RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 VPS37CA5D8V6 355 aaPredicted RBP15.75■□□□□ 0.11
VRK3-209ENST00000594948 MAP3K11Q16584 847 aa15.75■□□□□ 0.11
VRK3-209ENST00000594948 RBM43Q6ZSC3 357 aaKnown RBP15.75■□□□□ 0.11
VRK3-209ENST00000594948 SCAND2PQ9GZW5 306 aaPredicted RBP15.75■□□□□ 0.11
VRK3-209ENST00000594948 NUP62CLQ9H1M0 184 aa15.75■□□□□ 0.11
VRK3-209ENST00000594948 LGR6Q9HBX8 967 aa15.75■□□□□ 0.11
VRK3-209ENST00000594948 HMG20BQ9P0W2 317 aa15.75■□□□□ 0.11
VRK3-209ENST00000594948 KIF3AQ9Y496 699 aa15.75■□□□□ 0.11
VRK3-209ENST00000594948 NPHP4O75161 1426 aaPredicted RBP15.75■□□□□ 0.11
VRK3-209ENST00000594948 SETD1BQ9UPS6 1966 aaKnown RBP15.75■□□□□ 0.11
VRK3-209ENST00000594948 BTBD11A6QL63 1104 aa15.75■□□□□ 0.11
VRK3-209ENST00000594948 AP5Z1O43299 807 aa15.75■□□□□ 0.11
VRK3-209ENST00000594948 AMOTQ4VCS5 1084 aa15.75■□□□□ 0.11
VRK3-209ENST00000594948 PLEKHO1Q53GL0 409 aaPredicted RBP15.75■□□□□ 0.11
VRK3-209ENST00000594948 LARP1BQ659C4 914 aaKnown RBP15.75■□□□□ 0.11
VRK3-209ENST00000594948 TTC6Q86TZ1 520 aa15.75■□□□□ 0.11
VRK3-209ENST00000594948 LARP6Q9BRS8 491 aaKnown RBP15.75■□□□□ 0.11
VRK3-209ENST00000594948 DDX19AQ9NUU7 478 aaKnown RBP15.75■□□□□ 0.11
VRK3-209ENST00000594948 C9orf78Q9NZ63 289 aaPredicted RBP15.75■□□□□ 0.11
VRK3-209ENST00000594948 TPCN1Q9ULQ1 816 aa15.75■□□□□ 0.11
VRK3-209ENST00000594948 RFX7Q2KHR2 1363 aa15.74■□□□□ 0.11
VRK3-209ENST00000594948 SLC27A2O14975 620 aa15.74■□□□□ 0.11
VRK3-209ENST00000594948 KCNF1Q9H3M0 494 aa15.74■□□□□ 0.11
VRK3-209ENST00000594948 NPHP3Q7Z494 1330 aa15.74■□□□□ 0.11
VRK3-209ENST00000594948 CHAF1AQ13111 956 aaPredicted RBP15.73■□□□□ 0.11
VRK3-209ENST00000594948 NBPF6Q5VWK0 638 aa15.73■□□□□ 0.11
VRK3-209ENST00000594948 BLOC1S2Q6QNY1 142 aa15.73■□□□□ 0.11
VRK3-209ENST00000594948 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.73■□□□□ 0.11
VRK3-209ENST00000594948 AACSQ86V21 672 aa15.73■□□□□ 0.11
VRK3-209ENST00000594948 THEMISQ8N1K5 641 aaPredicted RBP15.73■□□□□ 0.11
VRK3-209ENST00000594948 USHBP1Q8N6Y0 703 aa15.73■□□□□ 0.11
VRK3-209ENST00000594948 LINS1Q8NG48 757 aa15.73■□□□□ 0.11
VRK3-209ENST00000594948 NBPF4Q96M43 638 aa15.73■□□□□ 0.11
VRK3-209ENST00000594948 MAP3K2Q9Y2U5 619 aa15.73■□□□□ 0.11
VRK3-209ENST00000594948 GIGYF1O75420 1035 aaPredicted RBP15.73■□□□□ 0.11
VRK3-209ENST00000594948 RPS6KB1P23443 525 aa15.73■□□□□ 0.11
VRK3-209ENST00000594948 TYRO3Q06418 890 aa15.73■□□□□ 0.11
VRK3-209ENST00000594948 NMIQ13287 307 aaPredicted RBP15.73■□□□□ 0.11
VRK3-209ENST00000594948 KCNH5Q8NCM2 988 aa15.73■□□□□ 0.11
VRK3-209ENST00000594948 MRVI1Q9Y6F6 885 aa15.73■□□□□ 0.11
VRK3-209ENST00000594948 KCNQ3O43525 872 aa15.72■□□□□ 0.11
VRK3-209ENST00000594948 CAVIN2O95810 425 aa15.72■□□□□ 0.11
VRK3-209ENST00000594948 KCNJ4P48050 445 aa15.72■□□□□ 0.11
VRK3-209ENST00000594948 ZNF710Q8N1W2 664 aa15.72■□□□□ 0.11
VRK3-209ENST00000594948 SLIT3O75094 1523 aa15.72■□□□□ 0.11
VRK3-209ENST00000594948 GRM8O00222 908 aa15.71■□□□□ 0.11
VRK3-209ENST00000594948 RNMTO43148 476 aaKnown RBP15.71■□□□□ 0.11
VRK3-209ENST00000594948 SASH1O94885 1247 aa15.71■□□□□ 0.11
VRK3-209ENST00000594948 G3BP1Q13283 466 aaKnown RBP eCLIP15.71■□□□□ 0.11
VRK3-209ENST00000594948 KRT32Q14532 448 aa15.71■□□□□ 0.11
VRK3-209ENST00000594948 NUTM2GQ5VZR2 741 aa15.71■□□□□ 0.11
VRK3-209ENST00000594948 ZNF530Q6P9A1 599 aaPredicted RBP15.71■□□□□ 0.11
VRK3-209ENST00000594948 CDC37L1Q7L3B6 337 aa15.71■□□□□ 0.11
VRK3-209ENST00000594948 NECAB1Q8N987 351 aa15.71■□□□□ 0.11
VRK3-209ENST00000594948 LAMA4Q16363 1823 aa15.71■□□□□ 0.1
VRK3-209ENST00000594948 DDX58O95786 925 aaKnown RBP15.71■□□□□ 0.1
VRK3-209ENST00000594948 CLSTN2Q9H4D0 955 aa15.71■□□□□ 0.1
VRK3-209ENST00000594948 PYCARDQ9ULZ3 195 aa15.71■□□□□ 0.1
VRK3-209ENST00000594948 PHF8Q9UPP1 1060 aa15.71■□□□□ 0.1
VRK3-209ENST00000594948 SCN11AQ9UI33 1791 aa15.7■□□□□ 0.1
VRK3-209ENST00000594948 C5P01031 1676 aa15.7■□□□□ 0.1
VRK3-209ENST00000594948 SYCP1Q15431 976 aa15.7■□□□□ 0.1
VRK3-209ENST00000594948 USPL1Q5W0Q7 1092 aa15.7■□□□□ 0.1
VRK3-209ENST00000594948 TDRD7Q8NHU6 1098 aaKnown RBP15.7■□□□□ 0.1
VRK3-209ENST00000594948 EAF2Q96CJ1 260 aaPredicted RBP15.7■□□□□ 0.1
VRK3-209ENST00000594948 FAM227BQ96M60 508 aa15.7■□□□□ 0.1
VRK3-209ENST00000594948 TNMDQ9H2S6 317 aa15.7■□□□□ 0.1
VRK3-209ENST00000594948 PA2G4Q9UQ80 394 aaKnown RBP15.7■□□□□ 0.1
VRK3-209ENST00000594948 CTIFO43310 598 aaKnown RBP15.69■□□□□ 0.1
VRK3-209ENST00000594948 LIG1P18858 919 aa15.69■□□□□ 0.1
VRK3-209ENST00000594948 TOB2Q14106 344 aaPredicted RBP15.69■□□□□ 0.1
VRK3-209ENST00000594948 UTP14CQ5TAP6 766 aaKnown RBP15.69■□□□□ 0.1
VRK3-209ENST00000594948 C17orf53Q8N3J3 647 aaPredicted RBP15.69■□□□□ 0.1
VRK3-209ENST00000594948 MPNDQ8N594 471 aa15.69■□□□□ 0.1
VRK3-209ENST00000594948 PRDM4Q9UKN5 801 aa15.69■□□□□ 0.1
VRK3-209ENST00000594948 PXDNQ92626 1479 aa15.69■□□□□ 0.1
VRK3-209ENST00000594948 AFDNP55196 1824 aaKnown RBP15.69■□□□□ 0.1
VRK3-209ENST00000594948 ANXA1P04083 346 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 KCNA6P17658 529 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 CDC25BP30305 580 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 PLCB2Q00722 1185 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 LEO1Q8WVC0 666 aaPredicted RBP15.68■□□□□ 0.1
VRK3-209ENST00000594948 KAZALD1Q96I82 304 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 SUCLG2Q96I99 432 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 SPATA32Q96LK8 384 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 BCL2L12Q9HB09 334 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 DDX21Q9NR30 783 aaKnown RBP eCLIP15.68■□□□□ 0.1
VRK3-209ENST00000594948 A0A0D9SFI3 127 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 GOLGA6L4A6NEF3 574 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 C1orf141Q5JVX7 400 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 PLA2G4DQ86XP0 818 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 ANKRD7Q92527 254 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 FSD1Q9BTV5 496 aa15.68■□□□□ 0.1
VRK3-209ENST00000594948 COL15A1P39059 1388 aa15.67■□□□□ 0.1
VRK3-209ENST00000594948 CBX8Q9HC52 389 aa15.67■□□□□ 0.1
VRK3-209ENST00000594948 DACT1Q9NYF0 836 aa15.67■□□□□ 0.1
VRK3-209ENST00000594948 CWF19L2Q2TBE0 894 aaKnown RBP15.66■□□□□ 0.1
VRK3-209ENST00000594948 LARP1Q6PKG0 1096 aaKnown RBP15.66■□□□□ 0.1
VRK3-209ENST00000594948 ZSCAN16Q9H4T2 348 aaPredicted RBP15.66■□□□□ 0.1
VRK3-209ENST00000594948 BICC1Q9H694 974 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms