809 aa18.06■□□□□ 0.48
LYSMD4-211ENST00000604213 ADCY9O60503 1353 aa18.06■□□□□ 0.48
LYSMD4-211ENST00000604213 ZNF165P49910 485 aa18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 ANKRD1Q15327 319 aa18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 CCDC144BQ3MJ40 725 aa18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 CCDC144CPQ8IYA2 1237 aa18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 DNAJC25Q9H1X3 360 aa18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 CLIP2Q9UDT6 1046 aa18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 RPS6KB1P23443 525 aa18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 CDC25BP30305 580 aa18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 TOB2Q14106 344 aaPredicted RBP18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 NAA30Q147X3 362 aaPredicted RBP18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 CCDC112Q8NEF3 446 aa18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 TCEANC2Q96MN5 208 aa18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 CGNQ9P2M7 1197 aaKnown RBP18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 PA2G4Q9UQ80 394 aaKnown RBP18.05■□□□□ 0.48
LYSMD4-211ENST00000604213 HOXB7P09629 217 aa18.04■□□□□ 0.48
LYSMD4-211ENST00000604213 BLOC1S2Q6QNY1 142 aa18.04■□□□□ 0.48
LYSMD4-211ENST00000604213 ERC1Q8IUD2 1116 aa18.04■□□□□ 0.48
LYSMD4-211ENST00000604213 CEMIPQ8WUJ3 1361 aa18.04■□□□□ 0.48
LYSMD4-211ENST00000604213 HIP1O00291 1037 aa18.04■□□□□ 0.48
LYSMD4-211ENST00000604213 IGSF3O75054 1194 aa18.04■□□□□ 0.48
LYSMD4-211ENST00000604213 TPD52L1Q16890 204 aaPredicted RBP18.04■□□□□ 0.48
LYSMD4-211ENST00000604213 AACSQ86V21 672 aa18.04■□□□□ 0.48
LYSMD4-211ENST00000604213 DDX41Q9UJV9 622 aaKnown RBP18.04■□□□□ 0.48
LYSMD4-211ENST00000604213 TAF6LQ9Y6J9 622 aa18.04■□□□□ 0.48
LYSMD4-211ENST00000604213 PIK3C2AO00443 1686 aa18.04■□□□□ 0.48
LYSMD4-211ENST00000604213 NPHP4O75161 1426 aaPredicted RBP18.04■□□□□ 0.48
LYSMD4-211ENST00000604213 NGDNQ8NEJ9 315 aaKnown RBP18.03■□□□□ 0.48
LYSMD4-211ENST00000604213 ANXA1P04083 346 aa18.03■□□□□ 0.48
LYSMD4-211ENST00000604213 GIGYF1O75420 1035 aaPredicted RBP18.02■□□□□ 0.48
LYSMD4-211ENST00000604213 BICD2Q8TD16 824 aa18.02■□□□□ 0.48
LYSMD4-211ENST00000604213 A0A0D9SFI3 127 aa18.02■□□□□ 0.47
LYSMD4-211ENST00000604213 CAVIN2O95810 425 aa18.02■□□□□ 0.47
LYSMD4-211ENST00000604213 NLRP6P59044 892 aa18.02■□□□□ 0.47
LYSMD4-211ENST00000604213 CEP135Q66GS9 1140 aa18.02■□□□□ 0.47
LYSMD4-211ENST00000604213 LTV1Q96GA3 475 aaPredicted RBP18.02■□□□□ 0.47
LYSMD4-211ENST00000604213 DIP2BQ9P265 1576 aa18.01■□□□□ 0.47
LYSMD4-211ENST00000604213 RESTQ13127 1097 aa18.01■□□□□ 0.47
LYSMD4-211ENST00000604213 IQCB1Q15051 598 aa18.01■□□□□ 0.47
LYSMD4-211ENST00000604213 RNF20Q5VTR2 975 aa18.01■□□□□ 0.47
LYSMD4-211ENST00000604213 SARM1Q6SZW1 724 aa18.01■□□□□ 0.47
LYSMD4-211ENST00000604213 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.01■□□□□ 0.47
LYSMD4-211ENST00000604213 MORC2Q9Y6X9 1032 aaPredicted RBP18.01■□□□□ 0.47
LYSMD4-211ENST00000604213 KCNQ3O43525 872 aa18.01■□□□□ 0.47
LYSMD4-211ENST00000604213 GABPB1Q06547 395 aaPredicted RBP18.01■□□□□ 0.47
LYSMD4-211ENST00000604213 STK3Q13188 491 aa18.01■□□□□ 0.47
LYSMD4-211ENST00000604213 LRRC8AQ8IWT6 810 aa18.01■□□□□ 0.47
LYSMD4-211ENST00000604213 TNRQ92752 1358 aa18.01■□□□□ 0.47
LYSMD4-211ENST00000604213 MED23Q9ULK4 1368 aa18■□□□□ 0.47
LYSMD4-211ENST00000604213 RBM6P78332 1123 aaKnown RBP18■□□□□ 0.47
LYSMD4-211ENST00000604213 USHBP1Q8N6Y0 703 aa18■□□□□ 0.47
LYSMD4-211ENST00000604213 MED1Q15648 1581 aaPredicted RBP18■□□□□ 0.47
LYSMD4-211ENST00000604213 ALDH1L1O75891 902 aa17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 SASH1O94885 1247 aa17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 TSGA10IPQ3SY00 556 aa17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 KIF18AQ8NI77 898 aa17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 EAF2Q96CJ1 260 aaPredicted RBP17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 CHMP4AQ9BY43 222 aa17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 LGR6Q9HBX8 967 aa17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 JAK2O60674 1132 aa17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 ARID5BQ14865 1188 aa17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 PODXL2Q9NZ53 605 aa17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 C9orf78Q9NZ63 289 aaPredicted RBP17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 JCADQ9P266 1359 aa17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 PLEKHG1Q9ULL1 1385 aa17.99■□□□□ 0.47
LYSMD4-211ENST00000604213 USP27XA6NNY8 438 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms