RNA–Protein interactions for RNA: ENST00000602591.1

HCG18-246, Transcript of HLA complex group 18, humanhuman

Gene HCG18, Length 1,976 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-246ENST00000602591 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.85□□□□□ -0.03
HCG18-246ENST00000602591 GNAI3P08754 354 aa14.85□□□□□ -0.03
HCG18-246ENST00000602591 AAMPQ13685 434 aa14.85□□□□□ -0.03
HCG18-246ENST00000602591 NLRP10Q86W26 655 aa14.85□□□□□ -0.03
HCG18-246ENST00000602591 ZNF34Q8IZ26 560 aa14.85□□□□□ -0.03
HCG18-246ENST00000602591 AKT1S1Q96B36 256 aa14.85□□□□□ -0.03
HCG18-246ENST00000602591 ANKRD44Q8N8A2 993 aa14.84□□□□□ -0.03
HCG18-246ENST00000602591 H7C1W4 665 aa14.84□□□□□ -0.03
HCG18-246ENST00000602591 HDAC1Q13547 482 aaPredicted RBP14.84□□□□□ -0.03
HCG18-246ENST00000602591 FAM89AQ96GI7 184 aa14.84□□□□□ -0.03
HCG18-246ENST00000602591 CWC25Q9NXE8 425 aaPredicted RBP14.84□□□□□ -0.03
HCG18-246ENST00000602591 FAM177BA6PVY3 158 aa14.83□□□□□ -0.04
HCG18-246ENST00000602591 TRIM28Q13263 835 aaKnown RBP14.83□□□□□ -0.04
HCG18-246ENST00000602591 CCDC191Q8NCU4 936 aa14.83□□□□□ -0.04
HCG18-246ENST00000602591 BICC1Q9H694 974 aaKnown RBP14.83□□□□□ -0.04
HCG18-246ENST00000602591 NARFQ9UHQ1 456 aa14.83□□□□□ -0.04
HCG18-246ENST00000602591 SUSD4Q5VX71 490 aa14.82□□□□□ -0.04
HCG18-246ENST00000602591 TBC1D9BQ66K14 1250 aa14.82□□□□□ -0.04
HCG18-246ENST00000602591 IBTKQ9P2D0 1353 aaPredicted RBP14.82□□□□□ -0.04
HCG18-246ENST00000602591 TRAPPC3LQ5T215 181 aa14.82□□□□□ -0.04
HCG18-246ENST00000602591 BICDL1Q6ZP65 573 aa14.82□□□□□ -0.04
HCG18-246ENST00000602591 NPM2Q86SE8 214 aaKnown RBP14.82□□□□□ -0.04
HCG18-246ENST00000602591 USP42Q9H9J4 1324 aaKnown RBP14.82□□□□□ -0.04
HCG18-246ENST00000602591 PPP1R42Q7Z4L9 355 aa14.81□□□□□ -0.04
HCG18-246ENST00000602591 FOXO4P98177 505 aa14.8□□□□□ -0.04
HCG18-246ENST00000602591 ATP8B2P98198 1209 aa14.8□□□□□ -0.04
HCG18-246ENST00000602591 CENPQQ7L2Z9 268 aaPredicted RBP14.8□□□□□ -0.04
HCG18-246ENST00000602591 COL23A1Q86Y22 540 aaPredicted RBP14.8□□□□□ -0.04
HCG18-246ENST00000602591 CHMP4BQ9H444 224 aaKnown RBP14.8□□□□□ -0.04
HCG18-246ENST00000602591 NIP7Q9Y221 180 aaKnown RBP eCLIP14.8□□□□□ -0.04
HCG18-246ENST00000602591 PDGFDQ9GZP0 370 aaPredicted RBP14.8□□□□□ -0.04
HCG18-246ENST00000602591 RWDD1Q9H446 243 aaPredicted RBP14.8□□□□□ -0.04
HCG18-246ENST00000602591 RFC4P35249 363 aa14.79□□□□□ -0.04
HCG18-246ENST00000602591 NUTM1Q86Y26 1132 aa14.79□□□□□ -0.04
HCG18-246ENST00000602591 RPAP2Q8IXW5 612 aaPredicted RBP14.79□□□□□ -0.04
HCG18-246ENST00000602591 SMC5Q8IY18 1101 aa14.79□□□□□ -0.04
HCG18-246ENST00000602591 KLHDC4Q8TBB5 520 aa14.79□□□□□ -0.04
HCG18-246ENST00000602591 TFCP2L1Q9NZI6 479 aa14.79□□□□□ -0.04
HCG18-246ENST00000602591 COL24A1Q17RW2 1714 aa14.79□□□□□ -0.04
HCG18-246ENST00000602591 DDX60Q8IY21 1712 aaKnown RBP14.79□□□□□ -0.04
HCG18-246ENST00000602591 PNPLA7Q6ZV29 1317 aa14.78□□□□□ -0.04
HCG18-246ENST00000602591 NTSR2O95665 410 aa14.78□□□□□ -0.04
HCG18-246ENST00000602591 GYS1P13807 737 aa14.78□□□□□ -0.04
HCG18-246ENST00000602591 SSFA2P28290 1259 aa14.78□□□□□ -0.04
HCG18-246ENST00000602591 POLA2Q14181 598 aa14.78□□□□□ -0.04
HCG18-246ENST00000602591 HSP90AB3PQ58FF7 597 aa14.78□□□□□ -0.04
HCG18-246ENST00000602591 CCDC24Q8N4L8 307 aa14.78□□□□□ -0.04
HCG18-246ENST00000602591 SRGAP3O43295 1099 aa14.78□□□□□ -0.04
HCG18-246ENST00000602591 ZPR1O75312 459 aa14.78□□□□□ -0.04
HCG18-246ENST00000602591 PCCAP05165 728 aaPredicted RBP14.78□□□□□ -0.04
HCG18-246ENST00000602591 ZBTB38Q8NAP3 1195 aaPredicted RBP14.78□□□□□ -0.04
HCG18-246ENST00000602591 SSH3Q8TE77 659 aa14.78□□□□□ -0.04
HCG18-246ENST00000602591 TRMT112Q9UI30 125 aaKnown RBP14.78□□□□□ -0.04
HCG18-246ENST00000602591 PA2G4Q9UQ80 394 aaKnown RBP14.78□□□□□ -0.04
HCG18-246ENST00000602591 COL4A1P02462 1669 aa14.78□□□□□ -0.04
HCG18-246ENST00000602591 CASZ1Q86V15 1759 aa14.77□□□□□ -0.04
HCG18-246ENST00000602591 MTX1Q13505 466 aa14.77□□□□□ -0.04
HCG18-246ENST00000602591 CLEC4GQ6UXB4 293 aa14.77□□□□□ -0.04
HCG18-246ENST00000602591 CCDC85AQ96PX6 553 aaPredicted RBP14.77□□□□□ -0.04
HCG18-246ENST00000602591 PDZRN3Q9UPQ7 1066 aa14.77□□□□□ -0.04
HCG18-246ENST00000602591 EXOC6BQ9Y2D4 811 aa14.77□□□□□ -0.04
HCG18-246ENST00000602591 APBB1O00213 710 aa14.76□□□□□ -0.05
HCG18-246ENST00000602591 HCLS1P14317 486 aaPredicted RBP14.76□□□□□ -0.05
HCG18-246ENST00000602591 ADRA2BP18089 450 aa14.76□□□□□ -0.05
HCG18-246ENST00000602591 BAG6P46379 1132 aa14.76□□□□□ -0.05
HCG18-246ENST00000602591 NFIXQ14938 502 aa14.76□□□□□ -0.05
HCG18-246ENST00000602591 RABL6Q3YEC7 729 aaPredicted RBP14.76□□□□□ -0.05
HCG18-246ENST00000602591 LMBR1LQ6UX01 489 aa14.76□□□□□ -0.05
HCG18-246ENST00000602591 C3orf67Q6ZVT6 689 aa14.76□□□□□ -0.05
HCG18-246ENST00000602591 ILDR2Q71H61 639 aa14.76□□□□□ -0.05
HCG18-246ENST00000602591 DCTPP1Q9H773 170 aa14.76□□□□□ -0.05
HCG18-246ENST00000602591 TSHZ2Q9NRE2 1034 aa14.76□□□□□ -0.05
HCG18-246ENST00000602591 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.76□□□□□ -0.05
HCG18-246ENST00000602591 ABCC12Q96J65 1359 aa14.76□□□□□ -0.05
HCG18-246ENST00000602591 SMARCA5O60264 1052 aaPredicted RBP14.75□□□□□ -0.05
HCG18-246ENST00000602591 PDE4AP27815 886 aa14.75□□□□□ -0.05
HCG18-246ENST00000602591 RFX5P48382 616 aaPredicted RBP14.75□□□□□ -0.05
HCG18-246ENST00000602591 SF3B2Q13435 895 aaKnown RBP14.75□□□□□ -0.05
HCG18-246ENST00000602591 SLC15A2Q16348 729 aa14.75□□□□□ -0.05
HCG18-246ENST00000602591 ERFEQ4G0M1 354 aa14.75□□□□□ -0.05
HCG18-246ENST00000602591 ZNF652Q9Y2D9 606 aa14.75□□□□□ -0.05
HCG18-246ENST00000602591 GOLGB1Q14789 3259 aaKnown RBP14.75□□□□□ -0.05
HCG18-246ENST00000602591 MYH3P11055 1940 aa14.75□□□□□ -0.05
HCG18-246ENST00000602591 IRS4O14654 1257 aaPredicted RBP14.74□□□□□ -0.05
HCG18-246ENST00000602591 DDR1Q08345 913 aa14.74□□□□□ -0.05
HCG18-246ENST00000602591 UPF1Q92900 1129 aaKnown RBP eCLIP14.74□□□□□ -0.05
HCG18-246ENST00000602591 UTP14AQ9BVJ6 771 aaKnown RBP14.74□□□□□ -0.05
HCG18-246ENST00000602591 TNRC6CQ9HCJ0 1690 aaKnown RBP14.74□□□□□ -0.05
HCG18-246ENST00000602591 TAF1P21675 1872 aa14.74□□□□□ -0.05
HCG18-246ENST00000602591 CDHR2Q9BYE9 1310 aa14.74□□□□□ -0.05
HCG18-246ENST00000602591 LAMB2P55268 1798 aa14.73□□□□□ -0.05
HCG18-246ENST00000602591 FAM161AQ3B820 660 aa14.73□□□□□ -0.05
HCG18-246ENST00000602591 PARP10Q53GL7 1025 aa14.73□□□□□ -0.05
HCG18-246ENST00000602591 MSL1Q68DK7 614 aa14.73□□□□□ -0.05
HCG18-246ENST00000602591 LNPKQ9C0E8 428 aa14.73□□□□□ -0.05
HCG18-246ENST00000602591 SH3TC1Q8TE82 1336 aa14.73□□□□□ -0.05
HCG18-246ENST00000602591 NUCB1Q02818 461 aa14.73□□□□□ -0.05
HCG18-246ENST00000602591 C16orf71Q8IYS4 520 aaPredicted RBP14.73□□□□□ -0.05
HCG18-246ENST00000602591 OTUD7AQ8TE49 926 aaPredicted RBP14.73□□□□□ -0.05
HCG18-246ENST00000602591 ZNF594Q96JF6 807 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms