RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 SLC10A5Q5PT55 438 aa22.62■■□□□ 1.21
IRF3-230ENST00000601809 CNKSR1Q969H4 720 aa22.62■■□□□ 1.21
IRF3-230ENST00000601809 RNF123Q5XPI4 1314 aa22.61■■□□□ 1.21
IRF3-230ENST00000601809 TWISTNBQ3B726 338 aaPredicted RBP22.61■■□□□ 1.21
IRF3-230ENST00000601809 CCDC30Q5VVM6 783 aa22.61■■□□□ 1.21
IRF3-230ENST00000601809 PRPF40BQ6NWY9 871 aaKnown RBP22.61■■□□□ 1.21
IRF3-230ENST00000601809 C3orf67Q6ZVT6 689 aa22.61■■□□□ 1.21
IRF3-230ENST00000601809 PPP1R42Q7Z4L9 355 aa22.61■■□□□ 1.21
IRF3-230ENST00000601809 DDX60Q8IY21 1712 aaKnown RBP22.61■■□□□ 1.21
IRF3-230ENST00000601809 SNED1Q8TER0 1413 aa22.61■■□□□ 1.21
IRF3-230ENST00000601809 RASSF7Q02833 373 aa22.6■■□□□ 1.21
IRF3-230ENST00000601809 CCDC88AQ3V6T2 1871 aa22.6■■□□□ 1.21
IRF3-230ENST00000601809 HOXA10P31260 410 aaPredicted RBP22.59■■□□□ 1.21
IRF3-230ENST00000601809 TRIM28Q13263 835 aaKnown RBP22.59■■□□□ 1.21
IRF3-230ENST00000601809 UTP14AQ9BVJ6 771 aaKnown RBP22.59■■□□□ 1.21
IRF3-230ENST00000601809 CACNA1FO60840 1977 aa22.59■■□□□ 1.21
IRF3-230ENST00000601809 C21orf2O43822 256 aa22.58■■□□□ 1.21
IRF3-230ENST00000601809 VAMP4O75379 141 aa22.58■■□□□ 1.21
IRF3-230ENST00000601809 GTF2E1P29083 439 aaPredicted RBP22.58■■□□□ 1.21
IRF3-230ENST00000601809 C9orf131Q5VYM1 1079 aa22.58■■□□□ 1.21
IRF3-230ENST00000601809 SYNE4Q8N205 404 aa22.58■■□□□ 1.21
IRF3-230ENST00000601809 CHMP4AQ9BY43 222 aa22.58■■□□□ 1.21
IRF3-230ENST00000601809 DICER1Q9UPY3 1922 aaKnown RBP22.57■■□□□ 1.2
IRF3-230ENST00000601809 EXOSC9Q06265 439 aaKnown RBP22.57■■□□□ 1.2
IRF3-230ENST00000601809 LTBP3Q9NS15 1303 aa22.57■■□□□ 1.2
IRF3-230ENST00000601809 TIAM2Q8IVF5 1701 aa22.56■■□□□ 1.2
IRF3-230ENST00000601809 G2E3Q7L622 706 aa22.55■■□□□ 1.2
IRF3-230ENST00000601809 ATP5J2-PTCD1G3V325 749 aa22.54■■□□□ 1.2
IRF3-230ENST00000601809 TCERG1O14776 1098 aaKnown RBP22.54■■□□□ 1.2
IRF3-230ENST00000601809 GOLGA2Q08379 1002 aa22.54■■□□□ 1.2
IRF3-230ENST00000601809 LMNB1P20700 586 aa22.53■■□□□ 1.2
IRF3-230ENST00000601809 ALDH1B1P30837 517 aa22.53■■□□□ 1.2
IRF3-230ENST00000601809 RNF181Q9P0P0 153 aa22.53■■□□□ 1.2
IRF3-230ENST00000601809 ZNF219Q9P2Y4 722 aaPredicted RBP22.53■■□□□ 1.2
IRF3-230ENST00000601809 TRMT112Q9UI30 125 aaKnown RBP22.53■■□□□ 1.2
IRF3-230ENST00000601809 SH3TC1Q8TE82 1336 aa22.53■■□□□ 1.2
IRF3-230ENST00000601809 OLFM4Q6UX06 510 aa22.52■■□□□ 1.2
IRF3-230ENST00000601809 RIC3Q7Z5B4 369 aa22.52■■□□□ 1.2
IRF3-230ENST00000601809 CRAMP1Q96RY5 1269 aa22.52■■□□□ 1.2
IRF3-230ENST00000601809 METTL22Q9BUU2 404 aaPredicted RBP22.52■■□□□ 1.2
IRF3-230ENST00000601809 MYH16Q9H6N6 1097 aa22.52■■□□□ 1.2
IRF3-230ENST00000601809 HCLS1P14317 486 aaPredicted RBP22.51■■□□□ 1.19
IRF3-230ENST00000601809 SLC51AQ86UW1 340 aa22.51■■□□□ 1.19
IRF3-230ENST00000601809 NLRP3Q96P20 1036 aa22.51■■□□□ 1.19
IRF3-230ENST00000601809 COL4A1P02462 1669 aa22.51■■□□□ 1.19
IRF3-230ENST00000601809 SLC4A2P04920 1241 aa22.5■■□□□ 1.19
IRF3-230ENST00000601809 SOGA3Q5TF21 947 aa22.5■■□□□ 1.19
IRF3-230ENST00000601809 DIEXFQ68CQ4 756 aaKnown RBP22.5■■□□□ 1.19
IRF3-230ENST00000601809 KSR2Q6VAB6 950 aa22.5■■□□□ 1.19
IRF3-230ENST00000601809 STK31Q9BXU1 1019 aa22.5■■□□□ 1.19
IRF3-230ENST00000601809 ZC3H4Q9UPT8 1303 aaKnown RBP22.5■■□□□ 1.19
IRF3-230ENST00000601809 TAF1P21675 1872 aa22.49■■□□□ 1.19
IRF3-230ENST00000601809 PI4KAP2A4QPH2 592 aa22.49■■□□□ 1.19
IRF3-230ENST00000601809 IGKV5-2P06315 115 aa22.49■■□□□ 1.19
IRF3-230ENST00000601809 CCDC93Q567U6 631 aa22.49■■□□□ 1.19
IRF3-230ENST00000601809 MIER1Q8N108 512 aa22.49■■□□□ 1.19
IRF3-230ENST00000601809 PI4KAP1Q8N8J0 262 aa22.49■■□□□ 1.19
IRF3-230ENST00000601809 ZNF428Q96B54 188 aa22.49■■□□□ 1.19
IRF3-230ENST00000601809 FAM89AQ96GI7 184 aa22.49■■□□□ 1.19
IRF3-230ENST00000601809 MYD88Q99836 296 aa22.49■■□□□ 1.19
IRF3-230ENST00000601809 MAP3K2Q9Y2U5 619 aa22.49■■□□□ 1.19
IRF3-230ENST00000601809 DDX58O95786 925 aaKnown RBP22.48■■□□□ 1.19
IRF3-230ENST00000601809 CCDC191Q8NCU4 936 aa22.48■■□□□ 1.19
IRF3-230ENST00000601809 RPGRQ92834 1020 aaKnown RBP22.48■■□□□ 1.19
IRF3-230ENST00000601809 TAOK3Q9H2K8 898 aa22.48■■□□□ 1.19
IRF3-230ENST00000601809 ABCC4O15439 1325 aa22.48■■□□□ 1.19
IRF3-230ENST00000601809 KIF3CO14782 793 aa22.47■■□□□ 1.19
IRF3-230ENST00000601809 SLFN5Q08AF3 891 aa22.47■■□□□ 1.19
IRF3-230ENST00000601809 FLIIQ13045 1269 aa22.47■■□□□ 1.19
IRF3-230ENST00000601809 TRMT2AQ8IZ69 625 aaKnown RBP22.47■■□□□ 1.19
IRF3-230ENST00000601809 RBM17Q96I25 401 aaKnown RBP22.47■■□□□ 1.19
IRF3-230ENST00000601809 GPBP1L1Q9HC44 474 aaPredicted RBP22.47■■□□□ 1.19
IRF3-230ENST00000601809 LRRC37AA6NMS7 1700 aa22.47■■□□□ 1.19
IRF3-230ENST00000601809 SF3B3Q15393 1217 aaKnown RBP22.46■■□□□ 1.19
IRF3-230ENST00000601809 ZBTB38Q8NAP3 1195 aaPredicted RBP22.46■■□□□ 1.19
IRF3-230ENST00000601809 ZNF526Q8TF50 670 aaPredicted RBP22.46■■□□□ 1.19
IRF3-230ENST00000601809 E9PSI1 815 aa22.45■■□□□ 1.18
IRF3-230ENST00000601809 PCCAP05165 728 aaPredicted RBP22.45■■□□□ 1.18
IRF3-230ENST00000601809 FKBP4Q02790 459 aaKnown RBP eCLIP22.45■■□□□ 1.18
IRF3-230ENST00000601809 COL4A5P29400 1685 aa22.44■■□□□ 1.18
IRF3-230ENST00000601809 IRS4O14654 1257 aaPredicted RBP22.43■■□□□ 1.18
IRF3-230ENST00000601809 PPEF1O14829 653 aaPredicted RBP22.43■■□□□ 1.18
IRF3-230ENST00000601809 CC2D2BQ6DHV5 1058 aa22.43■■□□□ 1.18
IRF3-230ENST00000601809 RTKN2Q8IZC4 609 aa22.43■■□□□ 1.18
IRF3-230ENST00000601809 CDCA7LQ96GN5 454 aa22.43■■□□□ 1.18
IRF3-230ENST00000601809 PSMD1Q99460 953 aa22.43■■□□□ 1.18
IRF3-230ENST00000601809 CWC25Q9NXE8 425 aaPredicted RBP22.43■■□□□ 1.18
IRF3-230ENST00000601809 NMRK2Q9NPI5 230 aa22.42■■□□□ 1.18
IRF3-230ENST00000601809 CDHR2Q9BYE9 1310 aa22.41■■□□□ 1.18
IRF3-230ENST00000601809 WDR90Q96KV7 1748 aa22.41■■□□□ 1.18
IRF3-230ENST00000601809 NEURL1BA8MQ27 555 aa22.41■■□□□ 1.18
IRF3-230ENST00000601809 C1QTNF8P60827 252 aa22.41■■□□□ 1.18
IRF3-230ENST00000601809 GRAPQ13588 217 aa22.41■■□□□ 1.18
IRF3-230ENST00000601809 CWF19L2Q2TBE0 894 aaKnown RBP22.41■■□□□ 1.18
IRF3-230ENST00000601809 RTL5Q5HYW3 569 aaPredicted RBP22.41■■□□□ 1.18
IRF3-230ENST00000601809 GRAPLQ8TC17 118 aaPredicted RBP22.41■■□□□ 1.18
IRF3-230ENST00000601809 ATP6V0A2Q9Y487 856 aa22.41■■□□□ 1.18
IRF3-230ENST00000601809 DUOX1Q9NRD9 1551 aa22.41■■□□□ 1.18
IRF3-230ENST00000601809 LTBP1Q14766 1721 aa22.4■■□□□ 1.18
IRF3-230ENST00000601809 GLTPD2A6NH11 291 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 159.8 ms