RNA–Protein interactions for RNA: ENST00000601607.5

LINC00343-209, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-209ENST00000601607 GPAMQ9HCL2 828 aa11.52□□□□□ -0.57
LINC00343-209ENST00000601607 CEP170BQ9Y4F5 1589 aaPredicted RBP11.51□□□□□ -0.57
LINC00343-209ENST00000601607 A0A1B0GTH6 734 aa11.51□□□□□ -0.57
LINC00343-209ENST00000601607 DKK1O94907 266 aa11.51□□□□□ -0.57
LINC00343-209ENST00000601607 F11P03951 625 aa11.51□□□□□ -0.57
LINC00343-209ENST00000601607 EPHA4P54764 986 aa11.51□□□□□ -0.57
LINC00343-209ENST00000601607 PTK7Q13308 1070 aa11.51□□□□□ -0.57
LINC00343-209ENST00000601607 ZNF385CQ66K41 422 aaPredicted RBP11.51□□□□□ -0.57
LINC00343-209ENST00000601607 TMEM151AQ8N4L1 468 aa11.51□□□□□ -0.57
LINC00343-209ENST00000601607 CPS1P31327 1500 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 KIF14Q15058 1648 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 MYO5CQ9NQX4 1742 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 FAM196BA6NMK8 535 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 USP17L15C9J2P7 530 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 USP17L10C9JJH3 530 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 USP17L13C9JLJ4 530 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 USP17L12C9JPN9 530 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 USP17L11C9JVI0 530 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 USP17L21D6R901 530 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 USP17L18D6R9N7 530 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 USP17L22D6RA61 530 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 USP17L17D6RBQ6 530 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 USP17L19D6RCP7 530 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 USP17L20D6RJB6 530 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 USP17L24Q0WX57 530 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 TRIM22Q8IYM9 498 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 TSEN2Q8NCE0 465 aaKnown RBP11.5□□□□□ -0.57
LINC00343-209ENST00000601607 CABP1Q9NZU7 370 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 SERPINA10Q9UK55 444 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 PTPRKQ15262 1439 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 SHANK2Q9UPX8 1470 aa11.5□□□□□ -0.57
LINC00343-209ENST00000601607 MYO3AQ8NEV4 1616 aa11.49□□□□□ -0.57
LINC00343-209ENST00000601607 ALKQ9UM73 1620 aa11.49□□□□□ -0.57
LINC00343-209ENST00000601607 GSK3AP49840 483 aa11.49□□□□□ -0.57
LINC00343-209ENST00000601607 SEC13P55735 322 aa11.49□□□□□ -0.57
LINC00343-209ENST00000601607 DPYDQ12882 1025 aa11.49□□□□□ -0.57
LINC00343-209ENST00000601607 TBCELQ5QJ74 424 aa11.49□□□□□ -0.57
LINC00343-209ENST00000601607 SLC9A9Q8IVB4 645 aa11.49□□□□□ -0.57
LINC00343-209ENST00000601607 ZNF295-AS1Q8N0V1 137 aa11.49□□□□□ -0.57
LINC00343-209ENST00000601607 AIDAQ96BJ3 306 aa11.49□□□□□ -0.57
LINC00343-209ENST00000601607 ZNF837Q96EG3 531 aaPredicted RBP11.49□□□□□ -0.57
LINC00343-209ENST00000601607 SRCAPQ6ZRS2 3230 aa11.48□□□□□ -0.57
LINC00343-209ENST00000601607 M0R2N6 131 aa11.48□□□□□ -0.57
LINC00343-209ENST00000601607 GDF11O95390 407 aa11.48□□□□□ -0.57
LINC00343-209ENST00000601607 MSX1P28360 303 aa11.48□□□□□ -0.57
LINC00343-209ENST00000601607 FOXK2Q01167 660 aa11.48□□□□□ -0.57
LINC00343-209ENST00000601607 RASSF7Q02833 373 aa11.48□□□□□ -0.57
LINC00343-209ENST00000601607 DBN1Q16643 649 aa11.48□□□□□ -0.57
LINC00343-209ENST00000601607 ERICH6Q7L0X2 663 aa11.48□□□□□ -0.57
LINC00343-209ENST00000601607 ANKMY2Q8IV38 441 aa11.48□□□□□ -0.57
LINC00343-209ENST00000601607 ZNF142P52746 1687 aaPredicted RBP11.48□□□□□ -0.57
LINC00343-209ENST00000601607 TROQ12816 1431 aaPredicted RBP11.47□□□□□ -0.57
LINC00343-209ENST00000601607 H7C1W4 665 aa11.47□□□□□ -0.57
LINC00343-209ENST00000601607 GMCL1Q96IK5 515 aa11.47□□□□□ -0.57
LINC00343-209ENST00000601607 CDK11AQ9UQ88 783 aaPredicted RBP11.47□□□□□ -0.57
LINC00343-209ENST00000601607 PARP3Q9Y6F1 533 aa11.47□□□□□ -0.57
LINC00343-209ENST00000601607 ABCC1P33527 1531 aa11.46□□□□□ -0.57
LINC00343-209ENST00000601607 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.46□□□□□ -0.57
LINC00343-209ENST00000601607 TSPAN10Q9H1Z9 355 aaPredicted RBP11.46□□□□□ -0.57
LINC00343-209ENST00000601607 RUBCNLQ9H714 662 aa11.46□□□□□ -0.57
LINC00343-209ENST00000601607 C1orf115Q9H7X2 142 aa11.46□□□□□ -0.57
LINC00343-209ENST00000601607 MROH2AA6NES4 1674 aa11.46□□□□□ -0.58
LINC00343-209ENST00000601607 CSB-PGBD3P0DP91 1061 aa11.45□□□□□ -0.58
LINC00343-209ENST00000601607 POTEAQ6S8J7 498 aa11.45□□□□□ -0.58
LINC00343-209ENST00000601607 PGBD3Q8N328 593 aa11.45□□□□□ -0.58
LINC00343-209ENST00000601607 CCDC82Q8N4S0 544 aa11.45□□□□□ -0.58
LINC00343-209ENST00000601607 KCTD17Q8N5Z5 321 aa11.45□□□□□ -0.58
LINC00343-209ENST00000601607 NUCKS1Q9H1E3 243 aaKnown RBP11.45□□□□□ -0.58
LINC00343-209ENST00000601607 A2ML1A8K2U0 1454 aa11.44□□□□□ -0.58
LINC00343-209ENST00000601607 SRSF11Q05519 484 aaKnown RBP11.44□□□□□ -0.58
LINC00343-209ENST00000601607 NBPF1Q3BBV0 1214 aa11.44□□□□□ -0.58
LINC00343-209ENST00000601607 ZDHHC1Q8WTX9 485 aa11.44□□□□□ -0.58
LINC00343-209ENST00000601607 GTPBP3Q969Y2 492 aaKnown RBP11.44□□□□□ -0.58
LINC00343-209ENST00000601607 NEURL4Q96JN8 1562 aa11.44□□□□□ -0.58
LINC00343-209ENST00000601607 KIDINS220Q9ULH0 1771 aa11.44□□□□□ -0.58
LINC00343-209ENST00000601607 CLIP1P30622 1438 aa11.43□□□□□ -0.58
LINC00343-209ENST00000601607 ARHGEF15O94989 841 aa11.43□□□□□ -0.58
LINC00343-209ENST00000601607 ARXQ96QS3 562 aa11.43□□□□□ -0.58
LINC00343-209ENST00000601607 HINFPQ9BQA5 517 aa11.43□□□□□ -0.58
LINC00343-209ENST00000601607 TIMELESSQ9UNS1 1208 aa11.43□□□□□ -0.58
LINC00343-209ENST00000601607 ZNF232Q9UNY5 417 aa11.43□□□□□ -0.58
LINC00343-209ENST00000601607 VWDEQ8N2E2 1590 aa11.42□□□□□ -0.58
LINC00343-209ENST00000601607 GPR25O00155 361 aa11.42□□□□□ -0.58
LINC00343-209ENST00000601607 LGR5O75473 907 aa11.42□□□□□ -0.58
LINC00343-209ENST00000601607 ADAMTS2O95450 1211 aa11.42□□□□□ -0.58
LINC00343-209ENST00000601607 ATP4AP20648 1035 aa11.42□□□□□ -0.58
LINC00343-209ENST00000601607 NOS2P35228 1153 aa11.42□□□□□ -0.58
LINC00343-209ENST00000601607 MARSP56192 900 aaKnown RBP11.42□□□□□ -0.58
LINC00343-209ENST00000601607 MAP3K10Q02779 954 aa11.42□□□□□ -0.58
LINC00343-209ENST00000601607 TEAD4Q15561 434 aa11.42□□□□□ -0.58
LINC00343-209ENST00000601607 GGT6Q6P531 493 aa11.42□□□□□ -0.58
LINC00343-209ENST00000601607 FOXR1Q6PIV2 292 aa11.42□□□□□ -0.58
LINC00343-209ENST00000601607 L3MBTL2Q969R5 705 aa11.42□□□□□ -0.58
LINC00343-209ENST00000601607 CLTCQ00610 1675 aaKnown RBP11.41□□□□□ -0.58
LINC00343-209ENST00000601607 SERTM1A2A2V5 107 aa11.41□□□□□ -0.58
LINC00343-209ENST00000601607 THBS1P07996 1170 aa11.41□□□□□ -0.58
LINC00343-209ENST00000601607 TATP17735 454 aaPredicted RBP11.41□□□□□ -0.58
LINC00343-209ENST00000601607 SRPK2P78362 688 aaKnown RBP11.41□□□□□ -0.58
LINC00343-209ENST00000601607 KANK3Q6NY19 840 aa11.41□□□□□ -0.58
LINC00343-209ENST00000601607 C1orf216Q8TAB5 229 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms