RNA–Protein interactions for RNA: ENST00000598860.1

SMG9-207, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-207ENST00000598860 PDXDC2PQ6P474 469 aa14.2□□□□□ -0.14
SMG9-207ENST00000598860 PKD2L1Q9P0L9 805 aa14.2□□□□□ -0.14
SMG9-207ENST00000598860 WNT7AO00755 349 aa14.19□□□□□ -0.14
SMG9-207ENST00000598860 GDF9O60383 454 aa14.19□□□□□ -0.14
SMG9-207ENST00000598860 RBM6P78332 1123 aaKnown RBP14.19□□□□□ -0.14
SMG9-207ENST00000598860 BPHLQ86WA6 291 aaPredicted RBP14.19□□□□□ -0.14
SMG9-207ENST00000598860 EHBP1Q8NDI1 1231 aa14.19□□□□□ -0.14
SMG9-207ENST00000598860 ACEP12821 1306 aa14.18□□□□□ -0.14
SMG9-207ENST00000598860 TNFRSF10AO00220 468 aa14.18□□□□□ -0.14
SMG9-207ENST00000598860 TRIM67Q6ZTA4 783 aa14.18□□□□□ -0.14
SMG9-207ENST00000598860 SH3BP5LQ7L8J4 393 aa14.18□□□□□ -0.14
SMG9-207ENST00000598860 MRGPRX2Q96LB1 330 aa14.18□□□□□ -0.14
SMG9-207ENST00000598860 POLR3GLQ9BT43 218 aa14.18□□□□□ -0.14
SMG9-207ENST00000598860 ALG2Q9H553 416 aa14.18□□□□□ -0.14
SMG9-207ENST00000598860 TRPC5Q9UL62 973 aaPredicted RBP14.18□□□□□ -0.14
SMG9-207ENST00000598860 PPIP5K1Q6PFW1 1433 aa14.17□□□□□ -0.14
SMG9-207ENST00000598860 C4orf48Q5BLP8 95 aa14.17□□□□□ -0.14
SMG9-207ENST00000598860 MAGEB6P1A0A0J9YX57 407 aa14.16□□□□□ -0.14
SMG9-207ENST00000598860 PTK2Q05397 1052 aa14.16□□□□□ -0.14
SMG9-207ENST00000598860 SH3RF1Q7Z6J0 888 aa14.16□□□□□ -0.14
SMG9-207ENST00000598860 ARHGAP9Q9BRR9 750 aa14.16□□□□□ -0.14
SMG9-207ENST00000598860 CABP1Q9NZU7 370 aa14.16□□□□□ -0.14
SMG9-207ENST00000598860 POLR3AO14802 1390 aaPredicted RBP14.16□□□□□ -0.14
SMG9-207ENST00000598860 MARF1Q9Y4F3 1742 aaKnown RBP14.15□□□□□ -0.14
SMG9-207ENST00000598860 KIF20BQ96Q89 1820 aa14.15□□□□□ -0.14
SMG9-207ENST00000598860 ANKRD36BQ8N2N9 1353 aa14.15□□□□□ -0.14
SMG9-207ENST00000598860 VARSP26640 1264 aaKnown RBP14.15□□□□□ -0.14
SMG9-207ENST00000598860 SOX11P35716 441 aa14.15□□□□□ -0.14
SMG9-207ENST00000598860 RETREG2Q8NC44 543 aa14.15□□□□□ -0.14
SMG9-207ENST00000598860 CARD14Q9BXL6 1004 aa14.15□□□□□ -0.14
SMG9-207ENST00000598860 TRPM3Q9HCF6 1732 aaPredicted RBP14.15□□□□□ -0.14
SMG9-207ENST00000598860 UNC5CLQ8IV45 518 aa14.14□□□□□ -0.15
SMG9-207ENST00000598860 TRAIPQ9BWF2 469 aa14.14□□□□□ -0.15
SMG9-207ENST00000598860 PDZRN3Q9UPQ7 1066 aa14.14□□□□□ -0.15
SMG9-207ENST00000598860 ANKRD26Q9UPS8 1709 aa14.14□□□□□ -0.15
SMG9-207ENST00000598860 NRKQ7Z2Y5 1582 aa14.13□□□□□ -0.15
SMG9-207ENST00000598860 BCL9LQ86UU0 1499 aa14.13□□□□□ -0.15
SMG9-207ENST00000598860 FAM83GA6ND36 823 aa14.13□□□□□ -0.15
SMG9-207ENST00000598860 PRR20EP86478 221 aa14.13□□□□□ -0.15
SMG9-207ENST00000598860 PRR20CP86479 221 aa14.13□□□□□ -0.15
SMG9-207ENST00000598860 PRR20DP86480 221 aa14.13□□□□□ -0.15
SMG9-207ENST00000598860 PRR20BP86481 221 aa14.13□□□□□ -0.15
SMG9-207ENST00000598860 PRR20AP86496 221 aa14.13□□□□□ -0.15
SMG9-207ENST00000598860 TMC1Q8TDI8 760 aa14.13□□□□□ -0.15
SMG9-207ENST00000598860 TERF2IPQ9NYB0 399 aa14.13□□□□□ -0.15
SMG9-207ENST00000598860 GPSM3Q9Y4H4 160 aa14.13□□□□□ -0.15
SMG9-207ENST00000598860 CDK12Q9NYV4 1490 aaPredicted RBP14.12□□□□□ -0.15
SMG9-207ENST00000598860 ALS2Q96Q42 1657 aa14.12□□□□□ -0.15
SMG9-207ENST00000598860 NUTM2GQ5VZR2 741 aa14.12□□□□□ -0.15
SMG9-207ENST00000598860 HDGFL2Q7Z4V5 671 aaPredicted RBP14.12□□□□□ -0.15
SMG9-207ENST00000598860 ZBTB33Q86T24 672 aa14.12□□□□□ -0.15
SMG9-207ENST00000598860 ABTB2Q8N961 1025 aa14.12□□□□□ -0.15
SMG9-207ENST00000598860 OCSTAMPQ9BR26 566 aa14.12□□□□□ -0.15
SMG9-207ENST00000598860 PPP1R12CQ9BZL4 782 aa14.12□□□□□ -0.15
SMG9-207ENST00000598860 ATRNO75882 1429 aa14.12□□□□□ -0.15
SMG9-207ENST00000598860 CD163L1Q9NR16 1453 aa14.12□□□□□ -0.15
SMG9-207ENST00000598860 BRD4O60885 1362 aaPredicted RBP14.11□□□□□ -0.15
SMG9-207ENST00000598860 ZBBXA8MT70 800 aa14.11□□□□□ -0.15
SMG9-207ENST00000598860 CPSF1Q10570 1443 aaKnown RBP14.11□□□□□ -0.15
SMG9-207ENST00000598860 DDX10Q13206 875 aaKnown RBP14.11□□□□□ -0.15
SMG9-207ENST00000598860 A0A1W2PP64 1363 aa14.1□□□□□ -0.15
SMG9-207ENST00000598860 SIAH2O43255 324 aa14.1□□□□□ -0.15
SMG9-207ENST00000598860 RFX1P22670 979 aa14.1□□□□□ -0.15
SMG9-207ENST00000598860 FAM174AQ8TBP5 190 aa14.1□□□□□ -0.15
SMG9-207ENST00000598860 PBXIP1Q96AQ6 731 aa14.1□□□□□ -0.15
SMG9-207ENST00000598860 UCN2Q96RP3 112 aa14.1□□□□□ -0.15
SMG9-207ENST00000598860 SLC12A5Q9H2X9 1139 aa14.1□□□□□ -0.15
SMG9-207ENST00000598860 SLIT2O94813 1529 aa14.1□□□□□ -0.15
SMG9-207ENST00000598860 GFRA3O60609 400 aa14.09□□□□□ -0.15
SMG9-207ENST00000598860 FBXO45P0C2W1 286 aa14.09□□□□□ -0.15
SMG9-207ENST00000598860 NR1H3Q13133 447 aa14.09□□□□□ -0.15
SMG9-207ENST00000598860 SEMA3FQ13275 785 aa14.09□□□□□ -0.15
SMG9-207ENST00000598860 NLRP13Q86W25 1043 aa14.09□□□□□ -0.15
SMG9-207ENST00000598860 CYP4X1Q8N118 509 aa14.09□□□□□ -0.15
SMG9-207ENST00000598860 ADAM32Q8TC27 787 aa14.09□□□□□ -0.15
SMG9-207ENST00000598860 USP6P35125 1406 aa14.08□□□□□ -0.15
SMG9-207ENST00000598860 EDC4Q6P2E9 1401 aaKnown RBP14.08□□□□□ -0.15
SMG9-207ENST00000598860 USP54Q70EL1 1684 aa14.08□□□□□ -0.16
SMG9-207ENST00000598860 ERFEQ4G0M1 354 aa14.08□□□□□ -0.16
SMG9-207ENST00000598860 C1QTNF2Q9BXJ5 285 aa14.08□□□□□ -0.16
SMG9-207ENST00000598860 PANK3Q9H999 370 aa14.08□□□□□ -0.16
SMG9-207ENST00000598860 PRDM11Q9NQV5 511 aa14.08□□□□□ -0.16
SMG9-207ENST00000598860 CCDC9Q9Y3X0 531 aaKnown RBP14.08□□□□□ -0.16
SMG9-207ENST00000598860 TLL2Q9Y6L7 1015 aa14.08□□□□□ -0.16
SMG9-207ENST00000598860 KTN1Q86UP2 1357 aaKnown RBP14.08□□□□□ -0.16
SMG9-207ENST00000598860 ABCA3Q99758 1704 aa14.07□□□□□ -0.16
SMG9-207ENST00000598860 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.07□□□□□ -0.16
SMG9-207ENST00000598860 TTC24A2A3L6 582 aaPredicted RBP14.07□□□□□ -0.16
SMG9-207ENST00000598860 PALM3A6NDB9 673 aaPredicted RBP14.07□□□□□ -0.16
SMG9-207ENST00000598860 ZC3H6P61129 1189 aaKnown RBP14.07□□□□□ -0.16
SMG9-207ENST00000598860 VPS72Q15906 364 aa14.07□□□□□ -0.16
SMG9-207ENST00000598860 SNIP1Q8TAD8 396 aaKnown RBP14.07□□□□□ -0.16
SMG9-207ENST00000598860 IRX2Q9BZI1 471 aaPredicted RBP14.07□□□□□ -0.16
SMG9-207ENST00000598860 BTG4Q9NY30 223 aa14.07□□□□□ -0.16
SMG9-207ENST00000598860 NPC1L1Q9UHC9 1359 aa14.07□□□□□ -0.16
SMG9-207ENST00000598860 RGS12O14924 1447 aa14.07□□□□□ -0.16
SMG9-207ENST00000598860 NSD3Q9BZ95 1437 aa14.07□□□□□ -0.16
SMG9-207ENST00000598860 ZBTB7CA1YPR0 619 aa14.06□□□□□ -0.16
SMG9-207ENST00000598860 TOR4AQ9NXH8 423 aa14.06□□□□□ -0.16
SMG9-207ENST00000598860 KNSTRNQ9Y448 316 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms