RNA–Protein interactions for RNA: ENST00000599019.5

PRKD2-212, Transcript of protein kinase D2, humanhuman

TSL 5

Gene PRKD2, Length 1,703 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-212ENST00000599019 SASH1O94885 1247 aa25.68■■□□□ 1.7
PRKD2-212ENST00000599019 MAP4K4O95819 1239 aaPredicted RBP25.68■■□□□ 1.7
PRKD2-212ENST00000599019 PLBD2Q8NHP8 589 aa25.68■■□□□ 1.7
PRKD2-212ENST00000599019 USP16Q9Y5T5 823 aa25.68■■□□□ 1.7
PRKD2-212ENST00000599019 NKX1-1Q15270 411 aaPredicted RBP25.67■■□□□ 1.7
PRKD2-212ENST00000599019 ZCRB1Q8TBF4 217 aaKnown RBP25.67■■□□□ 1.7
PRKD2-212ENST00000599019 GRPEL1Q9HAV7 217 aa25.67■■□□□ 1.7
PRKD2-212ENST00000599019 PRDM11Q9NQV5 511 aa25.67■■□□□ 1.7
PRKD2-212ENST00000599019 DDX49Q9Y6V7 483 aaKnown RBP25.67■■□□□ 1.7
PRKD2-212ENST00000599019 GLI3P10071 1580 aa25.67■■□□□ 1.7
PRKD2-212ENST00000599019 PLCH1Q4KWH8 1693 aa25.67■■□□□ 1.7
PRKD2-212ENST00000599019 NWD2Q9ULI1 1742 aa25.67■■□□□ 1.7
PRKD2-212ENST00000599019 RABL6Q3YEC7 729 aaPredicted RBP25.66■■□□□ 1.7
PRKD2-212ENST00000599019 KCNB2Q92953 911 aa25.66■■□□□ 1.7
PRKD2-212ENST00000599019 SNRKQ9NRH2 765 aa25.66■■□□□ 1.7
PRKD2-212ENST00000599019 MCTP1Q6DN14 999 aa25.66■■□□□ 1.7
PRKD2-212ENST00000599019 TM6SF1Q9BZW5 370 aa25.66■■□□□ 1.7
PRKD2-212ENST00000599019 IL25Q9H293 177 aa25.66■■□□□ 1.7
PRKD2-212ENST00000599019 SNX14Q9Y5W7 946 aa25.66■■□□□ 1.7
PRKD2-212ENST00000599019 COL5A2P05997 1499 aaPredicted RBP25.65■■□□□ 1.7
PRKD2-212ENST00000599019 ARFGEF2Q9Y6D5 1785 aa25.65■■□□□ 1.7
PRKD2-212ENST00000599019 CWC27Q6UX04 472 aaKnown RBP25.65■■□□□ 1.7
PRKD2-212ENST00000599019 FAM43AQ8N2R8 423 aa25.65■■□□□ 1.7
PRKD2-212ENST00000599019 BRD1O95696 1058 aa25.64■■□□□ 1.7
PRKD2-212ENST00000599019 CARD10Q9BWT7 1032 aa25.64■■□□□ 1.7
PRKD2-212ENST00000599019 ZDHHC9Q9Y397 364 aa25.64■■□□□ 1.7
PRKD2-212ENST00000599019 COL14A1Q05707 1796 aaKnown RBP25.64■■□□□ 1.69
PRKD2-212ENST00000599019 TOM1L2Q6ZVM7 507 aa25.63■■□□□ 1.69
PRKD2-212ENST00000599019 UBR2Q8IWV8 1755 aa25.63■■□□□ 1.69
PRKD2-212ENST00000599019 EAF2Q96CJ1 260 aaPredicted RBP25.63■■□□□ 1.69
PRKD2-212ENST00000599019 GJD4Q96KN9 370 aaPredicted RBP25.63■■□□□ 1.69
PRKD2-212ENST00000599019 LMBRD1Q9NUN5 540 aa25.63■■□□□ 1.69
PRKD2-212ENST00000599019 PAPPAQ13219 1627 aa25.62■■□□□ 1.69
PRKD2-212ENST00000599019 RFX7Q2KHR2 1363 aa25.62■■□□□ 1.69
PRKD2-212ENST00000599019 TTC14Q96N46 770 aa25.62■■□□□ 1.69
PRKD2-212ENST00000599019 AFDNP55196 1824 aaKnown RBP25.62■■□□□ 1.69
PRKD2-212ENST00000599019 PKP1Q13835 747 aa25.61■■□□□ 1.69
PRKD2-212ENST00000599019 UPF3BQ9BZI7 483 aaKnown RBP25.61■■□□□ 1.69
PRKD2-212ENST00000599019 BTG4Q9NY30 223 aa25.61■■□□□ 1.69
PRKD2-212ENST00000599019 IL2RBP14784 551 aa25.6■■□□□ 1.69
PRKD2-212ENST00000599019 VPS72Q15906 364 aa25.6■■□□□ 1.69
PRKD2-212ENST00000599019 TICAM2Q86XR7 235 aa25.6■■□□□ 1.69
PRKD2-212ENST00000599019 ZNF445P59923 1031 aa25.6■■□□□ 1.69
PRKD2-212ENST00000599019 LIMCH1Q9UPQ0 1083 aa25.6■■□□□ 1.69
PRKD2-212ENST00000599019 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.6■■□□□ 1.69
PRKD2-212ENST00000599019 WDR33Q9C0J8 1336 aaKnown RBP25.59■■□□□ 1.69
PRKD2-212ENST00000599019 RFX5P48382 616 aaPredicted RBP25.59■■□□□ 1.69
PRKD2-212ENST00000599019 ZSCAN31Q96LW9 406 aaPredicted RBP25.59■■□□□ 1.69
PRKD2-212ENST00000599019 NRAPQ86VF7 1730 aa25.58■■□□□ 1.69
PRKD2-212ENST00000599019 CCDC171Q6TFL3 1326 aa25.58■■□□□ 1.69
PRKD2-212ENST00000599019 MBD3O95983 291 aa25.58■■□□□ 1.69
PRKD2-212ENST00000599019 ZKSCAN1P17029 563 aaPredicted RBP25.58■■□□□ 1.69
PRKD2-212ENST00000599019 VPS53Q5VIR6 699 aa25.57■■□□□ 1.68
PRKD2-212ENST00000599019 TNS2Q63HR2 1409 aa25.57■■□□□ 1.68
PRKD2-212ENST00000599019 A0A087WZG4 1122 aa25.57■■□□□ 1.68
PRKD2-212ENST00000599019 PDIA4P13667 645 aaKnown RBP25.57■■□□□ 1.68
PRKD2-212ENST00000599019 ATP5JP18859 108 aa25.57■■□□□ 1.68
PRKD2-212ENST00000599019 EPHA10Q5JZY3 1008 aa25.57■■□□□ 1.68
PRKD2-212ENST00000599019 CCDC8Q9H0W5 538 aaPredicted RBP25.57■■□□□ 1.68
PRKD2-212ENST00000599019 KCPQ6ZWJ8 1503 aa25.57■■□□□ 1.68
PRKD2-212ENST00000599019 CASP7P55210 303 aa25.56■■□□□ 1.68
PRKD2-212ENST00000599019 PTPN12Q05209 780 aaKnown RBP25.56■■□□□ 1.68
PRKD2-212ENST00000599019 SH2B1Q9NRF2 756 aaPredicted RBP25.56■■□□□ 1.68
PRKD2-212ENST00000599019 H7C1W4 665 aa25.55■■□□□ 1.68
PRKD2-212ENST00000599019 NECTIN1Q15223 517 aa25.55■■□□□ 1.68
PRKD2-212ENST00000599019 RNF20Q5VTR2 975 aa25.55■■□□□ 1.68
PRKD2-212ENST00000599019 UBE3BQ7Z3V4 1068 aa25.55■■□□□ 1.68
PRKD2-212ENST00000599019 MAP4K1Q92918 833 aa25.55■■□□□ 1.68
PRKD2-212ENST00000599019 ZSWIM6Q9HCJ5 1215 aa25.55■■□□□ 1.68
PRKD2-212ENST00000599019 PSMA5P28066 241 aa25.54■■□□□ 1.68
PRKD2-212ENST00000599019 RASEFQ8IZ41 740 aa25.54■■□□□ 1.68
PRKD2-212ENST00000599019 SIL1Q9H173 461 aa25.54■■□□□ 1.68
PRKD2-212ENST00000599019 AK2P54819 239 aa25.54■■□□□ 1.68
PRKD2-212ENST00000599019 TNNI3KQ59H18 835 aa25.54■■□□□ 1.68
PRKD2-212ENST00000599019 FSD1Q9BTV5 496 aa25.54■■□□□ 1.68
PRKD2-212ENST00000599019 CYP46A1Q9Y6A2 500 aa25.54■■□□□ 1.68
PRKD2-212ENST00000599019 FPGT-TNNI3KV9GXZ4 949 aa25.54■■□□□ 1.68
PRKD2-212ENST00000599019 NUP188Q5SRE5 1749 aa25.53■■□□□ 1.68
PRKD2-212ENST00000599019 PRPF40AO75400 957 aaKnown RBP25.53■■□□□ 1.68
PRKD2-212ENST00000599019 GPR108Q9NPR9 543 aa25.53■■□□□ 1.68
PRKD2-212ENST00000599019 CWC25Q9NXE8 425 aaPredicted RBP25.53■■□□□ 1.68
PRKD2-212ENST00000599019 PTH1RQ03431 593 aa25.52■■□□□ 1.68
PRKD2-212ENST00000599019 NMIQ13287 307 aaPredicted RBP25.52■■□□□ 1.68
PRKD2-212ENST00000599019 CCDC191Q8NCU4 936 aa25.52■■□□□ 1.68
PRKD2-212ENST00000599019 HMG20BQ9P0W2 317 aa25.52■■□□□ 1.68
PRKD2-212ENST00000599019 MED23Q9ULK4 1368 aa25.52■■□□□ 1.68
PRKD2-212ENST00000599019 NBPF26B4DH59 902 aa25.51■■□□□ 1.68
PRKD2-212ENST00000599019 CASTP20810 708 aaKnown RBP25.51■■□□□ 1.68
PRKD2-212ENST00000599019 NBPF14Q5TI25 921 aa25.51■■□□□ 1.68
PRKD2-212ENST00000599019 NBPF10Q6P3W6 841 aaKnown RBP25.51■■□□□ 1.68
PRKD2-212ENST00000599019 NBPF15Q8N660 670 aa25.51■■□□□ 1.68
PRKD2-212ENST00000599019 PRPF40BQ6NWY9 871 aaKnown RBP25.51■■□□□ 1.67
PRKD2-212ENST00000599019 GAS2L3Q86XJ1 694 aa25.51■■□□□ 1.67
PRKD2-212ENST00000599019 TEX13AQ9BXU3 409 aaPredicted RBP25.51■■□□□ 1.67
PRKD2-212ENST00000599019 SHANK3Q9BYB0 1731 aa25.51■■□□□ 1.67
PRKD2-212ENST00000599019 ALDH8A1Q9H2A2 487 aaPredicted RBP25.51■■□□□ 1.67
PRKD2-212ENST00000599019 BOLA2Q9H3K6 86 aa25.51■■□□□ 1.67
PRKD2-212ENST00000599019 ATG3Q9NT62 314 aa25.51■■□□□ 1.67
PRKD2-212ENST00000599019 PDRG1Q9NUG6 133 aa25.51■■□□□ 1.67
PRKD2-212ENST00000599019 CCDC9Q9Y3X0 531 aaKnown RBP25.51■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms