RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 NBPF10Q6P3W6 841 aaKnown RBP15.83■□□□□ 0.12
PDLIM1P1-201ENST00000604187 NBPF15Q8N660 670 aa15.83■□□□□ 0.12
PDLIM1P1-201ENST00000604187 TLL2Q9Y6L7 1015 aa15.83■□□□□ 0.12
PDLIM1P1-201ENST00000604187 ABCC12Q96J65 1359 aa15.83■□□□□ 0.12
PDLIM1P1-201ENST00000604187 COL3A1P02461 1466 aaPredicted RBP15.83■□□□□ 0.12
PDLIM1P1-201ENST00000604187 COL4A5P29400 1685 aa15.83■□□□□ 0.12
PDLIM1P1-201ENST00000604187 RGL2O15211 777 aa15.82■□□□□ 0.12
PDLIM1P1-201ENST00000604187 SNRPA1P09661 255 aaKnown RBP15.82■□□□□ 0.12
PDLIM1P1-201ENST00000604187 CRY2Q49AN0 593 aa15.82■□□□□ 0.12
PDLIM1P1-201ENST00000604187 LARGE2Q8N3Y3 721 aa15.82■□□□□ 0.12
PDLIM1P1-201ENST00000604187 BCORQ6W2J9 1755 aa15.82■□□□□ 0.12
PDLIM1P1-201ENST00000604187 HLFQ16534 295 aa15.81■□□□□ 0.12
PDLIM1P1-201ENST00000604187 USP50Q70EL3 339 aaPredicted RBP15.81■□□□□ 0.12
PDLIM1P1-201ENST00000604187 SLC51AQ86UW1 340 aa15.81■□□□□ 0.12
PDLIM1P1-201ENST00000604187 PHACTR3Q96KR7 559 aa15.81■□□□□ 0.12
PDLIM1P1-201ENST00000604187 MCOLN1Q9GZU1 580 aa15.81■□□□□ 0.12
PDLIM1P1-201ENST00000604187 CA12O43570 354 aa15.8■□□□□ 0.12
PDLIM1P1-201ENST00000604187 MAP2K2P36507 400 aa15.8■□□□□ 0.12
PDLIM1P1-201ENST00000604187 CC2D2BQ6DHV5 1058 aa15.8■□□□□ 0.12
PDLIM1P1-201ENST00000604187 NUTM1Q86Y26 1132 aa15.8■□□□□ 0.12
PDLIM1P1-201ENST00000604187 KIF7Q2M1P5 1343 aa15.79■□□□□ 0.12
PDLIM1P1-201ENST00000604187 PRKAR2BP31323 418 aa15.79■□□□□ 0.12
PDLIM1P1-201ENST00000604187 SAPCD2Q86UD0 394 aa15.79■□□□□ 0.12
PDLIM1P1-201ENST00000604187 RPGRQ92834 1020 aaKnown RBP15.79■□□□□ 0.12
PDLIM1P1-201ENST00000604187 LTBP1Q14766 1721 aa15.78■□□□□ 0.12
PDLIM1P1-201ENST00000604187 CELF2O95319 508 aaKnown RBP15.78■□□□□ 0.12
PDLIM1P1-201ENST00000604187 CNGB1Q14028 1251 aaPredicted RBP15.78■□□□□ 0.12
PDLIM1P1-201ENST00000604187 MCM10Q7L590 875 aa15.78■□□□□ 0.12
PDLIM1P1-201ENST00000604187 NIM1KQ8IY84 436 aa15.78■□□□□ 0.12
PDLIM1P1-201ENST00000604187 CACNA1SQ13698 1873 aa15.78■□□□□ 0.12
PDLIM1P1-201ENST00000604187 CLSPNQ9HAW4 1339 aa15.77■□□□□ 0.12
PDLIM1P1-201ENST00000604187 TCERG1O14776 1098 aaKnown RBP15.77■□□□□ 0.12
PDLIM1P1-201ENST00000604187 BRPF1P55201 1214 aaPredicted RBP15.77■□□□□ 0.12
PDLIM1P1-201ENST00000604187 NYXQ9GZU5 481 aa15.77■□□□□ 0.12
PDLIM1P1-201ENST00000604187 ADARB2Q9NS39 739 aaKnown RBP15.77■□□□□ 0.12
PDLIM1P1-201ENST00000604187 GPRC5DQ9NZD1 345 aa15.77■□□□□ 0.12
PDLIM1P1-201ENST00000604187 PPEF1O14829 653 aaPredicted RBP15.76■□□□□ 0.11
PDLIM1P1-201ENST00000604187 PER1O15534 1290 aaPredicted RBP15.76■□□□□ 0.11
PDLIM1P1-201ENST00000604187 HOXA10P31260 410 aaPredicted RBP15.76■□□□□ 0.11
PDLIM1P1-201ENST00000604187 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
PDLIM1P1-201ENST00000604187 DGKZQ13574 1117 aa15.76■□□□□ 0.11
PDLIM1P1-201ENST00000604187 GRIPAP1Q4V328 841 aa15.76■□□□□ 0.11
PDLIM1P1-201ENST00000604187 RTF1Q92541 710 aaKnown RBP15.76■□□□□ 0.11
PDLIM1P1-201ENST00000604187 GLIS2Q9BZE0 524 aaPredicted RBP15.76■□□□□ 0.11
PDLIM1P1-201ENST00000604187 SIPA1L3O60292 1781 aaPredicted RBP15.75■□□□□ 0.11
PDLIM1P1-201ENST00000604187 PPIP5K2O43314 1243 aa15.75■□□□□ 0.11
PDLIM1P1-201ENST00000604187 NGEFQ8N5V2 710 aa15.75■□□□□ 0.11
PDLIM1P1-201ENST00000604187 RSPH6AQ9H0K4 717 aa15.75■□□□□ 0.11
PDLIM1P1-201ENST00000604187 ZNF408Q9H9D4 720 aa15.75■□□□□ 0.11
PDLIM1P1-201ENST00000604187 GPTP24298 496 aa15.74■□□□□ 0.11
PDLIM1P1-201ENST00000604187 GMPSP49915 693 aaPredicted RBP15.74■□□□□ 0.11
PDLIM1P1-201ENST00000604187 AOC3Q16853 763 aa15.74■□□□□ 0.11
PDLIM1P1-201ENST00000604187 CIAPIN1Q6FI81 312 aa15.74■□□□□ 0.11
PDLIM1P1-201ENST00000604187 RBM17Q96I25 401 aaKnown RBP15.74■□□□□ 0.11
PDLIM1P1-201ENST00000604187 HHIPL1Q96JK4 782 aa15.74■□□□□ 0.11
PDLIM1P1-201ENST00000604187 PCGF6Q9BYE7 350 aa15.74■□□□□ 0.11
PDLIM1P1-201ENST00000604187 RIC1Q4ADV7 1423 aa15.74■□□□□ 0.11
PDLIM1P1-201ENST00000604187 NPC1L1Q9UHC9 1359 aa15.74■□□□□ 0.11
PDLIM1P1-201ENST00000604187 DCTN1Q14203 1278 aa15.73■□□□□ 0.11
PDLIM1P1-201ENST00000604187 C3orf67Q6ZVT6 689 aa15.73■□□□□ 0.11
PDLIM1P1-201ENST00000604187 CRAMP1Q96RY5 1269 aa15.73■□□□□ 0.11
PDLIM1P1-201ENST00000604187 UBN2Q6ZU65 1347 aa15.72■□□□□ 0.11
PDLIM1P1-201ENST00000604187 CXCL9Q07325 125 aa15.72■□□□□ 0.11
PDLIM1P1-201ENST00000604187 ZNRF3Q9ULT6 936 aa15.72■□□□□ 0.11
PDLIM1P1-201ENST00000604187 IBTKQ9P2D0 1353 aaPredicted RBP15.72■□□□□ 0.11
PDLIM1P1-201ENST00000604187 TNRC18O15417 2968 aaPredicted RBP15.72■□□□□ 0.11
PDLIM1P1-201ENST00000604187 MAP3K15Q6ZN16 1313 aa15.71■□□□□ 0.11
PDLIM1P1-201ENST00000604187 ERVV-1B6SEH8 477 aa15.71■□□□□ 0.11
PDLIM1P1-201ENST00000604187 SUSD4Q5VX71 490 aa15.71■□□□□ 0.11
PDLIM1P1-201ENST00000604187 KIF6Q6ZMV9 814 aa15.71■□□□□ 0.11
PDLIM1P1-201ENST00000604187 TMX4Q9H1E5 349 aaPredicted RBP15.71■□□□□ 0.11
PDLIM1P1-201ENST00000604187 ZBTB3Q9H5J0 574 aa15.71■□□□□ 0.11
PDLIM1P1-201ENST00000604187 NOGQ13253 232 aa15.7■□□□□ 0.1
PDLIM1P1-201ENST00000604187 TTLL7Q6ZT98 887 aa15.7■□□□□ 0.1
PDLIM1P1-201ENST00000604187 ZIC5Q96T25 663 aa15.7■□□□□ 0.1
PDLIM1P1-201ENST00000604187 MIS18AQ9NYP9 233 aa15.7■□□□□ 0.1
PDLIM1P1-201ENST00000604187 PGAP2Q9UHJ9 254 aa15.7■□□□□ 0.1
PDLIM1P1-201ENST00000604187 NTSR2O95665 410 aa15.69■□□□□ 0.1
PDLIM1P1-201ENST00000604187 U2AF1L5P0DN76 240 aaPredicted RBP15.69■□□□□ 0.1
PDLIM1P1-201ENST00000604187 SOX10P56693 466 aa15.69■□□□□ 0.1
PDLIM1P1-201ENST00000604187 U2AF1Q01081 240 aaKnown RBP eCLIP15.69■□□□□ 0.1
PDLIM1P1-201ENST00000604187 CDC37L1Q7L3B6 337 aa15.69■□□□□ 0.1
PDLIM1P1-201ENST00000604187 TRPM4Q8TD43 1214 aa15.69■□□□□ 0.1
PDLIM1P1-201ENST00000604187 CFAP53Q96M91 514 aa15.69■□□□□ 0.1
PDLIM1P1-201ENST00000604187 ATP6V0A2Q9Y487 856 aa15.69■□□□□ 0.1
PDLIM1P1-201ENST00000604187 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
PDLIM1P1-201ENST00000604187 RAD17O75943 681 aa15.68■□□□□ 0.1
PDLIM1P1-201ENST00000604187 MYL6BP14649 208 aa15.68■□□□□ 0.1
PDLIM1P1-201ENST00000604187 HIRAP54198 1017 aaPredicted RBP15.68■□□□□ 0.1
PDLIM1P1-201ENST00000604187 HUNKP57058 714 aa15.68■□□□□ 0.1
PDLIM1P1-201ENST00000604187 TAF7Q15545 349 aaPredicted RBP15.68■□□□□ 0.1
PDLIM1P1-201ENST00000604187 SUPT20HQ8NEM7 779 aa15.68■□□□□ 0.1
PDLIM1P1-201ENST00000604187 ZC3H15Q8WU90 426 aaKnown RBP15.68■□□□□ 0.1
PDLIM1P1-201ENST00000604187 BCL2L13Q9BXK5 485 aa15.68■□□□□ 0.1
PDLIM1P1-201ENST00000604187 VPS33BQ9H267 617 aa15.68■□□□□ 0.1
PDLIM1P1-201ENST00000604187 RRP7AQ9Y3A4 280 aaKnown RBP15.68■□□□□ 0.1
PDLIM1P1-201ENST00000604187 PDE4DIPQ5VU43 2346 aa15.68■□□□□ 0.1
PDLIM1P1-201ENST00000604187 DPP8Q6V1X1 898 aaPredicted RBP15.67■□□□□ 0.1
PDLIM1P1-201ENST00000604187 NUDCQ9Y266 331 aa15.67■□□□□ 0.1
PDLIM1P1-201ENST00000604187 ABCC4O15439 1325 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms