RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 CRY2Q49AN0 593 aa28.22■■■□□ 2.11
PPFIA3-208ENST00000602726 SOGA3Q5TF21 947 aa28.22■■■□□ 2.11
PPFIA3-208ENST00000602726 ANKRD36CQ5JPF3 1778 aa28.22■■■□□ 2.11
PPFIA3-208ENST00000602726 RNF123Q5XPI4 1314 aa28.21■■■□□ 2.11
PPFIA3-208ENST00000602726 SBF1O95248 1867 aa28.21■■■□□ 2.11
PPFIA3-208ENST00000602726 RIC1Q4ADV7 1423 aa28.21■■■□□ 2.11
PPFIA3-208ENST00000602726 NFKBIEO00221 500 aa28.21■■■□□ 2.11
PPFIA3-208ENST00000602726 RPGRQ92834 1020 aaKnown RBP28.21■■■□□ 2.11
PPFIA3-208ENST00000602726 PHAXQ9H814 394 aaKnown RBP28.21■■■□□ 2.11
PPFIA3-208ENST00000602726 TNRC6CQ9HCJ0 1690 aaKnown RBP28.21■■■□□ 2.11
PPFIA3-208ENST00000602726 TWISTNBQ3B726 338 aaPredicted RBP28.2■■■□□ 2.1
PPFIA3-208ENST00000602726 RIC3Q7Z5B4 369 aa28.2■■■□□ 2.1
PPFIA3-208ENST00000602726 TRMT112Q9UI30 125 aaKnown RBP28.2■■■□□ 2.1
PPFIA3-208ENST00000602726 FANCIQ9NVI1 1328 aa28.19■■■□□ 2.1
PPFIA3-208ENST00000602726 ARFGEF2Q9Y6D5 1785 aa28.19■■■□□ 2.1
PPFIA3-208ENST00000602726 SLC10A5Q5PT55 438 aa28.19■■■□□ 2.1
PPFIA3-208ENST00000602726 NLRP3Q96P20 1036 aa28.19■■■□□ 2.1
PPFIA3-208ENST00000602726 C7orf43Q8WVR3 580 aa28.18■■■□□ 2.1
PPFIA3-208ENST00000602726 STK31Q9BXU1 1019 aa28.18■■■□□ 2.1
PPFIA3-208ENST00000602726 ISCA1Q9BUE6 129 aa28.17■■■□□ 2.1
PPFIA3-208ENST00000602726 TAOK3Q9H2K8 898 aa28.17■■■□□ 2.1
PPFIA3-208ENST00000602726 ATP5J2-PTCD1G3V325 749 aa28.16■■■□□ 2.1
PPFIA3-208ENST00000602726 HOXA10P31260 410 aaPredicted RBP28.16■■■□□ 2.1
PPFIA3-208ENST00000602726 PRELPP51888 382 aa28.16■■■□□ 2.1
PPFIA3-208ENST00000602726 CCDC93Q567U6 631 aa28.16■■■□□ 2.1
PPFIA3-208ENST00000602726 RBM17Q96I25 401 aaKnown RBP28.16■■■□□ 2.1
PPFIA3-208ENST00000602726 SH3TC1Q8TE82 1336 aa28.16■■■□□ 2.1
PPFIA3-208ENST00000602726 TCERG1O14776 1098 aaKnown RBP28.15■■■□□ 2.1
PPFIA3-208ENST00000602726 DDX58O95786 925 aaKnown RBP28.15■■■□□ 2.1
PPFIA3-208ENST00000602726 C3orf67Q6ZVT6 689 aa28.15■■■□□ 2.1
PPFIA3-208ENST00000602726 ZNF428Q96B54 188 aa28.15■■■□□ 2.1
PPFIA3-208ENST00000602726 LTBP3Q9NS15 1303 aa28.15■■■□□ 2.1
PPFIA3-208ENST00000602726 FER1L6Q2WGJ9 1857 aa28.15■■■□□ 2.1
PPFIA3-208ENST00000602726 HCLS1P14317 486 aaPredicted RBP28.14■■■□□ 2.1
PPFIA3-208ENST00000602726 C1QTNF8P60827 252 aa28.14■■■□□ 2.1
PPFIA3-208ENST00000602726 MYH16Q9H6N6 1097 aa28.14■■■□□ 2.1
PPFIA3-208ENST00000602726 ZC3H4Q9UPT8 1303 aaKnown RBP28.14■■■□□ 2.09
PPFIA3-208ENST00000602726 SYNE4Q8N205 404 aa28.13■■■□□ 2.09
PPFIA3-208ENST00000602726 CRAMP1Q96RY5 1269 aa28.13■■■□□ 2.09
PPFIA3-208ENST00000602726 CCDC88AQ3V6T2 1871 aa28.12■■■□□ 2.09
PPFIA3-208ENST00000602726 CCER2I3L3R5 266 aa28.12■■■□□ 2.09
PPFIA3-208ENST00000602726 TRIM28Q13263 835 aaKnown RBP28.12■■■□□ 2.09
PPFIA3-208ENST00000602726 SPINK5Q9NQ38 1064 aaPredicted RBP28.12■■■□□ 2.09
PPFIA3-208ENST00000602726 EXOSC9Q06265 439 aaKnown RBP28.11■■■□□ 2.09
PPFIA3-208ENST00000602726 OLFM4Q6UX06 510 aa28.11■■■□□ 2.09
PPFIA3-208ENST00000602726 RTKN2Q8IZC4 609 aa28.11■■■□□ 2.09
PPFIA3-208ENST00000602726 MYD88Q99836 296 aa28.11■■■□□ 2.09
PPFIA3-208ENST00000602726 KDM2BQ8NHM5 1336 aa28.11■■■□□ 2.09
PPFIA3-208ENST00000602726 SLC4A2P04920 1241 aa28.1■■■□□ 2.09
PPFIA3-208ENST00000602726 FAM89AQ96GI7 184 aa28.1■■■□□ 2.09
PPFIA3-208ENST00000602726 VAMP4O75379 141 aa28.08■■■□□ 2.09
PPFIA3-208ENST00000602726 FKBP4Q02790 459 aaKnown RBP eCLIP28.08■■■□□ 2.09
PPFIA3-208ENST00000602726 CC2D2BQ6DHV5 1058 aa28.08■■■□□ 2.09
PPFIA3-208ENST00000602726 KSR2Q6VAB6 950 aa28.08■■■□□ 2.09
PPFIA3-208ENST00000602726 METTL22Q9BUU2 404 aaPredicted RBP28.08■■■□□ 2.09
PPFIA3-208ENST00000602726 NMRK2Q9NPI5 230 aa28.08■■■□□ 2.09
PPFIA3-208ENST00000602726 KIF3CO14782 793 aa28.07■■■□□ 2.08
PPFIA3-208ENST00000602726 PPEF1O14829 653 aaPredicted RBP28.07■■■□□ 2.08
PPFIA3-208ENST00000602726 MAP3K2Q9Y2U5 619 aa28.07■■■□□ 2.08
PPFIA3-208ENST00000602726 PI4KAP2A4QPH2 592 aa28.06■■■□□ 2.08
PPFIA3-208ENST00000602726 RTL5Q5HYW3 569 aaPredicted RBP28.06■■■□□ 2.08
PPFIA3-208ENST00000602726 PI4KAP1Q8N8J0 262 aa28.06■■■□□ 2.08
PPFIA3-208ENST00000602726 ZNF521Q96K83 1311 aa28.06■■■□□ 2.08
PPFIA3-208ENST00000602726 DDX46Q7L014 1031 aaKnown RBP28.05■■■□□ 2.08
PPFIA3-208ENST00000602726 G2E3Q7L622 706 aa28.05■■■□□ 2.08
PPFIA3-208ENST00000602726 CCDC191Q8NCU4 936 aa28.05■■■□□ 2.08
PPFIA3-208ENST00000602726 TMX4Q9H1E5 349 aaPredicted RBP28.05■■■□□ 2.08
PPFIA3-208ENST00000602726 TIAM2Q8IVF5 1701 aa28.04■■■□□ 2.08
PPFIA3-208ENST00000602726 ABCC4O15439 1325 aa28.04■■■□□ 2.08
PPFIA3-208ENST00000602726 GLTPD2A6NH11 291 aa28.04■■■□□ 2.08
PPFIA3-208ENST00000602726 ZBTB38Q8NAP3 1195 aaPredicted RBP28.04■■■□□ 2.08
PPFIA3-208ENST00000602726 ZNF277Q9NRM2 450 aaPredicted RBP28.04■■■□□ 2.08
PPFIA3-208ENST00000602726 CWC25Q9NXE8 425 aaPredicted RBP28.04■■■□□ 2.08
PPFIA3-208ENST00000602726 DICER1Q9UPY3 1922 aaKnown RBP28.04■■■□□ 2.08
PPFIA3-208ENST00000602726 IRS4O14654 1257 aaPredicted RBP28.03■■■□□ 2.08
PPFIA3-208ENST00000602726 GRIPAP1Q4V328 841 aa28.03■■■□□ 2.08
PPFIA3-208ENST00000602726 LAMB2P55268 1798 aa28.03■■■□□ 2.08
PPFIA3-208ENST00000602726 BBOX1O75936 387 aa28.02■■■□□ 2.08
PPFIA3-208ENST00000602726 NEXNQ0ZGT2 675 aa28.02■■■□□ 2.08
PPFIA3-208ENST00000602726 FLIIQ13045 1269 aa28.02■■■□□ 2.08
PPFIA3-208ENST00000602726 DPY19L2Q6NUT2 758 aa28.02■■■□□ 2.08
PPFIA3-208ENST00000602726 RRAGCQ9HB90 399 aa28.02■■■□□ 2.08
PPFIA3-208ENST00000602726 HSP90B1P14625 803 aaKnown RBP28.01■■■□□ 2.07
PPFIA3-208ENST00000602726 PSMD1Q99460 953 aa28.01■■■□□ 2.07
PPFIA3-208ENST00000602726 C16orf71Q8IYS4 520 aaPredicted RBP28■■■□□ 2.07
PPFIA3-208ENST00000602726 ATP6V0A2Q9Y487 856 aa28■■■□□ 2.07
PPFIA3-208ENST00000602726 CACNA1FO60840 1977 aa28■■■□□ 2.07
PPFIA3-208ENST00000602726 DDX60Q8IY21 1712 aaKnown RBP28■■■□□ 2.07
PPFIA3-208ENST00000602726 PCCAP05165 728 aaPredicted RBP27.99■■■□□ 2.07
PPFIA3-208ENST00000602726 FKBP5Q13451 457 aaPredicted RBP27.99■■■□□ 2.07
PPFIA3-208ENST00000602726 GRAPQ13588 217 aa27.99■■■□□ 2.07
PPFIA3-208ENST00000602726 SF3B3Q15393 1217 aaKnown RBP27.99■■■□□ 2.07
PPFIA3-208ENST00000602726 DIEXFQ68CQ4 756 aaKnown RBP27.99■■■□□ 2.07
PPFIA3-208ENST00000602726 GRAPLQ8TC17 118 aaPredicted RBP27.99■■■□□ 2.07
PPFIA3-208ENST00000602726 IARSP41252 1262 aaKnown RBP27.98■■■□□ 2.07
PPFIA3-208ENST00000602726 SNED1Q8TER0 1413 aa27.98■■■□□ 2.07
PPFIA3-208ENST00000602726 E9PSI1 815 aa27.97■■■□□ 2.07
PPFIA3-208ENST00000602726 TOMM70O94826 608 aa27.97■■■□□ 2.07
PPFIA3-208ENST00000602726 IGKV5-2P06315 115 aa27.97■■■□□ 2.07
PPFIA3-208ENST00000602726 SLC51AQ86UW1 340 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms