RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 DUSP27Q5VZP5 1158 aa16.53■□□□□ 0.24
SH2D3A-208ENST00000599563 WDR63Q8IWG1 891 aa16.53■□□□□ 0.24
SH2D3A-208ENST00000599563 XAGE3Q8WTP9 111 aa16.53■□□□□ 0.24
SH2D3A-208ENST00000599563 TAOK3Q9H2K8 898 aa16.53■□□□□ 0.24
SH2D3A-208ENST00000599563 CHPF2Q9P2E5 772 aa16.53■□□□□ 0.24
SH2D3A-208ENST00000599563 KIF3CO14782 793 aa16.52■□□□□ 0.24
SH2D3A-208ENST00000599563 ANXA1P04083 346 aa16.52■□□□□ 0.24
SH2D3A-208ENST00000599563 KRT24Q2M2I5 525 aa16.52■□□□□ 0.24
SH2D3A-208ENST00000599563 CCDC93Q567U6 631 aa16.52■□□□□ 0.24
SH2D3A-208ENST00000599563 NECTIN2Q92692 538 aa16.52■□□□□ 0.24
SH2D3A-208ENST00000599563 RPGRQ92834 1020 aaKnown RBP16.52■□□□□ 0.24
SH2D3A-208ENST00000599563 TSR2Q969E8 191 aaKnown RBP16.52■□□□□ 0.24
SH2D3A-208ENST00000599563 UTP14AQ9BVJ6 771 aaKnown RBP16.52■□□□□ 0.24
SH2D3A-208ENST00000599563 ABCC12Q96J65 1359 aa16.51■□□□□ 0.23
SH2D3A-208ENST00000599563 NTSR2O95665 410 aa16.51■□□□□ 0.23
SH2D3A-208ENST00000599563 AIMP1Q12904 312 aaKnown RBP16.51■□□□□ 0.23
SH2D3A-208ENST00000599563 ERFEQ4G0M1 354 aa16.51■□□□□ 0.23
SH2D3A-208ENST00000599563 GRIPAP1Q4V328 841 aa16.51■□□□□ 0.23
SH2D3A-208ENST00000599563 SUSD4Q5VX71 490 aa16.51■□□□□ 0.23
SH2D3A-208ENST00000599563 CC2D2BQ6DHV5 1058 aa16.51■□□□□ 0.23
SH2D3A-208ENST00000599563 NUTM1Q86Y26 1132 aa16.51■□□□□ 0.23
SH2D3A-208ENST00000599563 ZNF219Q9P2Y4 722 aaPredicted RBP16.51■□□□□ 0.23
SH2D3A-208ENST00000599563 CACNA1FO60840 1977 aa16.51■□□□□ 0.23
SH2D3A-208ENST00000599563 IL16Q14005 1332 aa16.5■□□□□ 0.23
SH2D3A-208ENST00000599563 FANCIQ9NVI1 1328 aa16.5■□□□□ 0.23
SH2D3A-208ENST00000599563 TOMM70O94826 608 aa16.5■□□□□ 0.23
SH2D3A-208ENST00000599563 HOXA10P31260 410 aaPredicted RBP16.5■□□□□ 0.23
SH2D3A-208ENST00000599563 GOLGA2Q08379 1002 aa16.5■□□□□ 0.23
SH2D3A-208ENST00000599563 TCIRG1Q13488 830 aa16.5■□□□□ 0.23
SH2D3A-208ENST00000599563 C16orf71Q8IYS4 520 aaPredicted RBP16.5■□□□□ 0.23
SH2D3A-208ENST00000599563 RTKN2Q8IZC4 609 aa16.5■□□□□ 0.23
SH2D3A-208ENST00000599563 PLBD2Q8NHP8 589 aa16.5■□□□□ 0.23
SH2D3A-208ENST00000599563 C7orf43Q8WVR3 580 aa16.5■□□□□ 0.23
SH2D3A-208ENST00000599563 NLRP3Q96P20 1036 aa16.5■□□□□ 0.23
SH2D3A-208ENST00000599563 SLFN5Q08AF3 891 aa16.49■□□□□ 0.23
SH2D3A-208ENST00000599563 SLC10A5Q5PT55 438 aa16.49■□□□□ 0.23
SH2D3A-208ENST00000599563 DPY19L2Q6NUT2 758 aa16.49■□□□□ 0.23
SH2D3A-208ENST00000599563 ANKRD13DQ6ZTN6 518 aa16.49■□□□□ 0.23
SH2D3A-208ENST00000599563 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
SH2D3A-208ENST00000599563 GLTPD2A6NH11 291 aa16.48■□□□□ 0.23
SH2D3A-208ENST00000599563 NLRP10Q86W26 655 aa16.48■□□□□ 0.23
SH2D3A-208ENST00000599563 CRAMP1Q96RY5 1269 aa16.48■□□□□ 0.23
SH2D3A-208ENST00000599563 NMRK2Q9NPI5 230 aa16.48■□□□□ 0.23
SH2D3A-208ENST00000599563 LAMB2P55268 1798 aa16.48■□□□□ 0.23
SH2D3A-208ENST00000599563 FKBP4Q02790 459 aaKnown RBP eCLIP16.47■□□□□ 0.23
SH2D3A-208ENST00000599563 CCDC30Q5VVM6 783 aa16.47■□□□□ 0.23
SH2D3A-208ENST00000599563 TMX4Q9H1E5 349 aaPredicted RBP16.47■□□□□ 0.23
SH2D3A-208ENST00000599563 SH3TC1Q8TE82 1336 aa16.46■□□□□ 0.23
SH2D3A-208ENST00000599563 PRELPP51888 382 aa16.46■□□□□ 0.23
SH2D3A-208ENST00000599563 TRMT2AQ8IZ69 625 aaKnown RBP16.46■□□□□ 0.23
SH2D3A-208ENST00000599563 RBM46Q8TBY0 533 aaKnown RBP16.46■□□□□ 0.23
SH2D3A-208ENST00000599563 TRMT112Q9UI30 125 aaKnown RBP16.46■□□□□ 0.23
SH2D3A-208ENST00000599563 WDR90Q96KV7 1748 aa16.45■□□□□ 0.22
SH2D3A-208ENST00000599563 E9PSI1 815 aa16.45■□□□□ 0.22
SH2D3A-208ENST00000599563 DDX58O95786 925 aaKnown RBP16.45■□□□□ 0.22
SH2D3A-208ENST00000599563 HSP90B1P14625 803 aaKnown RBP16.45■□□□□ 0.22
SH2D3A-208ENST00000599563 VEGFAP15692 232 aaPredicted RBP16.45■□□□□ 0.22
SH2D3A-208ENST00000599563 HSPA6P17066 643 aa16.45■□□□□ 0.22
SH2D3A-208ENST00000599563 TRIM28Q13263 835 aaKnown RBP16.45■□□□□ 0.22
SH2D3A-208ENST00000599563 ELL2O00472 640 aaPredicted RBP16.44■□□□□ 0.22
SH2D3A-208ENST00000599563 C8orf58Q8NAV2 365 aa16.44■□□□□ 0.22
SH2D3A-208ENST00000599563 PSMD1Q99460 953 aa16.44■□□□□ 0.22
SH2D3A-208ENST00000599563 STK31Q9BXU1 1019 aa16.44■□□□□ 0.22
SH2D3A-208ENST00000599563 RRAGCQ9HB90 399 aa16.44■□□□□ 0.22
SH2D3A-208ENST00000599563 DDX60Q8IY21 1712 aaKnown RBP16.43■□□□□ 0.22
SH2D3A-208ENST00000599563 EXOSC9Q06265 439 aaKnown RBP16.43■□□□□ 0.22
SH2D3A-208ENST00000599563 FSTL1Q12841 308 aa16.43■□□□□ 0.22
SH2D3A-208ENST00000599563 RIC3Q7Z5B4 369 aa16.43■□□□□ 0.22
SH2D3A-208ENST00000599563 TSPYL6Q8N831 410 aa16.43■□□□□ 0.22
SH2D3A-208ENST00000599563 ISCA1Q9BUE6 129 aa16.43■□□□□ 0.22
SH2D3A-208ENST00000599563 SCN4AP35499 1836 aa16.42■□□□□ 0.22
SH2D3A-208ENST00000599563 PPEF1O14829 653 aaPredicted RBP16.42■□□□□ 0.22
SH2D3A-208ENST00000599563 MYH16Q9H6N6 1097 aa16.42■□□□□ 0.22
SH2D3A-208ENST00000599563 BBOX1O75936 387 aa16.41■□□□□ 0.22
SH2D3A-208ENST00000599563 DDX46Q7L014 1031 aaKnown RBP16.41■□□□□ 0.22
SH2D3A-208ENST00000599563 TMC4Q7Z404 712 aa16.41■□□□□ 0.22
SH2D3A-208ENST00000599563 SNED1Q8TER0 1413 aa16.41■□□□□ 0.22
SH2D3A-208ENST00000599563 HCLS1P14317 486 aaPredicted RBP16.4■□□□□ 0.22
SH2D3A-208ENST00000599563 IARSP41252 1262 aaKnown RBP16.4■□□□□ 0.22
SH2D3A-208ENST00000599563 TWISTNBQ3B726 338 aaPredicted RBP16.4■□□□□ 0.22
SH2D3A-208ENST00000599563 SYNE4Q8N205 404 aa16.4■□□□□ 0.22
SH2D3A-208ENST00000599563 SMC1BQ8NDV3 1235 aa16.4■□□□□ 0.22
SH2D3A-208ENST00000599563 JDP2Q8WYK2 163 aa16.4■□□□□ 0.22
SH2D3A-208ENST00000599563 ZNF277Q9NRM2 450 aaPredicted RBP16.4■□□□□ 0.22
SH2D3A-208ENST00000599563 APLP1P51693 650 aa16.39■□□□□ 0.21
SH2D3A-208ENST00000599563 C3orf67Q6ZVT6 689 aa16.39■□□□□ 0.21
SH2D3A-208ENST00000599563 CCDC191Q8NCU4 936 aa16.39■□□□□ 0.21
SH2D3A-208ENST00000599563 SUPT20HQ8NEM7 779 aa16.39■□□□□ 0.21
SH2D3A-208ENST00000599563 VPS33BQ9H267 617 aa16.39■□□□□ 0.21
SH2D3A-208ENST00000599563 PHAXQ9H814 394 aaKnown RBP16.39■□□□□ 0.21
SH2D3A-208ENST00000599563 ATP6V0A2Q9Y487 856 aa16.39■□□□□ 0.21
SH2D3A-208ENST00000599563 ABCC4O15439 1325 aa16.39■□□□□ 0.21
SH2D3A-208ENST00000599563 IQCA1LA6NCM1 817 aa16.38■□□□□ 0.21
SH2D3A-208ENST00000599563 ATP5J2-PTCD1G3V325 749 aa16.38■□□□□ 0.21
SH2D3A-208ENST00000599563 OLFM4Q6UX06 510 aa16.38■□□□□ 0.21
SH2D3A-208ENST00000599563 NEXNQ0ZGT2 675 aa16.37■□□□□ 0.21
SH2D3A-208ENST00000599563 GRAPQ13588 217 aa16.37■□□□□ 0.21
SH2D3A-208ENST00000599563 SF3B3Q15393 1217 aaKnown RBP16.37■□□□□ 0.21
SH2D3A-208ENST00000599563 KSR2Q6VAB6 950 aa16.37■□□□□ 0.21
SH2D3A-208ENST00000599563 SP8Q8IXZ3 490 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms