RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 HLFQ16534 295 aa11.02□□□□□ -0.65
SNRPA-202ENST00000596860 PPP1R42Q7Z4L9 355 aa11.02□□□□□ -0.65
SNRPA-202ENST00000596860 NLRP10Q86W26 655 aa11.02□□□□□ -0.65
SNRPA-202ENST00000596860 NLGN1Q8N2Q7 840 aa11.02□□□□□ -0.65
SNRPA-202ENST00000596860 ZBTB38Q8NAP3 1195 aaPredicted RBP11.02□□□□□ -0.65
SNRPA-202ENST00000596860 EXOC6Q8TAG9 804 aa11.02□□□□□ -0.65
SNRPA-202ENST00000596860 NYXQ9GZU5 481 aa11.02□□□□□ -0.65
SNRPA-202ENST00000596860 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.65
SNRPA-202ENST00000596860 C9orf78Q9NZ63 289 aaPredicted RBP11.02□□□□□ -0.65
SNRPA-202ENST00000596860 PNPLA7Q6ZV29 1317 aa11.02□□□□□ -0.65
SNRPA-202ENST00000596860 NRXN2Q9P2S2 1712 aa11.01□□□□□ -0.65
SNRPA-202ENST00000596860 GNAI2P04899 355 aa11.01□□□□□ -0.65
SNRPA-202ENST00000596860 UBTFL1P0CB47 393 aaPredicted RBP11.01□□□□□ -0.65
SNRPA-202ENST00000596860 GYS1P13807 737 aa11.01□□□□□ -0.65
SNRPA-202ENST00000596860 CASP7P55210 303 aa11.01□□□□□ -0.65
SNRPA-202ENST00000596860 MTX1Q13505 466 aa11.01□□□□□ -0.65
SNRPA-202ENST00000596860 USPL1Q5W0Q7 1092 aa11.01□□□□□ -0.65
SNRPA-202ENST00000596860 AMIGO3Q86WK7 504 aa11.01□□□□□ -0.65
SNRPA-202ENST00000596860 RPAP2Q8IXW5 612 aaPredicted RBP11.01□□□□□ -0.65
SNRPA-202ENST00000596860 ANO8Q9HCE9 1232 aaPredicted RBP11.01□□□□□ -0.65
SNRPA-202ENST00000596860 PPP4R2Q9NY27 417 aa11.01□□□□□ -0.65
SNRPA-202ENST00000596860 CARMIL3Q8ND23 1372 aa11.01□□□□□ -0.65
SNRPA-202ENST00000596860 CASZ1Q86V15 1759 aa11□□□□□ -0.65
SNRPA-202ENST00000596860 CWF19L2Q2TBE0 894 aaKnown RBP11□□□□□ -0.65
SNRPA-202ENST00000596860 COL23A1Q86Y22 540 aaPredicted RBP11□□□□□ -0.65
SNRPA-202ENST00000596860 SETDB2Q96T68 719 aa11□□□□□ -0.65
SNRPA-202ENST00000596860 MEIS3Q99687 375 aa11□□□□□ -0.65
SNRPA-202ENST00000596860 NIP7Q9Y221 180 aaKnown RBP eCLIP11□□□□□ -0.65
SNRPA-202ENST00000596860 ATP5J2-PTCD1G3V325 749 aa10.99□□□□□ -0.65
SNRPA-202ENST00000596860 NTSR2O95665 410 aa10.99□□□□□ -0.65
SNRPA-202ENST00000596860 TM4SF1P30408 202 aa10.99□□□□□ -0.65
SNRPA-202ENST00000596860 HDAC1Q13547 482 aaPredicted RBP10.99□□□□□ -0.65
SNRPA-202ENST00000596860 RABL6Q3YEC7 729 aaPredicted RBP10.99□□□□□ -0.65
SNRPA-202ENST00000596860 SLC10A5Q5PT55 438 aa10.99□□□□□ -0.65
SNRPA-202ENST00000596860 ARXQ96QS3 562 aa10.99□□□□□ -0.65
SNRPA-202ENST00000596860 UTP14AQ9BVJ6 771 aaKnown RBP10.99□□□□□ -0.65
SNRPA-202ENST00000596860 SPON1Q9HCB6 807 aa10.99□□□□□ -0.65
SNRPA-202ENST00000596860 UBN2Q6ZU65 1347 aa10.99□□□□□ -0.65
SNRPA-202ENST00000596860 SH3TC1Q8TE82 1336 aa10.99□□□□□ -0.65
SNRPA-202ENST00000596860 DDX60Q8IY21 1712 aaKnown RBP10.98□□□□□ -0.65
SNRPA-202ENST00000596860 DCAF8L1A6NGE4 600 aa10.98□□□□□ -0.65
SNRPA-202ENST00000596860 HMMRO75330 724 aa10.98□□□□□ -0.65
SNRPA-202ENST00000596860 PHF14O94880 888 aa10.98□□□□□ -0.65
SNRPA-202ENST00000596860 NBPF7P0C2Y1 421 aaPredicted RBP10.98□□□□□ -0.65
SNRPA-202ENST00000596860 TBC1D9BQ66K14 1250 aa10.98□□□□□ -0.65
SNRPA-202ENST00000596860 TPTE2Q6XPS3 522 aa10.98□□□□□ -0.65
SNRPA-202ENST00000596860 ANKRD44Q8N8A2 993 aa10.98□□□□□ -0.65
SNRPA-202ENST00000596860 SRP68Q9UHB9 627 aaKnown RBP10.98□□□□□ -0.65
SNRPA-202ENST00000596860 RTL9Q8NET4 1388 aa10.98□□□□□ -0.65
SNRPA-202ENST00000596860 IRX6P78412 446 aaPredicted RBP10.97□□□□□ -0.65
SNRPA-202ENST00000596860 NFIXQ14938 502 aa10.97□□□□□ -0.65
SNRPA-202ENST00000596860 SUSD4Q5VX71 490 aa10.97□□□□□ -0.65
SNRPA-202ENST00000596860 UBE3BQ7Z3V4 1068 aa10.97□□□□□ -0.65
SNRPA-202ENST00000596860 TRMT112Q9UI30 125 aaKnown RBP10.97□□□□□ -0.65
SNRPA-202ENST00000596860 PDE8AO60658 829 aa10.96□□□□□ -0.65
SNRPA-202ENST00000596860 GPTP24298 496 aa10.96□□□□□ -0.65
SNRPA-202ENST00000596860 ATP8B2P98198 1209 aa10.96□□□□□ -0.65
SNRPA-202ENST00000596860 CEP85Q6P2H3 762 aa10.96□□□□□ -0.65
SNRPA-202ENST00000596860 RWDD1Q9H446 243 aaPredicted RBP10.96□□□□□ -0.65
SNRPA-202ENST00000596860 FBXO3Q9UK99 471 aa10.96□□□□□ -0.65
SNRPA-202ENST00000596860 PDZRN3Q9UPQ7 1066 aa10.96□□□□□ -0.65
SNRPA-202ENST00000596860 GTF3C3Q9Y5Q9 886 aa10.96□□□□□ -0.65
SNRPA-202ENST00000596860 LRRFIP2Q9Y608 721 aaKnown RBP10.96□□□□□ -0.65
SNRPA-202ENST00000596860 POLRMTO00411 1230 aaKnown RBP10.95□□□□□ -0.66
SNRPA-202ENST00000596860 IRS4O14654 1257 aaPredicted RBP10.95□□□□□ -0.66
SNRPA-202ENST00000596860 CSF1RP07333 972 aa10.95□□□□□ -0.66
SNRPA-202ENST00000596860 POLA2Q14181 598 aa10.95□□□□□ -0.66
SNRPA-202ENST00000596860 NBPF5PQ86XG9 351 aaPredicted RBP10.95□□□□□ -0.66
SNRPA-202ENST00000596860 SSH3Q8TE77 659 aa10.95□□□□□ -0.66
SNRPA-202ENST00000596860 KAZALD1Q96I82 304 aa10.95□□□□□ -0.66
SNRPA-202ENST00000596860 SUCLG2Q96I99 432 aa10.95□□□□□ -0.66
SNRPA-202ENST00000596860 PCDHB15Q9Y5E8 787 aa10.95□□□□□ -0.66
SNRPA-202ENST00000596860 KIF13BQ9NQT8 1826 aa10.94□□□□□ -0.66
SNRPA-202ENST00000596860 SERPINB2P05120 415 aa10.94□□□□□ -0.66
SNRPA-202ENST00000596860 SF3B3Q15393 1217 aaKnown RBP10.94□□□□□ -0.66
SNRPA-202ENST00000596860 CNBD1Q8NA66 436 aa10.94□□□□□ -0.66
SNRPA-202ENST00000596860 GCC1Q96CN9 775 aa10.94□□□□□ -0.66
SNRPA-202ENST00000596860 FAM89AQ96GI7 184 aa10.94□□□□□ -0.66
SNRPA-202ENST00000596860 CHD4Q14839 1912 aa10.94□□□□□ -0.66
SNRPA-202ENST00000596860 KLRG2A4D1S0 409 aaPredicted RBP10.93□□□□□ -0.66
SNRPA-202ENST00000596860 CTSWP56202 376 aa10.93□□□□□ -0.66
SNRPA-202ENST00000596860 ST5P78524 1137 aa10.93□□□□□ -0.66
SNRPA-202ENST00000596860 FOXO4P98177 505 aa10.93□□□□□ -0.66
SNRPA-202ENST00000596860 HSP90AB4PQ58FF6 505 aa10.93□□□□□ -0.66
SNRPA-202ENST00000596860 SMIM5Q71RC9 77 aa10.93□□□□□ -0.66
SNRPA-202ENST00000596860 CENPQQ7L2Z9 268 aaPredicted RBP10.93□□□□□ -0.66
SNRPA-202ENST00000596860 CCDC136Q96JN2 1154 aa10.93□□□□□ -0.66
SNRPA-202ENST00000596860 MTFR1LQ9H019 292 aa10.93□□□□□ -0.66
SNRPA-202ENST00000596860 BICC1Q9H694 974 aaKnown RBP10.93□□□□□ -0.66
SNRPA-202ENST00000596860 DCTPP1Q9H773 170 aa10.93□□□□□ -0.66
SNRPA-202ENST00000596860 COPRSQ9NQ92 184 aa10.93□□□□□ -0.66
SNRPA-202ENST00000596860 PPP1R1BQ9UD71 204 aaPredicted RBP10.93□□□□□ -0.66
SNRPA-202ENST00000596860 NOP58Q9Y2X3 529 aaKnown RBP10.93□□□□□ -0.66
SNRPA-202ENST00000596860 PARP3Q9Y6F1 533 aa10.93□□□□□ -0.66
SNRPA-202ENST00000596860 KDM2BQ8NHM5 1336 aa10.92□□□□□ -0.66
SNRPA-202ENST00000596860 YY1P25490 414 aa10.92□□□□□ -0.66
SNRPA-202ENST00000596860 GTF2E1P29083 439 aaPredicted RBP10.92□□□□□ -0.66
SNRPA-202ENST00000596860 DDR1Q08345 913 aa10.92□□□□□ -0.66
SNRPA-202ENST00000596860 CCDC152Q4G0S7 254 aa10.92□□□□□ -0.66
SNRPA-202ENST00000596860 PRR5LQ6MZQ0 368 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms