RNA–Protein interactions for RNA: ENST00000598352.1

C19orf54-208, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 1 (best)

Gene C19orf54, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-208ENST00000598352 VAMP4O75379 141 aa16.05■□□□□ 0.16
C19orf54-208ENST00000598352 GTF2E1P29083 439 aaPredicted RBP16.05■□□□□ 0.16
C19orf54-208ENST00000598352 TRIM28Q13263 835 aaKnown RBP16.05■□□□□ 0.16
C19orf54-208ENST00000598352 C9orf131Q5VYM1 1079 aa16.05■□□□□ 0.16
C19orf54-208ENST00000598352 PRPF40BQ6NWY9 871 aaKnown RBP16.05■□□□□ 0.16
C19orf54-208ENST00000598352 CHMP4AQ9BY43 222 aa16.05■□□□□ 0.16
C19orf54-208ENST00000598352 SLX4Q8IY92 1834 aa16.04■□□□□ 0.16
C19orf54-208ENST00000598352 C21orf2O43822 256 aa16.04■□□□□ 0.16
C19orf54-208ENST00000598352 HOXA10P31260 410 aaPredicted RBP16.04■□□□□ 0.16
C19orf54-208ENST00000598352 RASSF7Q02833 373 aa16.04■□□□□ 0.16
C19orf54-208ENST00000598352 EXOSC9Q06265 439 aaKnown RBP16.04■□□□□ 0.16
C19orf54-208ENST00000598352 TNRC6CQ9HCJ0 1690 aaKnown RBP16.04■□□□□ 0.16
C19orf54-208ENST00000598352 RNF123Q5XPI4 1314 aa16.03■□□□□ 0.16
C19orf54-208ENST00000598352 ATP5J2-PTCD1G3V325 749 aa16.03■□□□□ 0.16
C19orf54-208ENST00000598352 TCERG1O14776 1098 aaKnown RBP16.03■□□□□ 0.16
C19orf54-208ENST00000598352 GOLGA2Q08379 1002 aa16.02■□□□□ 0.16
C19orf54-208ENST00000598352 DIEXFQ68CQ4 756 aaKnown RBP16.02■□□□□ 0.16
C19orf54-208ENST00000598352 G2E3Q7L622 706 aa16.02■□□□□ 0.16
C19orf54-208ENST00000598352 MIER1Q8N108 512 aa16.02■□□□□ 0.16
C19orf54-208ENST00000598352 ZNF219Q9P2Y4 722 aaPredicted RBP16.02■□□□□ 0.16
C19orf54-208ENST00000598352 HCLS1P14317 486 aaPredicted RBP16.01■□□□□ 0.15
C19orf54-208ENST00000598352 RIC3Q7Z5B4 369 aa16.01■□□□□ 0.15
C19orf54-208ENST00000598352 ZNF428Q96B54 188 aa16.01■□□□□ 0.15
C19orf54-208ENST00000598352 MYH16Q9H6N6 1097 aa16.01■□□□□ 0.15
C19orf54-208ENST00000598352 TRMT112Q9UI30 125 aaKnown RBP16.01■□□□□ 0.15
C19orf54-208ENST00000598352 SH3TC1Q8TE82 1336 aa16■□□□□ 0.15
C19orf54-208ENST00000598352 LTBP3Q9NS15 1303 aa16■□□□□ 0.15
C19orf54-208ENST00000598352 SLC4A2P04920 1241 aa16■□□□□ 0.15
C19orf54-208ENST00000598352 OLFM4Q6UX06 510 aa16■□□□□ 0.15
C19orf54-208ENST00000598352 CRAMP1Q96RY5 1269 aa16■□□□□ 0.15
C19orf54-208ENST00000598352 METTL22Q9BUU2 404 aaPredicted RBP16■□□□□ 0.15
C19orf54-208ENST00000598352 STK31Q9BXU1 1019 aa16■□□□□ 0.15
C19orf54-208ENST00000598352 RNF181Q9P0P0 153 aa16■□□□□ 0.15
C19orf54-208ENST00000598352 ANKRD36CQ5JPF3 1778 aa16■□□□□ 0.15
C19orf54-208ENST00000598352 LMNB1P20700 586 aa15.99■□□□□ 0.15
C19orf54-208ENST00000598352 ALDH1B1P30837 517 aa15.99■□□□□ 0.15
C19orf54-208ENST00000598352 KSR2Q6VAB6 950 aa15.99■□□□□ 0.15
C19orf54-208ENST00000598352 FAM89AQ96GI7 184 aa15.99■□□□□ 0.15
C19orf54-208ENST00000598352 NLRP3Q96P20 1036 aa15.99■□□□□ 0.15
C19orf54-208ENST00000598352 SBF1O95248 1867 aa15.99■□□□□ 0.15
C19orf54-208ENST00000598352 PI4KAP2A4QPH2 592 aa15.98■□□□□ 0.15
C19orf54-208ENST00000598352 IGKV5-2P06315 115 aa15.98■□□□□ 0.15
C19orf54-208ENST00000598352 SLC51AQ86UW1 340 aa15.98■□□□□ 0.15
C19orf54-208ENST00000598352 PI4KAP1Q8N8J0 262 aa15.98■□□□□ 0.15
C19orf54-208ENST00000598352 SNED1Q8TER0 1413 aa15.98■□□□□ 0.15
C19orf54-208ENST00000598352 MYD88Q99836 296 aa15.98■□□□□ 0.15
C19orf54-208ENST00000598352 MAP3K2Q9Y2U5 619 aa15.98■□□□□ 0.15
C19orf54-208ENST00000598352 ARFGEF2Q9Y6D5 1785 aa15.98■□□□□ 0.15
C19orf54-208ENST00000598352 DDX58O95786 925 aaKnown RBP15.97■□□□□ 0.15
C19orf54-208ENST00000598352 SLFN5Q08AF3 891 aa15.97■□□□□ 0.15
C19orf54-208ENST00000598352 FLIIQ13045 1269 aa15.97■□□□□ 0.15
C19orf54-208ENST00000598352 SOGA3Q5TF21 947 aa15.97■□□□□ 0.15
C19orf54-208ENST00000598352 RPGRQ92834 1020 aaKnown RBP15.97■□□□□ 0.15
C19orf54-208ENST00000598352 RBM17Q96I25 401 aaKnown RBP15.97■□□□□ 0.15
C19orf54-208ENST00000598352 FER1L6Q2WGJ9 1857 aa15.97■□□□□ 0.15
C19orf54-208ENST00000598352 E9PSI1 815 aa15.96■□□□□ 0.15
C19orf54-208ENST00000598352 CCDC93Q567U6 631 aa15.96■□□□□ 0.15
C19orf54-208ENST00000598352 TRMT2AQ8IZ69 625 aaKnown RBP15.96■□□□□ 0.15
C19orf54-208ENST00000598352 ZBTB38Q8NAP3 1195 aaPredicted RBP15.96■□□□□ 0.15
C19orf54-208ENST00000598352 CCDC191Q8NCU4 936 aa15.96■□□□□ 0.15
C19orf54-208ENST00000598352 ZNF526Q8TF50 670 aaPredicted RBP15.96■□□□□ 0.15
C19orf54-208ENST00000598352 PCCAP05165 728 aaPredicted RBP15.95■□□□□ 0.14
C19orf54-208ENST00000598352 SF3B3Q15393 1217 aaKnown RBP15.95■□□□□ 0.14
C19orf54-208ENST00000598352 CDCA7LQ96GN5 454 aa15.95■□□□□ 0.14
C19orf54-208ENST00000598352 TAOK3Q9H2K8 898 aa15.95■□□□□ 0.14
C19orf54-208ENST00000598352 GPBP1L1Q9HC44 474 aaPredicted RBP15.95■□□□□ 0.14
C19orf54-208ENST00000598352 ABCC4O15439 1325 aa15.94■□□□□ 0.14
C19orf54-208ENST00000598352 ZC3H4Q9UPT8 1303 aaKnown RBP15.94■□□□□ 0.14
C19orf54-208ENST00000598352 IRS4O14654 1257 aaPredicted RBP15.94■□□□□ 0.14
C19orf54-208ENST00000598352 FKBP4Q02790 459 aaKnown RBP eCLIP15.94■□□□□ 0.14
C19orf54-208ENST00000598352 RTL5Q5HYW3 569 aaPredicted RBP15.94■□□□□ 0.14
C19orf54-208ENST00000598352 RTKN2Q8IZC4 609 aa15.94■□□□□ 0.14
C19orf54-208ENST00000598352 CWC25Q9NXE8 425 aaPredicted RBP15.94■□□□□ 0.14
C19orf54-208ENST00000598352 KIF3CO14782 793 aa15.93■□□□□ 0.14
C19orf54-208ENST00000598352 CC2D2BQ6DHV5 1058 aa15.93■□□□□ 0.14
C19orf54-208ENST00000598352 JARID2Q92833 1246 aaPredicted RBP15.93■□□□□ 0.14
C19orf54-208ENST00000598352 NEURL1BA8MQ27 555 aa15.92■□□□□ 0.14
C19orf54-208ENST00000598352 PPEF1O14829 653 aaPredicted RBP15.92■□□□□ 0.14
C19orf54-208ENST00000598352 BBOX1O75936 387 aa15.92■□□□□ 0.14
C19orf54-208ENST00000598352 CWF19L2Q2TBE0 894 aaKnown RBP15.92■□□□□ 0.14
C19orf54-208ENST00000598352 DNAAF4Q8WXU2 420 aa15.92■□□□□ 0.14
C19orf54-208ENST00000598352 NMRK2Q9NPI5 230 aa15.92■□□□□ 0.14
C19orf54-208ENST00000598352 ZNF277Q9NRM2 450 aaPredicted RBP15.92■□□□□ 0.14
C19orf54-208ENST00000598352 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
C19orf54-208ENST00000598352 CACNA1SQ13698 1873 aa15.92■□□□□ 0.14
C19orf54-208ENST00000598352 DDX60Q8IY21 1712 aaKnown RBP15.91■□□□□ 0.14
C19orf54-208ENST00000598352 LAMB2P55268 1798 aa15.91■□□□□ 0.14
C19orf54-208ENST00000598352 FKBP5Q13451 457 aaPredicted RBP15.91■□□□□ 0.14
C19orf54-208ENST00000598352 GRAPQ13588 217 aa15.91■□□□□ 0.14
C19orf54-208ENST00000598352 DDX46Q7L014 1031 aaKnown RBP15.91■□□□□ 0.14
C19orf54-208ENST00000598352 GRAPLQ8TC17 118 aaPredicted RBP15.91■□□□□ 0.14
C19orf54-208ENST00000598352 PSMD1Q99460 953 aa15.91■□□□□ 0.14
C19orf54-208ENST00000598352 CACNA1FO60840 1977 aa15.91■□□□□ 0.14
C19orf54-208ENST00000598352 GLTPD2A6NH11 291 aa15.9■□□□□ 0.14
C19orf54-208ENST00000598352 H7C1W4 665 aa15.9■□□□□ 0.14
C19orf54-208ENST00000598352 CDHR2Q9BYE9 1310 aa15.9■□□□□ 0.14
C19orf54-208ENST00000598352 F6X3S4 739 aa15.89■□□□□ 0.13
C19orf54-208ENST00000598352 CASP7P55210 303 aa15.89■□□□□ 0.13
C19orf54-208ENST00000598352 C1QTNF8P60827 252 aa15.89■□□□□ 0.13
C19orf54-208ENST00000598352 NEXNQ0ZGT2 675 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms