RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 PPP1R42Q7Z4L9 355 aa19.72■□□□□ 0.75
USE1-206ENST00000595101 NYXQ9GZU5 481 aa19.72■□□□□ 0.75
USE1-206ENST00000595101 KLRG2A4D1S0 409 aaPredicted RBP19.72■□□□□ 0.75
USE1-206ENST00000595101 RTL5Q5HYW3 569 aaPredicted RBP19.72■□□□□ 0.75
USE1-206ENST00000595101 KSR2Q6VAB6 950 aa19.71■□□□□ 0.75
USE1-206ENST00000595101 TRMT112Q9UI30 125 aaKnown RBP19.71■□□□□ 0.75
USE1-206ENST00000595101 GRIN3BO60391 1043 aa19.7■□□□□ 0.74
USE1-206ENST00000595101 HCLS1P14317 486 aaPredicted RBP19.7■□□□□ 0.74
USE1-206ENST00000595101 JARID2Q92833 1246 aaPredicted RBP19.7■□□□□ 0.74
USE1-206ENST00000595101 FAM89AQ96GI7 184 aa19.7■□□□□ 0.74
USE1-206ENST00000595101 METTL22Q9BUU2 404 aaPredicted RBP19.7■□□□□ 0.74
USE1-206ENST00000595101 DDX58O95786 925 aaKnown RBP19.7■□□□□ 0.74
USE1-206ENST00000595101 IGKV5-2P06315 115 aa19.7■□□□□ 0.74
USE1-206ENST00000595101 TTLL6Q8N841 843 aa19.7■□□□□ 0.74
USE1-206ENST00000595101 BCL2L13Q9BXK5 485 aa19.7■□□□□ 0.74
USE1-206ENST00000595101 ZNF219Q9P2Y4 722 aaPredicted RBP19.7■□□□□ 0.74
USE1-206ENST00000595101 IBTKQ9P2D0 1353 aaPredicted RBP19.69■□□□□ 0.74
USE1-206ENST00000595101 FKBP5Q13451 457 aaPredicted RBP19.69■□□□□ 0.74
USE1-206ENST00000595101 COL11A2P13942 1736 aaPredicted RBP19.69■□□□□ 0.74
USE1-206ENST00000595101 TNRC6CQ9HCJ0 1690 aaKnown RBP19.68■□□□□ 0.74
USE1-206ENST00000595101 F6X3S4 739 aa19.68■□□□□ 0.74
USE1-206ENST00000595101 TRIM28Q13263 835 aaKnown RBP19.68■□□□□ 0.74
USE1-206ENST00000595101 CWF19L2Q2TBE0 894 aaKnown RBP19.68■□□□□ 0.74
USE1-206ENST00000595101 SLC51AQ86UW1 340 aa19.68■□□□□ 0.74
USE1-206ENST00000595101 SSH1Q8WYL5 1049 aa19.68■□□□□ 0.74
USE1-206ENST00000595101 MASTLQ96GX5 879 aa19.68■□□□□ 0.74
USE1-206ENST00000595101 BRCA1P38398 1863 aaKnown RBP19.68■□□□□ 0.74
USE1-206ENST00000595101 CRY2Q49AN0 593 aa19.67■□□□□ 0.74
USE1-206ENST00000595101 ARHGAP27Q6ZUM4 889 aa19.67■□□□□ 0.74
USE1-206ENST00000595101 ARFGEF2Q9Y6D5 1785 aa19.67■□□□□ 0.74
USE1-206ENST00000595101 SLC10A5Q5PT55 438 aa19.67■□□□□ 0.74
USE1-206ENST00000595101 MRPL50Q8N5N7 158 aaKnown RBP19.67■□□□□ 0.74
USE1-206ENST00000595101 STYK1Q6J9G0 422 aa19.66■□□□□ 0.74
USE1-206ENST00000595101 OLFM4Q6UX06 510 aa19.66■□□□□ 0.74
USE1-206ENST00000595101 SH3TC1Q8TE82 1336 aa19.66■□□□□ 0.74
USE1-206ENST00000595101 C21orf2O43822 256 aa19.65■□□□□ 0.74
USE1-206ENST00000595101 NPR1P16066 1061 aa19.65■□□□□ 0.74
USE1-206ENST00000595101 YY1P25490 414 aa19.65■□□□□ 0.74
USE1-206ENST00000595101 PRPF40BQ6NWY9 871 aaKnown RBP19.65■□□□□ 0.74
USE1-206ENST00000595101 ANKRD36CQ5JPF3 1778 aa19.65■□□□□ 0.74
USE1-206ENST00000595101 DNAAF4Q8WXU2 420 aa19.65■□□□□ 0.74
USE1-206ENST00000595101 PDZRN3Q9UPQ7 1066 aa19.65■□□□□ 0.74
USE1-206ENST00000595101 CCDC191Q8NCU4 936 aa19.64■□□□□ 0.73
USE1-206ENST00000595101 NLRP3Q96P20 1036 aa19.64■□□□□ 0.73
USE1-206ENST00000595101 NEURL1BA8MQ27 555 aa19.63■□□□□ 0.73
USE1-206ENST00000595101 CNKSR1Q969H4 720 aa19.63■□□□□ 0.73
USE1-206ENST00000595101 CWC25Q9NXE8 425 aaPredicted RBP19.63■□□□□ 0.73
USE1-206ENST00000595101 RASSF7Q02833 373 aa19.62■□□□□ 0.73
USE1-206ENST00000595101 ZBTB38Q8NAP3 1195 aaPredicted RBP19.62■□□□□ 0.73
USE1-206ENST00000595101 C7orf43Q8WVR3 580 aa19.62■□□□□ 0.73
USE1-206ENST00000595101 DLEC1Q9Y238 1755 aa19.62■□□□□ 0.73
USE1-206ENST00000595101 IRS4O14654 1257 aaPredicted RBP19.62■□□□□ 0.73
USE1-206ENST00000595101 PRELPP51888 382 aa19.62■□□□□ 0.73
USE1-206ENST00000595101 RNF123Q5XPI4 1314 aa19.62■□□□□ 0.73
USE1-206ENST00000595101 ZBED9Q6R2W3 1325 aa19.62■□□□□ 0.73
USE1-206ENST00000595101 RIC1Q4ADV7 1423 aa19.62■□□□□ 0.73
USE1-206ENST00000595101 NEXNQ0ZGT2 675 aa19.61■□□□□ 0.73
USE1-206ENST00000595101 RPGRQ92834 1020 aaKnown RBP19.61■□□□□ 0.73
USE1-206ENST00000595101 SLX4Q8IY92 1834 aa19.61■□□□□ 0.73
USE1-206ENST00000595101 PCCAP05165 728 aaPredicted RBP19.6■□□□□ 0.73
USE1-206ENST00000595101 HOXA10P31260 410 aaPredicted RBP19.6■□□□□ 0.73
USE1-206ENST00000595101 BEND3Q5T5X7 828 aa19.6■□□□□ 0.73
USE1-206ENST00000595101 NFKBIEO00221 500 aa19.6■□□□□ 0.73
USE1-206ENST00000595101 SMC4Q9NTJ3 1288 aa19.6■□□□□ 0.73
USE1-206ENST00000595101 RARSP54136 660 aaKnown RBP19.59■□□□□ 0.73
USE1-206ENST00000595101 GCKRQ14397 625 aa19.59■□□□□ 0.73
USE1-206ENST00000595101 SLC4A10Q6U841 1118 aa19.59■□□□□ 0.73
USE1-206ENST00000595101 ALDH1B1P30837 517 aa19.58■□□□□ 0.73
USE1-206ENST00000595101 ALDH1L2Q3SY69 923 aa19.58■□□□□ 0.73
USE1-206ENST00000595101 LINS1Q8NG48 757 aa19.58■□□□□ 0.73
USE1-206ENST00000595101 RBM17Q96I25 401 aaKnown RBP19.58■□□□□ 0.73
USE1-206ENST00000595101 CCDC85AQ96PX6 553 aaPredicted RBP19.58■□□□□ 0.73
USE1-206ENST00000595101 ABCC4O15439 1325 aa19.57■□□□□ 0.72
USE1-206ENST00000595101 ARFGEF1Q9Y6D6 1849 aa19.57■□□□□ 0.72
USE1-206ENST00000595101 CT47B1P0C2W7 299 aaPredicted RBP19.57■□□□□ 0.72
USE1-206ENST00000595101 UBE3BQ7Z3V4 1068 aa19.57■□□□□ 0.72
USE1-206ENST00000595101 CRAMP1Q96RY5 1269 aa19.57■□□□□ 0.72
USE1-206ENST00000595101 H7C1W4 665 aa19.56■□□□□ 0.72
USE1-206ENST00000595101 C9orf131Q5VYM1 1079 aa19.56■□□□□ 0.72
USE1-206ENST00000595101 NOB1Q9ULX3 412 aaKnown RBP19.56■□□□□ 0.72
USE1-206ENST00000595101 COL4A1P02462 1669 aa19.55■□□□□ 0.72
USE1-206ENST00000595101 BCAR3O75815 825 aa19.55■□□□□ 0.72
USE1-206ENST00000595101 CASP7P55210 303 aa19.55■□□□□ 0.72
USE1-206ENST00000595101 SF3B3Q15393 1217 aaKnown RBP19.55■□□□□ 0.72
USE1-206ENST00000595101 SEC31BQ9NQW1 1179 aa19.55■□□□□ 0.72
USE1-206ENST00000595101 DDX60Q8IY21 1712 aaKnown RBP19.55■□□□□ 0.72
USE1-206ENST00000595101 CELF1Q92879 486 aaKnown RBP19.55■□□□□ 0.72
USE1-206ENST00000595101 CACNA1SQ13698 1873 aa19.54■□□□□ 0.72
USE1-206ENST00000595101 CACNA1FO60840 1977 aa19.53■□□□□ 0.72
USE1-206ENST00000595101 PPEF1O14829 653 aaPredicted RBP19.53■□□□□ 0.72
USE1-206ENST00000595101 PDE8AO60658 829 aa19.53■□□□□ 0.72
USE1-206ENST00000595101 DDX46Q7L014 1031 aaKnown RBP19.53■□□□□ 0.72
USE1-206ENST00000595101 ZNF784Q8NCA9 323 aaPredicted RBP19.53■□□□□ 0.72
USE1-206ENST00000595101 RNF181Q9P0P0 153 aa19.53■□□□□ 0.72
USE1-206ENST00000595101 PTPRCP08575 1304 aa19.53■□□□□ 0.72
USE1-206ENST00000595101 CDHR2Q9BYE9 1310 aa19.53■□□□□ 0.72
USE1-206ENST00000595101 CHD4Q14839 1912 aa19.53■□□□□ 0.72
USE1-206ENST00000595101 LAMB2P55268 1798 aa19.52■□□□□ 0.72
USE1-206ENST00000595101 GRAPQ13588 217 aa19.52■□□□□ 0.71
USE1-206ENST00000595101 CCDC93Q567U6 631 aa19.52■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms