RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 CHMP4AQ9BY43 222 aa29.18■■■□□ 2.26
CCDC9-204ENST00000599398 FER1L6Q2WGJ9 1857 aa29.17■■■□□ 2.26
CCDC9-204ENST00000599398 SOGA3Q5TF21 947 aa29.17■■■□□ 2.26
CCDC9-204ENST00000599398 CCDC30Q5VVM6 783 aa29.17■■■□□ 2.26
CCDC9-204ENST00000599398 NLRP10Q86W26 655 aa29.17■■■□□ 2.26
CCDC9-204ENST00000599398 RPGRQ92834 1020 aaKnown RBP29.17■■■□□ 2.26
CCDC9-204ENST00000599398 ALDH1B1P30837 517 aa29.16■■■□□ 2.26
CCDC9-204ENST00000599398 C1QTNF8P60827 252 aa29.16■■■□□ 2.26
CCDC9-204ENST00000599398 CRY2Q49AN0 593 aa29.16■■■□□ 2.26
CCDC9-204ENST00000599398 RIC1Q4ADV7 1423 aa29.16■■■□□ 2.26
CCDC9-204ENST00000599398 GOLGA2Q08379 1002 aa29.15■■■□□ 2.26
CCDC9-204ENST00000599398 PHAXQ9H814 394 aaKnown RBP29.15■■■□□ 2.26
CCDC9-204ENST00000599398 PRELPP51888 382 aa29.14■■■□□ 2.26
CCDC9-204ENST00000599398 WDR63Q8IWG1 891 aa29.14■■■□□ 2.26
CCDC9-204ENST00000599398 ZNF428Q96B54 188 aa29.14■■■□□ 2.26
CCDC9-204ENST00000599398 TAOK3Q9H2K8 898 aa29.14■■■□□ 2.26
CCDC9-204ENST00000599398 TRMT112Q9UI30 125 aaKnown RBP29.14■■■□□ 2.26
CCDC9-204ENST00000599398 RIC3Q7Z5B4 369 aa29.13■■■□□ 2.25
CCDC9-204ENST00000599398 NLRP3Q96P20 1036 aa29.13■■■□□ 2.25
CCDC9-204ENST00000599398 RNF123Q5XPI4 1314 aa29.13■■■□□ 2.25
CCDC9-204ENST00000599398 TWISTNBQ3B726 338 aaPredicted RBP29.12■■■□□ 2.25
CCDC9-204ENST00000599398 CCDC93Q567U6 631 aa29.12■■■□□ 2.25
CCDC9-204ENST00000599398 ATP5J2-PTCD1G3V325 749 aa29.11■■■□□ 2.25
CCDC9-204ENST00000599398 C3orf67Q6ZVT6 689 aa29.11■■■□□ 2.25
CCDC9-204ENST00000599398 C7orf43Q8WVR3 580 aa29.11■■■□□ 2.25
CCDC9-204ENST00000599398 RBM17Q96I25 401 aaKnown RBP29.11■■■□□ 2.25
CCDC9-204ENST00000599398 FANCIQ9NVI1 1328 aa29.11■■■□□ 2.25
CCDC9-204ENST00000599398 SLC10A5Q5PT55 438 aa29.1■■■□□ 2.25
CCDC9-204ENST00000599398 STK31Q9BXU1 1019 aa29.1■■■□□ 2.25
CCDC9-204ENST00000599398 SH3TC1Q8TE82 1336 aa29.1■■■□□ 2.25
CCDC9-204ENST00000599398 TIAM2Q8IVF5 1701 aa29.09■■■□□ 2.25
CCDC9-204ENST00000599398 TCERG1O14776 1098 aaKnown RBP29.09■■■□□ 2.25
CCDC9-204ENST00000599398 OLFM4Q6UX06 510 aa29.09■■■□□ 2.25
CCDC9-204ENST00000599398 SYNE4Q8N205 404 aa29.09■■■□□ 2.25
CCDC9-204ENST00000599398 ISCA1Q9BUE6 129 aa29.09■■■□□ 2.25
CCDC9-204ENST00000599398 KDM2BQ8NHM5 1336 aa29.09■■■□□ 2.25
CCDC9-204ENST00000599398 LTBP3Q9NS15 1303 aa29.09■■■□□ 2.25
CCDC9-204ENST00000599398 ZC3H4Q9UPT8 1303 aaKnown RBP29.09■■■□□ 2.25
CCDC9-204ENST00000599398 HCLS1P14317 486 aaPredicted RBP29.08■■■□□ 2.25
CCDC9-204ENST00000599398 HOXA10P31260 410 aaPredicted RBP29.08■■■□□ 2.25
CCDC9-204ENST00000599398 NMRK2Q9NPI5 230 aa29.08■■■□□ 2.25
CCDC9-204ENST00000599398 DDX58O95786 925 aaKnown RBP29.07■■■□□ 2.24
CCDC9-204ENST00000599398 DICER1Q9UPY3 1922 aaKnown RBP29.07■■■□□ 2.24
CCDC9-204ENST00000599398 KIF3CO14782 793 aa29.06■■■□□ 2.24
CCDC9-204ENST00000599398 RTKN2Q8IZC4 609 aa29.06■■■□□ 2.24
CCDC9-204ENST00000599398 CRAMP1Q96RY5 1269 aa29.06■■■□□ 2.24
CCDC9-204ENST00000599398 MYD88Q99836 296 aa29.05■■■□□ 2.24
CCDC9-204ENST00000599398 LAMB2P55268 1798 aa29.05■■■□□ 2.24
CCDC9-204ENST00000599398 FAM89AQ96GI7 184 aa29.04■■■□□ 2.24
CCDC9-204ENST00000599398 PPEF1O14829 653 aaPredicted RBP29.03■■■□□ 2.24
CCDC9-204ENST00000599398 FKBP4Q02790 459 aaKnown RBP eCLIP29.03■■■□□ 2.24
CCDC9-204ENST00000599398 EXOSC9Q06265 439 aaKnown RBP29.03■■■□□ 2.24
CCDC9-204ENST00000599398 RTL5Q5HYW3 569 aaPredicted RBP29.03■■■□□ 2.24
CCDC9-204ENST00000599398 MYH16Q9H6N6 1097 aa29.03■■■□□ 2.24
CCDC9-204ENST00000599398 SPINK5Q9NQ38 1064 aaPredicted RBP29.03■■■□□ 2.24
CCDC9-204ENST00000599398 TRIM28Q13263 835 aaKnown RBP29.02■■■□□ 2.24
CCDC9-204ENST00000599398 SLC4A2P04920 1241 aa29.01■■■□□ 2.23
CCDC9-204ENST00000599398 ZNF277Q9NRM2 450 aaPredicted RBP29.01■■■□□ 2.23
CCDC9-204ENST00000599398 GLTPD2A6NH11 291 aa29■■■□□ 2.23
CCDC9-204ENST00000599398 CC2D2BQ6DHV5 1058 aa29■■■□□ 2.23
CCDC9-204ENST00000599398 RRAGCQ9HB90 399 aa29■■■□□ 2.23
CCDC9-204ENST00000599398 MAP3K2Q9Y2U5 619 aa29■■■□□ 2.23
CCDC9-204ENST00000599398 DDX60Q8IY21 1712 aaKnown RBP29■■■□□ 2.23
CCDC9-204ENST00000599398 ABCC4O15439 1325 aa28.99■■■□□ 2.23
CCDC9-204ENST00000599398 DPY19L2Q6NUT2 758 aa28.99■■■□□ 2.23
CCDC9-204ENST00000599398 DDX46Q7L014 1031 aaKnown RBP28.99■■■□□ 2.23
CCDC9-204ENST00000599398 METTL22Q9BUU2 404 aaPredicted RBP28.99■■■□□ 2.23
CCDC9-204ENST00000599398 TMX4Q9H1E5 349 aaPredicted RBP28.99■■■□□ 2.23
CCDC9-204ENST00000599398 PI4KAP2A4QPH2 592 aa28.98■■■□□ 2.23
CCDC9-204ENST00000599398 VAMP4O75379 141 aa28.98■■■□□ 2.23
CCDC9-204ENST00000599398 KSR2Q6VAB6 950 aa28.98■■■□□ 2.23
CCDC9-204ENST00000599398 C16orf71Q8IYS4 520 aaPredicted RBP28.98■■■□□ 2.23
CCDC9-204ENST00000599398 PI4KAP1Q8N8J0 262 aa28.98■■■□□ 2.23
CCDC9-204ENST00000599398 CACNA1FO60840 1977 aa28.97■■■□□ 2.23
CCDC9-204ENST00000599398 G2E3Q7L622 706 aa28.97■■■□□ 2.23
CCDC9-204ENST00000599398 CCDC191Q8NCU4 936 aa28.97■■■□□ 2.23
CCDC9-204ENST00000599398 CCER2I3L3R5 266 aa28.96■■■□□ 2.23
CCDC9-204ENST00000599398 IRS4O14654 1257 aaPredicted RBP28.96■■■□□ 2.23
CCDC9-204ENST00000599398 SLC51AQ86UW1 340 aa28.96■■■□□ 2.23
CCDC9-204ENST00000599398 PSMD1Q99460 953 aa28.96■■■□□ 2.23
CCDC9-204ENST00000599398 CWC25Q9NXE8 425 aaPredicted RBP28.96■■■□□ 2.23
CCDC9-204ENST00000599398 TOMM70O94826 608 aa28.95■■■□□ 2.22
CCDC9-204ENST00000599398 GRIPAP1Q4V328 841 aa28.95■■■□□ 2.22
CCDC9-204ENST00000599398 ZBTB38Q8NAP3 1195 aaPredicted RBP28.95■■■□□ 2.22
CCDC9-204ENST00000599398 TAF1P21675 1872 aa28.95■■■□□ 2.22
CCDC9-204ENST00000599398 IARSP41252 1262 aaKnown RBP28.94■■■□□ 2.22
CCDC9-204ENST00000599398 NEXNQ0ZGT2 675 aa28.94■■■□□ 2.22
CCDC9-204ENST00000599398 ATP6V0A2Q9Y487 856 aa28.94■■■□□ 2.22
CCDC9-204ENST00000599398 SNED1Q8TER0 1413 aa28.94■■■□□ 2.22
CCDC9-204ENST00000599398 ZNF521Q96K83 1311 aa28.94■■■□□ 2.22
CCDC9-204ENST00000599398 BBOX1O75936 387 aa28.93■■■□□ 2.22
CCDC9-204ENST00000599398 FLIIQ13045 1269 aa28.93■■■□□ 2.22
CCDC9-204ENST00000599398 GRAPQ13588 217 aa28.93■■■□□ 2.22
CCDC9-204ENST00000599398 GRAPLQ8TC17 118 aaPredicted RBP28.93■■■□□ 2.22
CCDC9-204ENST00000599398 FKBP5Q13451 457 aaPredicted RBP28.92■■■□□ 2.22
CCDC9-204ENST00000599398 PCCAP05165 728 aaPredicted RBP28.91■■■□□ 2.22
CCDC9-204ENST00000599398 HSP90B1P14625 803 aaKnown RBP28.91■■■□□ 2.22
CCDC9-204ENST00000599398 SF3B3Q15393 1217 aaKnown RBP28.91■■■□□ 2.22
CCDC9-204ENST00000599398 JARID2Q92833 1246 aaPredicted RBP28.91■■■□□ 2.22
CCDC9-204ENST00000599398 VEGFAP15692 232 aaPredicted RBP28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms