RNA–Protein interactions for RNA: ENST00000594461.2

LINC00347-202, long intergenic non-protein coding RNA 347, humanhuman

TSL 1 (best) BASIC

Gene LINC00347, Length 2,371 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00347-202ENST00000594461 SYNE3Q6ZMZ3 975 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 TCP11Q8WWU5 503 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 GPBP1L1Q9HC44 474 aaPredicted RBP8.59□□□□□ -1.03
LINC00347-202ENST00000594461 PDZRN3Q9UPQ7 1066 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 ITM2BQ9Y287 266 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 GPTP24298 496 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 ABL2P42684 1182 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 CDR1P51861 262 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 SCRN1Q12765 414 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 IQCB1Q15051 598 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 CCDC70Q6NSX1 233 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 CWC27Q6UX04 472 aaKnown RBP8.59□□□□□ -1.03
LINC00347-202ENST00000594461 ZBTB10Q96DT7 871 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 FAM107BQ9H098 131 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 TBC1D7Q9P0N9 293 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 CLIP2Q9UDT6 1046 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 IQGAP2Q13576 1575 aa8.59□□□□□ -1.03
LINC00347-202ENST00000594461 SH3BP5O60239 455 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 TPPPO94811 219 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 PNMA6AP0CW24 399 aaPredicted RBP8.58□□□□□ -1.04
LINC00347-202ENST00000594461 CYP11B2P19099 503 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 MECOMQ03112 1051 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 USP4Q13107 963 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 PDE3BQ13370 1112 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 MYSM1Q5VVJ2 828 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 MYOCDQ8IZQ8 938 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 NBPF15Q8N660 670 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 SPC24Q8NBT2 197 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 JPH4Q96JJ6 628 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 FAM81BQ96LP2 452 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 PDRG1Q9NUG6 133 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 MKRN1Q9UHC7 482 aaKnown RBP8.58□□□□□ -1.04
LINC00347-202ENST00000594461 MRFAP1Q9Y605 127 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 KRT38O76015 456 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 RANBP1P43487 201 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 LAMB3Q13751 1172 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 ERCC6L2Q5T890 1561 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 ARMC9Q7Z3E5 817 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 SAPCD2Q86UD0 394 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 TTC30BQ8N4P2 665 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 DUSP9Q99956 384 aaKnown RBP8.58□□□□□ -1.04
LINC00347-202ENST00000594461 MMADHCQ9H3L0 296 aaPredicted RBP8.58□□□□□ -1.04
LINC00347-202ENST00000594461 TRPV5Q9NQA5 729 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 HOMER3Q9NSC5 361 aa8.58□□□□□ -1.04
LINC00347-202ENST00000594461 KCNA2P16389 499 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 PKN1Q16512 942 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 PREPLQ4J6C6 727 aaPredicted RBP8.57□□□□□ -1.04
LINC00347-202ENST00000594461 SOGA3Q5TF21 947 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 KIAA1328Q86T90 577 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 TMEM110Q86TL2 294 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 REXO1L1PQ8IX06 675 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 B4GALNT2Q8NHY0 566 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 TSGA10Q9BZW7 698 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 RABL2AQ9UBK7 228 aaPredicted RBP8.57□□□□□ -1.04
LINC00347-202ENST00000594461 E2F6O75461 281 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 ERLIN2O94905 339 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 COPB2P35606 906 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 DDR1Q08345 913 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 RRP12Q5JTH9 1297 aaKnown RBP8.57□□□□□ -1.04
LINC00347-202ENST00000594461 CCDC80Q76M96 950 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 KIAA0825Q8IV33 1275 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 SAAL1Q96ER3 474 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 ERO1AQ96HE7 468 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 THUMPD2Q9BTF0 503 aaKnown RBP8.57□□□□□ -1.04
LINC00347-202ENST00000594461 UBXN6Q9BZV1 441 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 ODF2LQ9ULJ1 636 aa8.57□□□□□ -1.04
LINC00347-202ENST00000594461 NUP160Q12769 1436 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 MYO1BO43795 1136 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 PLIN1O60240 522 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 H2AFXP16104 143 aaPredicted RBP8.56□□□□□ -1.04
LINC00347-202ENST00000594461 MAGEA10P43363 369 aaPredicted RBP8.56□□□□□ -1.04
LINC00347-202ENST00000594461 LMAN1P49257 510 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 MCCD1P59942 119 aaPredicted RBP8.56□□□□□ -1.04
LINC00347-202ENST00000594461 FAM81AQ8TBF8 368 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 RTF1Q92541 710 aaKnown RBP8.56□□□□□ -1.04
LINC00347-202ENST00000594461 BHMTQ93088 406 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 DDX11Q96FC9 970 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 PHACTR1Q9C0D0 580 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 ANKIB1Q9P2G1 1089 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 EXOC6BQ9Y2D4 811 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 ROCK1Q13464 1354 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 HMGB1P1B2RPK0 211 aaPredicted RBP8.56□□□□□ -1.04
LINC00347-202ENST00000594461 MPP3Q13368 585 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 ANKRD13BQ86YJ7 626 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 PARP9Q8IXQ6 854 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 TRIML1Q8N9V2 468 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 UHMK1Q8TAS1 419 aaKnown RBP8.56□□□□□ -1.04
LINC00347-202ENST00000594461 RSPH1Q8WYR4 309 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 TRIM11Q96F44 468 aa8.56□□□□□ -1.04
LINC00347-202ENST00000594461 KIAA0586Q9BVV6 1533 aa8.55□□□□□ -1.04
LINC00347-202ENST00000594461 ZMYM3Q14202 1370 aa8.55□□□□□ -1.04
LINC00347-202ENST00000594461 ATP8B1O43520 1251 aa8.55□□□□□ -1.04
LINC00347-202ENST00000594461 MAP4K4O95819 1239 aaPredicted RBP8.55□□□□□ -1.04
LINC00347-202ENST00000594461 PLEKHO1Q53GL0 409 aaPredicted RBP8.55□□□□□ -1.04
LINC00347-202ENST00000594461 FAM114A1Q8IWE2 563 aa8.55□□□□□ -1.04
LINC00347-202ENST00000594461 MIPOL1Q8TD10 442 aa8.55□□□□□ -1.04
LINC00347-202ENST00000594461 KAT2BQ92831 832 aa8.55□□□□□ -1.04
LINC00347-202ENST00000594461 KCNN1Q92952 543 aa8.55□□□□□ -1.04
LINC00347-202ENST00000594461 RGL1Q9NZL6 768 aa8.55□□□□□ -1.04
LINC00347-202ENST00000594461 N6AMT1Q9Y5N5 214 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms