RNA–Protein interactions for RNA: ENST00000596940.5

C19orf54-206, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-206ENST00000596940 COPS6Q7L5N1 327 aa18.29■□□□□ 0.52
C19orf54-206ENST00000596940 SYNE4Q8N205 404 aa18.29■□□□□ 0.52
C19orf54-206ENST00000596940 L3MBTL3Q96JM7 780 aaPredicted RBP18.29■□□□□ 0.52
C19orf54-206ENST00000596940 TRIM35Q9UPQ4 493 aa18.29■□□□□ 0.52
C19orf54-206ENST00000596940 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
C19orf54-206ENST00000596940 ABCC12Q96J65 1359 aa18.29■□□□□ 0.52
C19orf54-206ENST00000596940 SLX4Q8IY92 1834 aa18.28■□□□□ 0.52
C19orf54-206ENST00000596940 IARSP41252 1262 aaKnown RBP18.28■□□□□ 0.52
C19orf54-206ENST00000596940 AIMP1Q12904 312 aaKnown RBP18.28■□□□□ 0.52
C19orf54-206ENST00000596940 SLC10A5Q5PT55 438 aa18.28■□□□□ 0.52
C19orf54-206ENST00000596940 CHADLQ6NUI6 762 aa18.28■□□□□ 0.52
C19orf54-206ENST00000596940 XAGE3Q8WTP9 111 aa18.28■□□□□ 0.52
C19orf54-206ENST00000596940 CFAP44Q96MT7 982 aa18.28■□□□□ 0.52
C19orf54-206ENST00000596940 PROSER3Q2NL68 480 aa18.27■□□□□ 0.52
C19orf54-206ENST00000596940 NECTIN2Q92692 538 aa18.27■□□□□ 0.52
C19orf54-206ENST00000596940 DBF4Q9UBU7 674 aaPredicted RBP18.27■□□□□ 0.52
C19orf54-206ENST00000596940 FER1L6Q2WGJ9 1857 aa18.26■□□□□ 0.51
C19orf54-206ENST00000596940 ANXA1P04083 346 aa18.26■□□□□ 0.51
C19orf54-206ENST00000596940 TCIRG1Q13488 830 aa18.26■□□□□ 0.51
C19orf54-206ENST00000596940 HDGFL1Q5TGJ6 251 aa18.26■□□□□ 0.51
C19orf54-206ENST00000596940 OLFM4Q6UX06 510 aa18.26■□□□□ 0.51
C19orf54-206ENST00000596940 CHMP4AQ9BY43 222 aa18.26■□□□□ 0.51
C19orf54-206ENST00000596940 FZD9O00144 591 aa18.25■□□□□ 0.51
C19orf54-206ENST00000596940 PPEF1O14829 653 aaPredicted RBP18.25■□□□□ 0.51
C19orf54-206ENST00000596940 HTRA3P83110 453 aa18.25■□□□□ 0.51
C19orf54-206ENST00000596940 JMYQ8N9B5 988 aa18.25■□□□□ 0.51
C19orf54-206ENST00000596940 WDR90Q96KV7 1748 aa18.24■□□□□ 0.51
C19orf54-206ENST00000596940 BBOX1O75936 387 aa18.24■□□□□ 0.51
C19orf54-206ENST00000596940 EIF6P56537 245 aaKnown RBP18.24■□□□□ 0.51
C19orf54-206ENST00000596940 IFFO2Q5TF58 517 aa18.24■□□□□ 0.51
C19orf54-206ENST00000596940 PNMA8AQ86V59 439 aaPredicted RBP18.24■□□□□ 0.51
C19orf54-206ENST00000596940 NLRP10Q86W26 655 aa18.24■□□□□ 0.51
C19orf54-206ENST00000596940 LDHDQ86WU2 507 aa18.24■□□□□ 0.51
C19orf54-206ENST00000596940 GPC2Q8N158 579 aa18.24■□□□□ 0.51
C19orf54-206ENST00000596940 VPS33BQ9H267 617 aa18.24■□□□□ 0.51
C19orf54-206ENST00000596940 TAF1DQ9H5J8 278 aaPredicted RBP18.24■□□□□ 0.51
C19orf54-206ENST00000596940 HYPKQ9NX55 129 aa18.24■□□□□ 0.51
C19orf54-206ENST00000596940 TRMT112Q9UI30 125 aaKnown RBP18.24■□□□□ 0.51
C19orf54-206ENST00000596940 HACL1Q9UJ83 578 aa18.24■□□□□ 0.51
C19orf54-206ENST00000596940 TIAM2Q8IVF5 1701 aa18.23■□□□□ 0.51
C19orf54-206ENST00000596940 ANKRD13DQ6ZTN6 518 aa18.23■□□□□ 0.51
C19orf54-206ENST00000596940 PLBD2Q8NHP8 589 aa18.23■□□□□ 0.51
C19orf54-206ENST00000596940 CHPF2Q9P2E5 772 aa18.23■□□□□ 0.51
C19orf54-206ENST00000596940 SH3TC1Q8TE82 1336 aa18.23■□□□□ 0.51
C19orf54-206ENST00000596940 GNAI1P63096 354 aa18.22■□□□□ 0.51
C19orf54-206ENST00000596940 KRT24Q2M2I5 525 aa18.22■□□□□ 0.51
C19orf54-206ENST00000596940 DUSP27Q5VZP5 1158 aa18.22■□□□□ 0.51
C19orf54-206ENST00000596940 LARGE2Q8N3Y3 721 aa18.22■□□□□ 0.51
C19orf54-206ENST00000596940 SUPT20HQ8NEM7 779 aa18.22■□□□□ 0.51
C19orf54-206ENST00000596940 IFT57Q9NWB7 429 aa18.22■□□□□ 0.51
C19orf54-206ENST00000596940 ATP6V0A2Q9Y487 856 aa18.22■□□□□ 0.51
C19orf54-206ENST00000596940 ARFGEF2Q9Y6D5 1785 aa18.22■□□□□ 0.51
C19orf54-206ENST00000596940 ZNF541Q9H0D2 1346 aa18.22■□□□□ 0.51
C19orf54-206ENST00000596940 APAF1O14727 1248 aa18.21■□□□□ 0.51
C19orf54-206ENST00000596940 DDX46Q7L014 1031 aaKnown RBP18.21■□□□□ 0.51
C19orf54-206ENST00000596940 TCERG1O14776 1098 aaKnown RBP18.2■□□□□ 0.5
C19orf54-206ENST00000596940 EPHX2P34913 555 aa18.2■□□□□ 0.5
C19orf54-206ENST00000596940 ZEB1P37275 1124 aaPredicted RBP18.2■□□□□ 0.5
C19orf54-206ENST00000596940 C3orf67Q6ZVT6 689 aa18.2■□□□□ 0.5
C19orf54-206ENST00000596940 CREBZFQ9NS37 354 aa18.2■□□□□ 0.5
C19orf54-206ENST00000596940 MBIPQ9NS73 344 aa18.2■□□□□ 0.5
C19orf54-206ENST00000596940 DICER1Q9UPY3 1922 aaKnown RBP18.19■□□□□ 0.5
C19orf54-206ENST00000596940 NUP98P52948 1817 aa18.19■□□□□ 0.5
C19orf54-206ENST00000596940 ZNF853P0CG23 659 aa18.19■□□□□ 0.5
C19orf54-206ENST00000596940 HCLS1P14317 486 aaPredicted RBP18.19■□□□□ 0.5
C19orf54-206ENST00000596940 HSP90B1P14625 803 aaKnown RBP18.19■□□□□ 0.5
C19orf54-206ENST00000596940 LMOD1P29536 600 aaPredicted RBP18.19■□□□□ 0.5
C19orf54-206ENST00000596940 CCDC88AQ3V6T2 1871 aa18.19■□□□□ 0.5
C19orf54-206ENST00000596940 EAPPQ56P03 285 aaPredicted RBP18.19■□□□□ 0.5
C19orf54-206ENST00000596940 TMC4Q7Z404 712 aa18.19■□□□□ 0.5
C19orf54-206ENST00000596940 SP8Q8IXZ3 490 aa18.19■□□□□ 0.5
C19orf54-206ENST00000596940 NIM1KQ8IY84 436 aa18.19■□□□□ 0.5
C19orf54-206ENST00000596940 CLEC11AQ9Y240 323 aa18.19■□□□□ 0.5
C19orf54-206ENST00000596940 SNED1Q8TER0 1413 aa18.18■□□□□ 0.5
C19orf54-206ENST00000596940 ABCC4O15439 1325 aa18.18■□□□□ 0.5
C19orf54-206ENST00000596940 PPIP5K2O43314 1243 aa18.17■□□□□ 0.5
C19orf54-206ENST00000596940 POTEIP0CG38 1075 aa18.17■□□□□ 0.5
C19orf54-206ENST00000596940 POTEJP0CG39 1038 aa18.17■□□□□ 0.5
C19orf54-206ENST00000596940 GOLGA2Q08379 1002 aa18.17■□□□□ 0.5
C19orf54-206ENST00000596940 DPP8Q6V1X1 898 aaPredicted RBP18.17■□□□□ 0.5
C19orf54-206ENST00000596940 MPNDQ8N594 471 aa18.17■□□□□ 0.5
C19orf54-206ENST00000596940 GJA3Q9Y6H8 435 aa18.17■□□□□ 0.5
C19orf54-206ENST00000596940 TRIM28Q13263 835 aaKnown RBP18.16■□□□□ 0.5
C19orf54-206ENST00000596940 GRAPQ13588 217 aa18.16■□□□□ 0.5
C19orf54-206ENST00000596940 RIC3Q7Z5B4 369 aa18.16■□□□□ 0.5
C19orf54-206ENST00000596940 GRAPLQ8TC17 118 aaPredicted RBP18.16■□□□□ 0.5
C19orf54-206ENST00000596940 ISCA1Q9BUE6 129 aa18.16■□□□□ 0.5
C19orf54-206ENST00000596940 RTFDC1Q9BY42 306 aaPredicted RBP18.16■□□□□ 0.5
C19orf54-206ENST00000596940 ZNRF3Q9ULT6 936 aa18.14■□□□□ 0.49
C19orf54-206ENST00000596940 TMEM88BA6NKF7 163 aa18.13■□□□□ 0.49
C19orf54-206ENST00000596940 ATP5J2-PTCD1G3V325 749 aa18.13■□□□□ 0.49
C19orf54-206ENST00000596940 DDX58O95786 925 aaKnown RBP18.13■□□□□ 0.49
C19orf54-206ENST00000596940 SF3B3Q15393 1217 aaKnown RBP18.13■□□□□ 0.49
C19orf54-206ENST00000596940 AOC3Q16853 763 aa18.13■□□□□ 0.49
C19orf54-206ENST00000596940 CCDC30Q5VVM6 783 aa18.13■□□□□ 0.49
C19orf54-206ENST00000596940 CNTROBQ8N137 903 aa18.13■□□□□ 0.49
C19orf54-206ENST00000596940 FAM89AQ96GI7 184 aa18.13■□□□□ 0.49
C19orf54-206ENST00000596940 PASKQ96RG2 1323 aa18.13■□□□□ 0.49
C19orf54-206ENST00000596940 CACNA1SQ13698 1873 aa18.13■□□□□ 0.49
C19orf54-206ENST00000596940 SCN4AP35499 1836 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms