RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 A0A087WZG4 1122 aa15.79■□□□□ 0.12
HERPUD2-207ENST00000603731 ERVV-1B6SEH8 477 aa15.79■□□□□ 0.12
HERPUD2-207ENST00000603731 HMGB2P26583 209 aaKnown RBP15.79■□□□□ 0.12
HERPUD2-207ENST00000603731 KCNQ4P56696 695 aa15.79■□□□□ 0.12
HERPUD2-207ENST00000603731 TXNRD1Q16881 649 aa15.79■□□□□ 0.12
HERPUD2-207ENST00000603731 RC3H1Q5TC82 1133 aaKnown RBP15.79■□□□□ 0.12
HERPUD2-207ENST00000603731 TBC1D2BQ9UPU7 963 aa15.79■□□□□ 0.12
HERPUD2-207ENST00000603731 CAPN15O75808 1086 aa15.78■□□□□ 0.12
HERPUD2-207ENST00000603731 GIGYF2Q6Y7W6 1299 aaKnown RBP15.78■□□□□ 0.12
HERPUD2-207ENST00000603731 CCDC191Q8NCU4 936 aa15.78■□□□□ 0.12
HERPUD2-207ENST00000603731 KLHL34Q8N239 644 aa15.77■□□□□ 0.12
HERPUD2-207ENST00000603731 ISCA1Q9BUE6 129 aa15.77■□□□□ 0.12
HERPUD2-207ENST00000603731 DCTPP1Q9H773 170 aa15.77■□□□□ 0.12
HERPUD2-207ENST00000603731 COL15A1P39059 1388 aa15.76■□□□□ 0.11
HERPUD2-207ENST00000603731 RGS3P49796 1198 aa15.76■□□□□ 0.11
HERPUD2-207ENST00000603731 SLC27A3Q5K4L6 730 aa15.76■□□□□ 0.11
HERPUD2-207ENST00000603731 ANKRD45Q5TZF3 282 aa15.76■□□□□ 0.11
HERPUD2-207ENST00000603731 UBE3BQ7Z3V4 1068 aa15.76■□□□□ 0.11
HERPUD2-207ENST00000603731 SUCLG2Q96I99 432 aa15.76■□□□□ 0.11
HERPUD2-207ENST00000603731 C4BP0C0L5 1744 aa15.76■□□□□ 0.11
HERPUD2-207ENST00000603731 BCORQ6W2J9 1755 aa15.75■□□□□ 0.11
HERPUD2-207ENST00000603731 RPS6KA4O75676 772 aa15.75■□□□□ 0.11
HERPUD2-207ENST00000603731 TRIM28Q13263 835 aaKnown RBP15.75■□□□□ 0.11
HERPUD2-207ENST00000603731 HLFQ16534 295 aa15.75■□□□□ 0.11
HERPUD2-207ENST00000603731 PPP1R42Q7Z4L9 355 aa15.75■□□□□ 0.11
HERPUD2-207ENST00000603731 ZNF652Q9Y2D9 606 aa15.75■□□□□ 0.11
HERPUD2-207ENST00000603731 RTCBQ9Y3I0 505 aaKnown RBP15.75■□□□□ 0.11
HERPUD2-207ENST00000603731 PNMA6EA0A0J9YXQ4 647 aa15.74■□□□□ 0.11
HERPUD2-207ENST00000603731 H7C1W4 665 aa15.74■□□□□ 0.11
HERPUD2-207ENST00000603731 GNPATO15228 680 aa15.74■□□□□ 0.11
HERPUD2-207ENST00000603731 SRGAP3O43295 1099 aa15.74■□□□□ 0.11
HERPUD2-207ENST00000603731 NUCB1Q02818 461 aa15.74■□□□□ 0.11
HERPUD2-207ENST00000603731 AK7Q96M32 723 aa15.74■□□□□ 0.11
HERPUD2-207ENST00000603731 GPBP1L1Q9HC44 474 aaPredicted RBP15.74■□□□□ 0.11
HERPUD2-207ENST00000603731 YBX3P16989 372 aaKnown RBP eCLIP15.73■□□□□ 0.11
HERPUD2-207ENST00000603731 GPTP24298 496 aa15.73■□□□□ 0.11
HERPUD2-207ENST00000603731 CHD1LQ86WJ1 897 aa15.73■□□□□ 0.11
HERPUD2-207ENST00000603731 SKAP1Q86WV1 359 aa15.73■□□□□ 0.11
HERPUD2-207ENST00000603731 NLGN2Q8NFZ4 835 aa15.73■□□□□ 0.11
HERPUD2-207ENST00000603731 SSH3Q8TE77 659 aa15.73■□□□□ 0.11
HERPUD2-207ENST00000603731 JARID2Q92833 1246 aaPredicted RBP15.73■□□□□ 0.11
HERPUD2-207ENST00000603731 BICC1Q9H694 974 aaKnown RBP15.73■□□□□ 0.11
HERPUD2-207ENST00000603731 CAMTA2O94983 1202 aa15.72■□□□□ 0.11
HERPUD2-207ENST00000603731 MTX1Q13505 466 aa15.72■□□□□ 0.11
HERPUD2-207ENST00000603731 POLA2Q14181 598 aa15.72■□□□□ 0.11
HERPUD2-207ENST00000603731 LNPKQ9C0E8 428 aa15.72■□□□□ 0.11
HERPUD2-207ENST00000603731 PCCAP05165 728 aaPredicted RBP15.71■□□□□ 0.11
HERPUD2-207ENST00000603731 HSP90AB4PQ58FF6 505 aa15.71■□□□□ 0.11
HERPUD2-207ENST00000603731 RTL5Q5HYW3 569 aaPredicted RBP15.71■□□□□ 0.11
HERPUD2-207ENST00000603731 NLRP10Q86W26 655 aa15.71■□□□□ 0.11
HERPUD2-207ENST00000603731 COL24A1Q17RW2 1714 aa15.71■□□□□ 0.1
HERPUD2-207ENST00000603731 SCN7AQ01118 1682 aa15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 APBB1O00213 710 aa15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 ZPR1O75312 459 aa15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 SURF6O75683 361 aaKnown RBP15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 CASP7P55210 303 aa15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 PARP10Q53GL7 1025 aa15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 COL13A1Q5TAT6 717 aaPredicted RBP15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 CLEC4GQ6UXB4 293 aa15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 ZNF34Q8IZ26 560 aa15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 ZBTB38Q8NAP3 1195 aaPredicted RBP15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 ZNF526Q8TF50 670 aaPredicted RBP15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 KAZALD1Q96I82 304 aa15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 LRRC4BQ9NT99 713 aa15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 EXOC6BQ9Y2D4 811 aa15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 MYH3P11055 1940 aa15.7■□□□□ 0.1
HERPUD2-207ENST00000603731 RGL2O15211 777 aa15.69■□□□□ 0.1
HERPUD2-207ENST00000603731 RAB11FIP3O75154 756 aa15.69■□□□□ 0.1
HERPUD2-207ENST00000603731 OS9Q13438 667 aaPredicted RBP15.69■□□□□ 0.1
HERPUD2-207ENST00000603731 TRAPPC3LQ5T215 181 aa15.69■□□□□ 0.1
HERPUD2-207ENST00000603731 NARFQ9UHQ1 456 aa15.69■□□□□ 0.1
HERPUD2-207ENST00000603731 TRMT112Q9UI30 125 aaKnown RBP15.69■□□□□ 0.1
HERPUD2-207ENST00000603731 CHMP3Q9Y3E7 222 aa15.69■□□□□ 0.1
HERPUD2-207ENST00000603731 UBR3Q6ZT12 1888 aa15.69■□□□□ 0.1
HERPUD2-207ENST00000603731 GRIN3BO60391 1043 aa15.68■□□□□ 0.1
HERPUD2-207ENST00000603731 RFC4P35249 363 aa15.68■□□□□ 0.1
HERPUD2-207ENST00000603731 ZNF827Q17R98 1081 aa15.68■□□□□ 0.1
HERPUD2-207ENST00000603731 EPHA10Q5JZY3 1008 aa15.68■□□□□ 0.1
HERPUD2-207ENST00000603731 LRRCC1Q9C099 1032 aa15.68■□□□□ 0.1
HERPUD2-207ENST00000603731 BCL11AQ9H165 835 aa15.68■□□□□ 0.1
HERPUD2-207ENST00000603731 NIP7Q9Y221 180 aaKnown RBP eCLIP15.68■□□□□ 0.1
HERPUD2-207ENST00000603731 C4AP0C0L4 1744 aa15.68■□□□□ 0.1
HERPUD2-207ENST00000603731 CDHR2Q9BYE9 1310 aa15.68■□□□□ 0.1
HERPUD2-207ENST00000603731 PHF14O94880 888 aa15.67■□□□□ 0.1
HERPUD2-207ENST00000603731 ADRA2BP18089 450 aa15.67■□□□□ 0.1
HERPUD2-207ENST00000603731 PDE4AP27815 886 aa15.67■□□□□ 0.1
HERPUD2-207ENST00000603731 RABL6Q3YEC7 729 aaPredicted RBP15.67■□□□□ 0.1
HERPUD2-207ENST00000603731 LMBR1LQ6UX01 489 aa15.67■□□□□ 0.1
HERPUD2-207ENST00000603731 DNAJC5GQ8N7S2 189 aa15.67■□□□□ 0.1
HERPUD2-207ENST00000603731 ARHGEF1Q92888 912 aaKnown RBP15.67■□□□□ 0.1
HERPUD2-207ENST00000603731 FAM89AQ96GI7 184 aa15.67■□□□□ 0.1
HERPUD2-207ENST00000603731 UTP14AQ9BVJ6 771 aaKnown RBP15.67■□□□□ 0.1
HERPUD2-207ENST00000603731 HSP90B1P14625 803 aaKnown RBP15.66■□□□□ 0.1
HERPUD2-207ENST00000603731 PRELPP51888 382 aa15.66■□□□□ 0.1
HERPUD2-207ENST00000603731 FOXO4P98177 505 aa15.66■□□□□ 0.1
HERPUD2-207ENST00000603731 G3BP1Q13283 466 aaKnown RBP eCLIP15.66■□□□□ 0.1
HERPUD2-207ENST00000603731 USPL1Q5W0Q7 1092 aa15.66■□□□□ 0.1
HERPUD2-207ENST00000603731 SMIM5Q71RC9 77 aa15.66■□□□□ 0.1
HERPUD2-207ENST00000603731 ERC1Q8IUD2 1116 aa15.66■□□□□ 0.1
HERPUD2-207ENST00000603731 PLA2G12BQ9BX93 195 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms