RNA–Protein interactions for RNA: ENST00000597740.1

CAPN12-208, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-208ENST00000597740 SYNE4Q8N205 404 aa21.61■■□□□ 1.05
CAPN12-208ENST00000597740 NIP7Q9Y221 180 aaKnown RBP eCLIP21.61■■□□□ 1.05
CAPN12-208ENST00000597740 CEMIPQ8WUJ3 1361 aa21.61■■□□□ 1.05
CAPN12-208ENST00000597740 TMPOP42166 694 aaKnown RBP21.6■■□□□ 1.05
CAPN12-208ENST00000597740 NFE2L2Q16236 605 aa21.6■■□□□ 1.05
CAPN12-208ENST00000597740 DLG5Q8TDM6 1919 aa21.59■■□□□ 1.05
CAPN12-208ENST00000597740 PAXIP1Q6ZW49 1069 aaPredicted RBP21.59■■□□□ 1.05
CAPN12-208ENST00000597740 GJA3Q9Y6H8 435 aa21.59■■□□□ 1.05
CAPN12-208ENST00000597740 GRM1Q13255 1194 aa21.58■■□□□ 1.05
CAPN12-208ENST00000597740 NCBP3Q53F19 620 aaKnown RBP21.58■■□□□ 1.05
CAPN12-208ENST00000597740 JDP2Q8WYK2 163 aa21.58■■□□□ 1.05
CAPN12-208ENST00000597740 DDX21Q9NR30 783 aaKnown RBP eCLIP21.58■■□□□ 1.05
CAPN12-208ENST00000597740 GTF2E1P29083 439 aaPredicted RBP21.57■■□□□ 1.04
CAPN12-208ENST00000597740 ALDH1B1P30837 517 aa21.57■■□□□ 1.04
CAPN12-208ENST00000597740 RRP7AQ9Y3A4 280 aaKnown RBP21.57■■□□□ 1.04
CAPN12-208ENST00000597740 CCDC85CA6NKD9 419 aa21.56■■□□□ 1.04
CAPN12-208ENST00000597740 SNRPA1P09661 255 aaKnown RBP21.56■■□□□ 1.04
CAPN12-208ENST00000597740 HNRNPUQ00839 825 aaKnown RBP eCLIP21.56■■□□□ 1.04
CAPN12-208ENST00000597740 FMR1Q06787 632 aaKnown RBP eCLIP21.56■■□□□ 1.04
CAPN12-208ENST00000597740 NGEFQ8N5V2 710 aa21.56■■□□□ 1.04
CAPN12-208ENST00000597740 CAPNS2Q96L46 248 aa21.56■■□□□ 1.04
CAPN12-208ENST00000597740 BEGAINQ9BUH8 593 aa21.56■■□□□ 1.04
CAPN12-208ENST00000597740 LMOD1P29536 600 aaPredicted RBP21.55■■□□□ 1.04
CAPN12-208ENST00000597740 EIF6P56537 245 aaKnown RBP21.55■■□□□ 1.04
CAPN12-208ENST00000597740 RIPK4P57078 832 aa21.55■■□□□ 1.04
CAPN12-208ENST00000597740 NBPF26B4DH59 902 aa21.54■■□□□ 1.04
CAPN12-208ENST00000597740 NEUROD2Q15784 382 aa21.54■■□□□ 1.04
CAPN12-208ENST00000597740 CYP4F22Q6NT55 531 aa21.54■■□□□ 1.04
CAPN12-208ENST00000597740 NBPF10Q6P3W6 841 aaKnown RBP21.54■■□□□ 1.04
CAPN12-208ENST00000597740 NBPF15Q8N660 670 aa21.54■■□□□ 1.04
CAPN12-208ENST00000597740 PSMD1Q99460 953 aa21.54■■□□□ 1.04
CAPN12-208ENST00000597740 ECE1P42892 770 aa21.53■■□□□ 1.04
CAPN12-208ENST00000597740 MLLT1Q03111 559 aaPredicted RBP21.53■■□□□ 1.04
CAPN12-208ENST00000597740 HLFQ16534 295 aa21.53■■□□□ 1.04
CAPN12-208ENST00000597740 TRIM35Q9UPQ4 493 aa21.53■■□□□ 1.04
CAPN12-208ENST00000597740 SNED1Q8TER0 1413 aa21.53■■□□□ 1.04
CAPN12-208ENST00000597740 COL4A5P29400 1685 aa21.53■■□□□ 1.04
CAPN12-208ENST00000597740 THSD7BQ9C0I4 1608 aa21.52■■□□□ 1.04
CAPN12-208ENST00000597740 RGL2O15211 777 aa21.52■■□□□ 1.04
CAPN12-208ENST00000597740 EPS15P42566 896 aa21.52■■□□□ 1.04
CAPN12-208ENST00000597740 CCDC27Q2M243 656 aa21.52■■□□□ 1.04
CAPN12-208ENST00000597740 GPR101Q96P66 508 aaPredicted RBP21.52■■□□□ 1.04
CAPN12-208ENST00000597740 LTBP1Q14766 1721 aa21.52■■□□□ 1.03
CAPN12-208ENST00000597740 ABCC12Q96J65 1359 aa21.51■■□□□ 1.03
CAPN12-208ENST00000597740 HTATSF1O43719 755 aaKnown RBP21.51■■□□□ 1.03
CAPN12-208ENST00000597740 SCNN1DP51172 638 aa21.51■■□□□ 1.03
CAPN12-208ENST00000597740 MCM10Q7L590 875 aa21.51■■□□□ 1.03
CAPN12-208ENST00000597740 TSKSQ9UJT2 592 aa21.51■■□□□ 1.03
CAPN12-208ENST00000597740 SALL2Q9Y467 1007 aaPredicted RBP21.51■■□□□ 1.03
CAPN12-208ENST00000597740 TRAF5O00463 557 aa21.5■■□□□ 1.03
CAPN12-208ENST00000597740 NUTM1Q86Y26 1132 aa21.5■■□□□ 1.03
CAPN12-208ENST00000597740 LARGE2Q8N3Y3 721 aa21.5■■□□□ 1.03
CAPN12-208ENST00000597740 RTF1Q92541 710 aaKnown RBP21.5■■□□□ 1.03
CAPN12-208ENST00000597740 YTHDC1Q96MU7 727 aaKnown RBP21.5■■□□□ 1.03
CAPN12-208ENST00000597740 LMOD3Q0VAK6 560 aa21.49■■□□□ 1.03
CAPN12-208ENST00000597740 CRY2Q49AN0 593 aa21.49■■□□□ 1.03
CAPN12-208ENST00000597740 CST9Q5W186 159 aa21.49■■□□□ 1.03
CAPN12-208ENST00000597740 CC2D2BQ6DHV5 1058 aa21.49■■□□□ 1.03
CAPN12-208ENST00000597740 WWC1Q8IX03 1113 aa21.48■■□□□ 1.03
CAPN12-208ENST00000597740 RPGRQ92834 1020 aaKnown RBP21.48■■□□□ 1.03
CAPN12-208ENST00000597740 NYXQ9GZU5 481 aa21.48■■□□□ 1.03
CAPN12-208ENST00000597740 ZNF521Q96K83 1311 aa21.48■■□□□ 1.03
CAPN12-208ENST00000597740 USP50Q70EL3 339 aaPredicted RBP21.47■■□□□ 1.03
CAPN12-208ENST00000597740 TLL2Q9Y6L7 1015 aa21.47■■□□□ 1.03
CAPN12-208ENST00000597740 ZBED9Q6R2W3 1325 aa21.47■■□□□ 1.03
CAPN12-208ENST00000597740 TCERG1O14776 1098 aaKnown RBP21.46■■□□□ 1.03
CAPN12-208ENST00000597740 AOC2O75106 756 aa21.46■■□□□ 1.03
CAPN12-208ENST00000597740 RGS19P49795 217 aa21.46■■□□□ 1.03
CAPN12-208ENST00000597740 DCTN1Q14203 1278 aa21.46■■□□□ 1.03
CAPN12-208ENST00000597740 SLC51AQ86UW1 340 aa21.46■■□□□ 1.03
CAPN12-208ENST00000597740 CFAP44Q96MT7 982 aa21.46■■□□□ 1.03
CAPN12-208ENST00000597740 MAP2K2P36507 400 aa21.44■■□□□ 1.02
CAPN12-208ENST00000597740 WDR63Q8IWG1 891 aa21.44■■□□□ 1.02
CAPN12-208ENST00000597740 NIM1KQ8IY84 436 aa21.44■■□□□ 1.02
CAPN12-208ENST00000597740 PPEF1O14829 653 aaPredicted RBP21.43■■□□□ 1.02
CAPN12-208ENST00000597740 GPTP24298 496 aa21.43■■□□□ 1.02
CAPN12-208ENST00000597740 HOXA10P31260 410 aaPredicted RBP21.43■■□□□ 1.02
CAPN12-208ENST00000597740 GRIPAP1Q4V328 841 aa21.43■■□□□ 1.02
CAPN12-208ENST00000597740 TRPM7Q96QT4 1865 aa21.43■■□□□ 1.02
CAPN12-208ENST00000597740 PPIP5K2O43314 1243 aa21.42■■□□□ 1.02
CAPN12-208ENST00000597740 RBM17Q96I25 401 aaKnown RBP21.42■■□□□ 1.02
CAPN12-208ENST00000597740 THUMPD2Q9BTF0 503 aaKnown RBP21.42■■□□□ 1.02
CAPN12-208ENST00000597740 ADARB2Q9NS39 739 aaKnown RBP21.42■■□□□ 1.02
CAPN12-208ENST00000597740 MAP3K15Q6ZN16 1313 aa21.41■■□□□ 1.02
CAPN12-208ENST00000597740 ERVV-1B6SEH8 477 aa21.41■■□□□ 1.02
CAPN12-208ENST00000597740 CELF2O95319 508 aaKnown RBP21.41■■□□□ 1.02
CAPN12-208ENST00000597740 SAPCD2Q86UD0 394 aa21.41■■□□□ 1.02
CAPN12-208ENST00000597740 MCOLN1Q9GZU1 580 aa21.41■■□□□ 1.02
CAPN12-208ENST00000597740 MIS18AQ9NYP9 233 aa21.41■■□□□ 1.02
CAPN12-208ENST00000597740 GPRC5DQ9NZD1 345 aa21.41■■□□□ 1.02
CAPN12-208ENST00000597740 RIC1Q4ADV7 1423 aa21.4■■□□□ 1.02
CAPN12-208ENST00000597740 TAF7Q15545 349 aaPredicted RBP21.4■■□□□ 1.02
CAPN12-208ENST00000597740 AOC3Q16853 763 aa21.4■■□□□ 1.02
CAPN12-208ENST00000597740 KIF6Q6ZMV9 814 aa21.4■■□□□ 1.02
CAPN12-208ENST00000597740 CRAMP1Q96RY5 1269 aa21.4■■□□□ 1.02
CAPN12-208ENST00000597740 LAMB4A4D0S4 1761 aa21.39■■□□□ 1.01
CAPN12-208ENST00000597740 IL16Q14005 1332 aa21.39■■□□□ 1.01
CAPN12-208ENST00000597740 UBN2Q6ZU65 1347 aa21.39■■□□□ 1.01
CAPN12-208ENST00000597740 CA12O43570 354 aa21.39■■□□□ 1.01
CAPN12-208ENST00000597740 CALD1Q05682 793 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms