RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 GRIPAP1Q4V328 841 aa30.58■■■□□ 2.49
SSX2IP-209ENST00000603677 C9orf131Q5VYM1 1079 aa30.58■■■□□ 2.49
SSX2IP-209ENST00000603677 NUTM1Q86Y26 1132 aa30.58■■■□□ 2.49
SSX2IP-209ENST00000603677 TSR2Q969E8 191 aaKnown RBP30.58■■■□□ 2.49
SSX2IP-209ENST00000603677 NLRP3Q96P20 1036 aa30.58■■■□□ 2.49
SSX2IP-209ENST00000603677 STK31Q9BXU1 1019 aa30.58■■■□□ 2.49
SSX2IP-209ENST00000603677 GPBP1L1Q9HC44 474 aaPredicted RBP30.58■■■□□ 2.49
SSX2IP-209ENST00000603677 CACNA1FO60840 1977 aa30.57■■■□□ 2.48
SSX2IP-209ENST00000603677 MYH16Q9H6N6 1097 aa30.57■■■□□ 2.48
SSX2IP-209ENST00000603677 C21orf2O43822 256 aa30.56■■■□□ 2.48
SSX2IP-209ENST00000603677 ISCA1Q9BUE6 129 aa30.56■■■□□ 2.48
SSX2IP-209ENST00000603677 FER1L6Q2WGJ9 1857 aa30.56■■■□□ 2.48
SSX2IP-209ENST00000603677 SLX4Q8IY92 1834 aa30.56■■■□□ 2.48
SSX2IP-209ENST00000603677 ABCC12Q96J65 1359 aa30.55■■■□□ 2.48
SSX2IP-209ENST00000603677 CC2D2BQ6DHV5 1058 aa30.55■■■□□ 2.48
SSX2IP-209ENST00000603677 TSPYL6Q8N831 410 aa30.55■■■□□ 2.48
SSX2IP-209ENST00000603677 C7orf43Q8WVR3 580 aa30.55■■■□□ 2.48
SSX2IP-209ENST00000603677 CRAMP1Q96RY5 1269 aa30.55■■■□□ 2.48
SSX2IP-209ENST00000603677 SH3TC1Q8TE82 1336 aa30.54■■■□□ 2.48
SSX2IP-209ENST00000603677 FANCIQ9NVI1 1328 aa30.54■■■□□ 2.48
SSX2IP-209ENST00000603677 RIC3Q7Z5B4 369 aa30.54■■■□□ 2.48
SSX2IP-209ENST00000603677 RPGRQ92834 1020 aaKnown RBP30.54■■■□□ 2.48
SSX2IP-209ENST00000603677 RNF181Q9P0P0 153 aa30.54■■■□□ 2.48
SSX2IP-209ENST00000603677 HSP90B1P14625 803 aaKnown RBP30.53■■■□□ 2.48
SSX2IP-209ENST00000603677 RBM17Q96I25 401 aaKnown RBP30.53■■■□□ 2.48
SSX2IP-209ENST00000603677 TRMT112Q9UI30 125 aaKnown RBP30.53■■■□□ 2.48
SSX2IP-209ENST00000603677 NFKBIEO00221 500 aa30.52■■■□□ 2.48
SSX2IP-209ENST00000603677 CCDC93Q567U6 631 aa30.52■■■□□ 2.48
SSX2IP-209ENST00000603677 RTKN2Q8IZC4 609 aa30.52■■■□□ 2.48
SSX2IP-209ENST00000603677 PHAXQ9H814 394 aaKnown RBP30.51■■■□□ 2.47
SSX2IP-209ENST00000603677 SALL2Q9Y467 1007 aaPredicted RBP30.51■■■□□ 2.47
SSX2IP-209ENST00000603677 TNRC6CQ9HCJ0 1690 aaKnown RBP30.5■■■□□ 2.47
SSX2IP-209ENST00000603677 TAOK3Q9H2K8 898 aa30.5■■■□□ 2.47
SSX2IP-209ENST00000603677 CACNA1SQ13698 1873 aa30.5■■■□□ 2.47
SSX2IP-209ENST00000603677 ZNF521Q96K83 1311 aa30.49■■■□□ 2.47
SSX2IP-209ENST00000603677 KDM2BQ8NHM5 1336 aa30.48■■■□□ 2.47
SSX2IP-209ENST00000603677 CCDC191Q8NCU4 936 aa30.48■■■□□ 2.47
SSX2IP-209ENST00000603677 VAMP4O75379 141 aa30.47■■■□□ 2.47
SSX2IP-209ENST00000603677 DICER1Q9UPY3 1922 aaKnown RBP30.47■■■□□ 2.47
SSX2IP-209ENST00000603677 RASSF7Q02833 373 aa30.46■■■□□ 2.47
SSX2IP-209ENST00000603677 KSR2Q6VAB6 950 aa30.46■■■□□ 2.47
SSX2IP-209ENST00000603677 METTL22Q9BUU2 404 aaPredicted RBP30.46■■■□□ 2.47
SSX2IP-209ENST00000603677 CCDC88AQ3V6T2 1871 aa30.46■■■□□ 2.47
SSX2IP-209ENST00000603677 SLC4A2P04920 1241 aa30.45■■■□□ 2.47
SSX2IP-209ENST00000603677 FKBP4Q02790 459 aaKnown RBP eCLIP30.44■■■□□ 2.46
SSX2IP-209ENST00000603677 ZBTB38Q8NAP3 1195 aaPredicted RBP30.44■■■□□ 2.46
SSX2IP-209ENST00000603677 TMX4Q9H1E5 349 aaPredicted RBP30.44■■■□□ 2.46
SSX2IP-209ENST00000603677 SENP3-EIF4A1A0A087X0R7 540 aa30.43■■■□□ 2.46
SSX2IP-209ENST00000603677 BBOX1O75936 387 aa30.43■■■□□ 2.46
SSX2IP-209ENST00000603677 EXOSC9Q06265 439 aaKnown RBP30.43■■■□□ 2.46
SSX2IP-209ENST00000603677 TMC4Q7Z404 712 aa30.43■■■□□ 2.46
SSX2IP-209ENST00000603677 PSMD1Q99460 953 aa30.43■■■□□ 2.46
SSX2IP-209ENST00000603677 ZNF219Q9P2Y4 722 aaPredicted RBP30.43■■■□□ 2.46
SSX2IP-209ENST00000603677 ATP5J2-PTCD1G3V325 749 aa30.42■■■□□ 2.46
SSX2IP-209ENST00000603677 C1QTNF8P60827 252 aa30.42■■■□□ 2.46
SSX2IP-209ENST00000603677 NEXNQ0ZGT2 675 aa30.42■■■□□ 2.46
SSX2IP-209ENST00000603677 SF3B3Q15393 1217 aaKnown RBP30.41■■■□□ 2.46
SSX2IP-209ENST00000603677 DPY19L2Q6NUT2 758 aa30.41■■■□□ 2.46
SSX2IP-209ENST00000603677 E9PSI1 815 aa30.4■■■□□ 2.46
SSX2IP-209ENST00000603677 PRELPP51888 382 aa30.4■■■□□ 2.46
SSX2IP-209ENST00000603677 DDX46Q7L014 1031 aaKnown RBP30.4■■■□□ 2.46
SSX2IP-209ENST00000603677 ZNF526Q8TF50 670 aaPredicted RBP30.4■■■□□ 2.46
SSX2IP-209ENST00000603677 SPINK5Q9NQ38 1064 aaPredicted RBP30.4■■■□□ 2.46
SSX2IP-209ENST00000603677 PI4KAP2A4QPH2 592 aa30.39■■■□□ 2.46
SSX2IP-209ENST00000603677 GLTPD2A6NH11 291 aa30.39■■■□□ 2.46
SSX2IP-209ENST00000603677 PI4KAP1Q8N8J0 262 aa30.39■■■□□ 2.46
SSX2IP-209ENST00000603677 MYD88Q99836 296 aa30.39■■■□□ 2.46
SSX2IP-209ENST00000603677 VPS33BQ9H267 617 aa30.39■■■□□ 2.46
SSX2IP-209ENST00000603677 CWC25Q9NXE8 425 aaPredicted RBP30.39■■■□□ 2.46
SSX2IP-209ENST00000603677 MAP3K2Q9Y2U5 619 aa30.39■■■□□ 2.46
SSX2IP-209ENST00000603677 PCCAP05165 728 aaPredicted RBP30.38■■■□□ 2.45
SSX2IP-209ENST00000603677 HCLS1P14317 486 aaPredicted RBP30.38■■■□□ 2.45
SSX2IP-209ENST00000603677 FAM89AQ96GI7 184 aa30.38■■■□□ 2.45
SSX2IP-209ENST00000603677 LAMB2P55268 1798 aa30.38■■■□□ 2.45
SSX2IP-209ENST00000603677 SNED1Q8TER0 1413 aa30.38■■■□□ 2.45
SSX2IP-209ENST00000603677 PPEF1O14829 653 aaPredicted RBP30.37■■■□□ 2.45
SSX2IP-209ENST00000603677 FLIIQ13045 1269 aa30.37■■■□□ 2.45
SSX2IP-209ENST00000603677 C3orf67Q6ZVT6 689 aa30.37■■■□□ 2.45
SSX2IP-209ENST00000603677 ZNF428Q96B54 188 aa30.37■■■□□ 2.45
SSX2IP-209ENST00000603677 ATP6V0A2Q9Y487 856 aa30.37■■■□□ 2.45
SSX2IP-209ENST00000603677 TIAM2Q8IVF5 1701 aa30.36■■■□□ 2.45
SSX2IP-209ENST00000603677 IRS4O14654 1257 aaPredicted RBP30.36■■■□□ 2.45
SSX2IP-209ENST00000603677 KIF3CO14782 793 aa30.36■■■□□ 2.45
SSX2IP-209ENST00000603677 DIEXFQ68CQ4 756 aaKnown RBP30.36■■■□□ 2.45
SSX2IP-209ENST00000603677 DDX60Q8IY21 1712 aaKnown RBP30.36■■■□□ 2.45
SSX2IP-209ENST00000603677 GRAPQ13588 217 aa30.35■■■□□ 2.45
SSX2IP-209ENST00000603677 SP8Q8IXZ3 490 aa30.35■■■□□ 2.45
SSX2IP-209ENST00000603677 GRAPLQ8TC17 118 aaPredicted RBP30.35■■■□□ 2.45
SSX2IP-209ENST00000603677 ABCC4O15439 1325 aa30.35■■■□□ 2.45
SSX2IP-209ENST00000603677 CDHR2Q9BYE9 1310 aa30.34■■■□□ 2.45
SSX2IP-209ENST00000603677 SYNE4Q8N205 404 aa30.34■■■□□ 2.45
SSX2IP-209ENST00000603677 TOMM70O94826 608 aa30.32■■■□□ 2.44
SSX2IP-209ENST00000603677 FKBP5Q13451 457 aaPredicted RBP30.32■■■□□ 2.44
SSX2IP-209ENST00000603677 PDE8AO60658 829 aa30.31■■■□□ 2.44
SSX2IP-209ENST00000603677 IARSP41252 1262 aaKnown RBP30.31■■■□□ 2.44
SSX2IP-209ENST00000603677 G2E3Q7L622 706 aa30.31■■■□□ 2.44
SSX2IP-209ENST00000603677 SUPT20HQ8NEM7 779 aa30.31■■■□□ 2.44
SSX2IP-209ENST00000603677 IGKV5-2P06315 115 aa30.3■■■□□ 2.44
SSX2IP-209ENST00000603677 SLFN5Q08AF3 891 aa30.3■■■□□ 2.44
SSX2IP-209ENST00000603677 DNAAF4Q8WXU2 420 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms