RNA–Protein interactions for RNA: ENST00000598570.5

USHBP1-209, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 3

Gene USHBP1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-209ENST00000598570 BCS1LQ9Y276 419 aa22.69■■□□□ 1.22
USHBP1-209ENST00000598570 KSR2Q6VAB6 950 aa22.68■■□□□ 1.22
USHBP1-209ENST00000598570 STK31Q9BXU1 1019 aa22.68■■□□□ 1.22
USHBP1-209ENST00000598570 ADCY9O60503 1353 aa22.67■■□□□ 1.22
USHBP1-209ENST00000598570 NPR1P16066 1061 aa22.67■■□□□ 1.22
USHBP1-209ENST00000598570 G2E3Q7L622 706 aa22.67■■□□□ 1.22
USHBP1-209ENST00000598570 PELP1Q8IZL8 1130 aaKnown RBP22.67■■□□□ 1.22
USHBP1-209ENST00000598570 CNKSR1Q969H4 720 aa22.67■■□□□ 1.22
USHBP1-209ENST00000598570 METTL22Q9BUU2 404 aaPredicted RBP22.67■■□□□ 1.22
USHBP1-209ENST00000598570 TNRC6CQ9HCJ0 1690 aaKnown RBP22.66■■□□□ 1.22
USHBP1-209ENST00000598570 DDX58O95786 925 aaKnown RBP22.66■■□□□ 1.22
USHBP1-209ENST00000598570 NUTM1Q86Y26 1132 aa22.66■■□□□ 1.22
USHBP1-209ENST00000598570 ZNF428Q96B54 188 aa22.66■■□□□ 1.22
USHBP1-209ENST00000598570 SLX4Q8IY92 1834 aa22.66■■□□□ 1.22
USHBP1-209ENST00000598570 CDCA7LQ96GN5 454 aa22.65■■□□□ 1.22
USHBP1-209ENST00000598570 YY1P25490 414 aa22.64■■□□□ 1.21
USHBP1-209ENST00000598570 RIC3Q7Z5B4 369 aa22.64■■□□□ 1.21
USHBP1-209ENST00000598570 CCDC191Q8NCU4 936 aa22.64■■□□□ 1.21
USHBP1-209ENST00000598570 PI4KAP2A4QPH2 592 aa22.63■■□□□ 1.21
USHBP1-209ENST00000598570 FAM177BA6PVY3 158 aa22.63■■□□□ 1.21
USHBP1-209ENST00000598570 GTF2E1P29083 439 aaPredicted RBP22.63■■□□□ 1.21
USHBP1-209ENST00000598570 FLIIQ13045 1269 aa22.63■■□□□ 1.21
USHBP1-209ENST00000598570 PI4KAP1Q8N8J0 262 aa22.63■■□□□ 1.21
USHBP1-209ENST00000598570 SBF1O95248 1867 aa22.62■■□□□ 1.21
USHBP1-209ENST00000598570 SH3TC1Q8TE82 1336 aa22.62■■□□□ 1.21
USHBP1-209ENST00000598570 NPHP1O15259 732 aa22.62■■□□□ 1.21
USHBP1-209ENST00000598570 IGKV5-2P06315 115 aa22.62■■□□□ 1.21
USHBP1-209ENST00000598570 CT47B1P0C2W7 299 aaPredicted RBP22.62■■□□□ 1.21
USHBP1-209ENST00000598570 C3orf67Q6ZVT6 689 aa22.62■■□□□ 1.21
USHBP1-209ENST00000598570 CRAMP1Q96RY5 1269 aa22.62■■□□□ 1.21
USHBP1-209ENST00000598570 WWC3Q9ULE0 1092 aa22.62■■□□□ 1.21
USHBP1-209ENST00000598570 ATP5J2-PTCD1G3V325 749 aa22.61■■□□□ 1.21
USHBP1-209ENST00000598570 TCERG1O14776 1098 aaKnown RBP22.61■■□□□ 1.21
USHBP1-209ENST00000598570 ALDH1B1P30837 517 aa22.61■■□□□ 1.21
USHBP1-209ENST00000598570 FER1L6Q2WGJ9 1857 aa22.61■■□□□ 1.21
USHBP1-209ENST00000598570 SYNE4Q8N205 404 aa22.61■■□□□ 1.21
USHBP1-209ENST00000598570 ZNF622Q969S3 477 aaKnown RBP eCLIP22.61■■□□□ 1.21
USHBP1-209ENST00000598570 TRMT112Q9UI30 125 aaKnown RBP22.61■■□□□ 1.21
USHBP1-209ENST00000598570 MAP3K2Q9Y2U5 619 aa22.61■■□□□ 1.21
USHBP1-209ENST00000598570 SNED1Q8TER0 1413 aa22.6■■□□□ 1.21
USHBP1-209ENST00000598570 PRPF40BQ6NWY9 871 aaKnown RBP22.6■■□□□ 1.21
USHBP1-209ENST00000598570 ZBTB38Q8NAP3 1195 aaPredicted RBP22.6■■□□□ 1.21
USHBP1-209ENST00000598570 NLRP3Q96P20 1036 aa22.6■■□□□ 1.21
USHBP1-209ENST00000598570 DDX60Q8IY21 1712 aaKnown RBP22.6■■□□□ 1.21
USHBP1-209ENST00000598570 LTBP3Q9NS15 1303 aa22.59■■□□□ 1.21
USHBP1-209ENST00000598570 LAMB2P55268 1798 aa22.59■■□□□ 1.21
USHBP1-209ENST00000598570 ARHGAP27Q6ZUM4 889 aa22.59■■□□□ 1.21
USHBP1-209ENST00000598570 PCCAP05165 728 aaPredicted RBP22.58■■□□□ 1.21
USHBP1-209ENST00000598570 BRPF1P55201 1214 aaPredicted RBP22.58■■□□□ 1.21
USHBP1-209ENST00000598570 SF3B3Q15393 1217 aaKnown RBP22.58■■□□□ 1.21
USHBP1-209ENST00000598570 MYD88Q99836 296 aa22.58■■□□□ 1.21
USHBP1-209ENST00000598570 ALDH1L2Q3SY69 923 aa22.57■■□□□ 1.2
USHBP1-209ENST00000598570 SOGA3Q5TF21 947 aa22.57■■□□□ 1.2
USHBP1-209ENST00000598570 FAM89AQ96GI7 184 aa22.57■■□□□ 1.2
USHBP1-209ENST00000598570 NFKBIEO00221 500 aa22.56■■□□□ 1.2
USHBP1-209ENST00000598570 PRELPP51888 382 aa22.56■■□□□ 1.2
USHBP1-209ENST00000598570 MRPL50Q8N5N7 158 aaKnown RBP22.56■■□□□ 1.2
USHBP1-209ENST00000598570 CWC25Q9NXE8 425 aaPredicted RBP22.56■■□□□ 1.2
USHBP1-209ENST00000598570 NEURL1BA8MQ27 555 aa22.55■■□□□ 1.2
USHBP1-209ENST00000598570 H7C1W4 665 aa22.55■■□□□ 1.2
USHBP1-209ENST00000598570 C21orf2O43822 256 aa22.55■■□□□ 1.2
USHBP1-209ENST00000598570 HCLS1P14317 486 aaPredicted RBP22.55■■□□□ 1.2
USHBP1-209ENST00000598570 LINS1Q8NG48 757 aa22.55■■□□□ 1.2
USHBP1-209ENST00000598570 DNAAF4Q8WXU2 420 aa22.55■■□□□ 1.2
USHBP1-209ENST00000598570 CDHR2Q9BYE9 1310 aa22.55■■□□□ 1.2
USHBP1-209ENST00000598570 CC2D2BQ6DHV5 1058 aa22.54■■□□□ 1.2
USHBP1-209ENST00000598570 ZNF784Q8NCA9 323 aaPredicted RBP22.54■■□□□ 1.2
USHBP1-209ENST00000598570 SSH1Q8WYL5 1049 aa22.54■■□□□ 1.2
USHBP1-209ENST00000598570 RBM17Q96I25 401 aaKnown RBP22.54■■□□□ 1.2
USHBP1-209ENST00000598570 FKBP5Q13451 457 aaPredicted RBP22.53■■□□□ 1.2
USHBP1-209ENST00000598570 GRIPAP1Q4V328 841 aa22.53■■□□□ 1.2
USHBP1-209ENST00000598570 CACNA1SQ13698 1873 aa22.52■■□□□ 1.2
USHBP1-209ENST00000598570 IRS4O14654 1257 aaPredicted RBP22.52■■□□□ 1.2
USHBP1-209ENST00000598570 BBOX1O75936 387 aa22.52■■□□□ 1.2
USHBP1-209ENST00000598570 HSP90B1P14625 803 aaKnown RBP22.52■■□□□ 1.2
USHBP1-209ENST00000598570 CASP7P55210 303 aa22.52■■□□□ 1.2
USHBP1-209ENST00000598570 NEXNQ0ZGT2 675 aa22.52■■□□□ 1.2
USHBP1-209ENST00000598570 GCKRQ14397 625 aa22.52■■□□□ 1.2
USHBP1-209ENST00000598570 BEND3Q5T5X7 828 aa22.52■■□□□ 1.2
USHBP1-209ENST00000598570 RPGRQ92834 1020 aaKnown RBP22.52■■□□□ 1.2
USHBP1-209ENST00000598570 LMNB1P20700 586 aa22.51■■□□□ 1.19
USHBP1-209ENST00000598570 ZC3H4Q9UPT8 1303 aaKnown RBP22.51■■□□□ 1.19
USHBP1-209ENST00000598570 DICER1Q9UPY3 1922 aaKnown RBP22.51■■□□□ 1.19
USHBP1-209ENST00000598570 CWF19L2Q2TBE0 894 aaKnown RBP22.5■■□□□ 1.19
USHBP1-209ENST00000598570 RTKN2Q8IZC4 609 aa22.5■■□□□ 1.19
USHBP1-209ENST00000598570 PLA2G12BQ9BX93 195 aa22.5■■□□□ 1.19
USHBP1-209ENST00000598570 PTPRCP08575 1304 aa22.5■■□□□ 1.19
USHBP1-209ENST00000598570 ZBED9Q6R2W3 1325 aa22.5■■□□□ 1.19
USHBP1-209ENST00000598570 HNRNPUQ00839 825 aaKnown RBP eCLIP22.49■■□□□ 1.19
USHBP1-209ENST00000598570 CCDC93Q567U6 631 aa22.49■■□□□ 1.19
USHBP1-209ENST00000598570 C9orf131Q5VYM1 1079 aa22.49■■□□□ 1.19
USHBP1-209ENST00000598570 PSMD1Q99460 953 aa22.49■■□□□ 1.19
USHBP1-209ENST00000598570 ATP6V0A2Q9Y487 856 aa22.49■■□□□ 1.19
USHBP1-209ENST00000598570 ABCC4O15439 1325 aa22.49■■□□□ 1.19
USHBP1-209ENST00000598570 CCDC88AQ3V6T2 1871 aa22.48■■□□□ 1.19
USHBP1-209ENST00000598570 PDE8AO60658 829 aa22.48■■□□□ 1.19
USHBP1-209ENST00000598570 F6X3S4 739 aa22.47■■□□□ 1.19
USHBP1-209ENST00000598570 RASSF7Q02833 373 aa22.47■■□□□ 1.19
USHBP1-209ENST00000598570 GRAPQ13588 217 aa22.47■■□□□ 1.19
USHBP1-209ENST00000598570 TMC4Q7Z404 712 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms