RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 SUCLG2Q96I99 432 aa18.63■□□□□ 0.57
PNKP-204ENST00000594661 ASAP1Q9ULH1 1129 aa18.63■□□□□ 0.57
PNKP-204ENST00000594661 SPATA31A1Q5TZJ5 1347 aa18.63■□□□□ 0.57
PNKP-204ENST00000594661 UBAP1LF5GYI3 381 aa18.62■□□□□ 0.57
PNKP-204ENST00000594661 EXOC5O00471 708 aa18.62■□□□□ 0.57
PNKP-204ENST00000594661 PDE1AP54750 535 aa18.62■□□□□ 0.57
PNKP-204ENST00000594661 HSCBQ8IWL3 235 aa18.62■□□□□ 0.57
PNKP-204ENST00000594661 LRP6O75581 1613 aa18.62■□□□□ 0.57
PNKP-204ENST00000594661 OSBPL3Q9H4L5 887 aa18.62■□□□□ 0.57
PNKP-204ENST00000594661 GCKRQ14397 625 aa18.61■□□□□ 0.57
PNKP-204ENST00000594661 RAB3GAP1Q15042 981 aa18.61■□□□□ 0.57
PNKP-204ENST00000594661 TSHZ3Q63HK5 1081 aa18.61■□□□□ 0.57
PNKP-204ENST00000594661 SDSP20132 328 aa18.61■□□□□ 0.57
PNKP-204ENST00000594661 IL1RAPL2Q9NP60 686 aa18.61■□□□□ 0.57
PNKP-204ENST00000594661 ATG3Q9NT62 314 aa18.61■□□□□ 0.57
PNKP-204ENST00000594661 ZKSCAN5Q9Y2L8 839 aa18.61■□□□□ 0.57
PNKP-204ENST00000594661 AFDNP55196 1824 aaKnown RBP18.6■□□□□ 0.57
PNKP-204ENST00000594661 RAB11FIP3O75154 756 aa18.6■□□□□ 0.57
PNKP-204ENST00000594661 TTLL7Q6ZT98 887 aa18.6■□□□□ 0.57
PNKP-204ENST00000594661 PLBD2Q8NHP8 589 aa18.6■□□□□ 0.57
PNKP-204ENST00000594661 ARID3AQ99856 593 aa18.6■□□□□ 0.57
PNKP-204ENST00000594661 BICC1Q9H694 974 aaKnown RBP18.6■□□□□ 0.57
PNKP-204ENST00000594661 BCL9O00512 1426 aa18.6■□□□□ 0.57
PNKP-204ENST00000594661 SLIT2O94813 1529 aa18.6■□□□□ 0.57
PNKP-204ENST00000594661 NUP188Q5SRE5 1749 aa18.59■□□□□ 0.57
PNKP-204ENST00000594661 NWD2Q9ULI1 1742 aa18.59■□□□□ 0.57
PNKP-204ENST00000594661 MX1P20591 662 aa18.59■□□□□ 0.57
PNKP-204ENST00000594661 RHPN1Q8TCX5 695 aa18.59■□□□□ 0.57
PNKP-204ENST00000594661 HDAC5Q9UQL6 1122 aa18.59■□□□□ 0.57
PNKP-204ENST00000594661 TUBGCP6Q96RT7 1819 aa18.58■□□□□ 0.57
PNKP-204ENST00000594661 ATP5J2-PTCD1G3V325 749 aa18.58■□□□□ 0.57
PNKP-204ENST00000594661 DOT1LQ8TEK3 1739 aa18.58■□□□□ 0.56
PNKP-204ENST00000594661 SNX21Q969T3 373 aa18.58■□□□□ 0.56
PNKP-204ENST00000594661 KIF2CQ99661 725 aa18.58■□□□□ 0.56
PNKP-204ENST00000594661 THRAP3Q9Y2W1 955 aaKnown RBP18.58■□□□□ 0.56
PNKP-204ENST00000594661 SPATA31A5Q5VU36 1347 aa18.57■□□□□ 0.56
PNKP-204ENST00000594661 SPATA31A7Q8IWB4 1347 aa18.57■□□□□ 0.56
PNKP-204ENST00000594661 ZNF445P59923 1031 aa18.57■□□□□ 0.56
PNKP-204ENST00000594661 CASC1Q6TDU7 716 aa18.57■□□□□ 0.56
PNKP-204ENST00000594661 DNAJC10Q8IXB1 793 aa18.57■□□□□ 0.56
PNKP-204ENST00000594661 JARID2Q92833 1246 aaPredicted RBP18.57■□□□□ 0.56
PNKP-204ENST00000594661 KIF1BPQ96EK5 621 aa18.57■□□□□ 0.56
PNKP-204ENST00000594661 CDCA7Q9BWT1 371 aaPredicted RBP18.57■□□□□ 0.56
PNKP-204ENST00000594661 PA2G4Q9UQ80 394 aaKnown RBP18.57■□□□□ 0.56
PNKP-204ENST00000594661 RBM42Q9BTD8 480 aaKnown RBP18.56■□□□□ 0.56
PNKP-204ENST00000594661 DDB1Q16531 1140 aa18.56■□□□□ 0.56
PNKP-204ENST00000594661 KLHL40Q2TBA0 621 aa18.56■□□□□ 0.56
PNKP-204ENST00000594661 EPHA10Q5JZY3 1008 aa18.56■□□□□ 0.56
PNKP-204ENST00000594661 NUTM1Q86Y26 1132 aa18.56■□□□□ 0.56
PNKP-204ENST00000594661 SYTL4Q96C24 671 aaPredicted RBP18.56■□□□□ 0.56
PNKP-204ENST00000594661 STAP2Q9UGK3 403 aa18.56■□□□□ 0.56
PNKP-204ENST00000594661 KAT6BQ8WYB5 2073 aa18.56■□□□□ 0.56
PNKP-204ENST00000594661 CLEC17AQ6ZS10 378 aa18.55■□□□□ 0.56
PNKP-204ENST00000594661 MYRIPQ8NFW9 859 aa18.55■□□□□ 0.56
PNKP-204ENST00000594661 HSP90AB4PQ58FF6 505 aa18.55■□□□□ 0.56
PNKP-204ENST00000594661 SLC4A9Q96Q91 983 aa18.55■□□□□ 0.56
PNKP-204ENST00000594661 ZBTB3Q9H5J0 574 aa18.55■□□□□ 0.56
PNKP-204ENST00000594661 CCDC9Q9Y3X0 531 aaKnown RBP18.55■□□□□ 0.56
PNKP-204ENST00000594661 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.54■□□□□ 0.56
PNKP-204ENST00000594661 PRIM1P49642 420 aaKnown RBP18.54■□□□□ 0.56
PNKP-204ENST00000594661 OS9Q13438 667 aaPredicted RBP18.54■□□□□ 0.56
PNKP-204ENST00000594661 UBE3BQ7Z3V4 1068 aa18.54■□□□□ 0.56
PNKP-204ENST00000594661 A0A087WZG4 1122 aa18.53■□□□□ 0.56
PNKP-204ENST00000594661 TEX13AQ9BXU3 409 aaPredicted RBP18.53■□□□□ 0.56
PNKP-204ENST00000594661 CASP7P55210 303 aa18.52■□□□□ 0.56
PNKP-204ENST00000594661 MARCH10Q8NA82 808 aaPredicted RBP18.52■□□□□ 0.56
PNKP-204ENST00000594661 ZNF830Q96NB3 372 aaPredicted RBP18.52■□□□□ 0.56
PNKP-204ENST00000594661 TJP1Q07157 1748 aa18.52■□□□□ 0.56
PNKP-204ENST00000594661 GTF2F1P35269 517 aaKnown RBP eCLIP18.52■□□□□ 0.557e-8■■■□□ 17.9
PNKP-204ENST00000594661 USP26Q9BXU7 913 aa18.52■□□□□ 0.55
PNKP-204ENST00000594661 ZNF330Q9Y3S2 320 aaPredicted RBP18.52■□□□□ 0.55
PNKP-204ENST00000594661 AOX1Q06278 1338 aa18.52■□□□□ 0.55
PNKP-204ENST00000594661 JCADQ9P266 1359 aa18.52■□□□□ 0.55
PNKP-204ENST00000594661 BARGINQ6ZT62 677 aa18.51■□□□□ 0.55
PNKP-204ENST00000594661 ZNF710Q8N1W2 664 aa18.51■□□□□ 0.55
PNKP-204ENST00000594661 C8orf37Q96NL8 207 aa18.51■□□□□ 0.55
PNKP-204ENST00000594661 COL15A1P39059 1388 aa18.5■□□□□ 0.55
PNKP-204ENST00000594661 STARD3NLO95772 234 aa18.5■□□□□ 0.55
PNKP-204ENST00000594661 UNC5CLQ8IV45 518 aa18.5■□□□□ 0.55
PNKP-204ENST00000594661 KLHDC4Q8TBB5 520 aa18.5■□□□□ 0.55
PNKP-204ENST00000594661 CBX1P83916 185 aa18.5■□□□□ 0.55
PNKP-204ENST00000594661 PI4K2BQ8TCG2 481 aa18.5■□□□□ 0.55
PNKP-204ENST00000594661 BCL9LQ86UU0 1499 aa18.49■□□□□ 0.55
PNKP-204ENST00000594661 CD2BP2O95400 341 aaKnown RBP18.49■□□□□ 0.55
PNKP-204ENST00000594661 RABL6Q3YEC7 729 aaPredicted RBP18.49■□□□□ 0.55
PNKP-204ENST00000594661 ERC1Q8IUD2 1116 aa18.49■□□□□ 0.55
PNKP-204ENST00000594661 ACSBG1Q96GR2 724 aa18.49■□□□□ 0.55
PNKP-204ENST00000594661 CWC25Q9NXE8 425 aaPredicted RBP18.49■□□□□ 0.55
PNKP-204ENST00000594661 CCDC39Q9UFE4 941 aa18.49■□□□□ 0.55
PNKP-204ENST00000594661 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.49■□□□□ 0.55
PNKP-204ENST00000594661 GOLGA6L22H0YM25 854 aa18.49■□□□□ 0.55
PNKP-204ENST00000594661 H7C1W4 665 aa18.49■□□□□ 0.55
PNKP-204ENST00000594661 SASH1O94885 1247 aa18.49■□□□□ 0.55
PNKP-204ENST00000594661 CYP19A1P11511 503 aaPredicted RBP18.49■□□□□ 0.55
PNKP-204ENST00000594661 SIL1Q9H173 461 aa18.49■□□□□ 0.55
PNKP-204ENST00000594661 A0A0G2JS52 829 aa18.48■□□□□ 0.55
PNKP-204ENST00000594661 TRIM6-TRIM34B2RNG4 842 aa18.48■□□□□ 0.55
PNKP-204ENST00000594661 REC8O95072 547 aa18.48■□□□□ 0.55
PNKP-204ENST00000594661 RILPL2Q969X0 211 aa18.48■□□□□ 0.55
PNKP-204ENST00000594661 NGLY1Q96IV0 654 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms