RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 ZKSCAN2Q63HK3 967 aa20.53■□□□□ 0.88
USHBP1-204ENST00000594190 CNBD1Q8NA66 436 aa20.53■□□□□ 0.88
USHBP1-204ENST00000594190 RRAGCQ9HB90 399 aa20.53■□□□□ 0.88
USHBP1-204ENST00000594190 HLFQ16534 295 aa20.52■□□□□ 0.88
USHBP1-204ENST00000594190 TSPYL6Q8N831 410 aa20.52■□□□□ 0.88
USHBP1-204ENST00000594190 ARHGAP45Q92619 1136 aa20.52■□□□□ 0.88
USHBP1-204ENST00000594190 LMNB1P20700 586 aa20.51■□□□□ 0.87
USHBP1-204ENST00000594190 AAMPQ13685 434 aa20.51■□□□□ 0.87
USHBP1-204ENST00000594190 LRP10Q7Z4F1 713 aa20.51■□□□□ 0.87
USHBP1-204ENST00000594190 JMYQ8N9B5 988 aa20.51■□□□□ 0.87
USHBP1-204ENST00000594190 PPP4R2Q9NY27 417 aa20.51■□□□□ 0.87
USHBP1-204ENST00000594190 IRX6P78412 446 aaPredicted RBP20.5■□□□□ 0.87
USHBP1-204ENST00000594190 STYK1Q6J9G0 422 aa20.5■□□□□ 0.87
USHBP1-204ENST00000594190 C7orf43Q8WVR3 580 aa20.5■□□□□ 0.87
USHBP1-204ENST00000594190 LTBP3Q9NS15 1303 aa20.5■□□□□ 0.87
USHBP1-204ENST00000594190 PLIN1O60240 522 aa20.49■□□□□ 0.87
USHBP1-204ENST00000594190 COL13A1Q5TAT6 717 aaPredicted RBP20.49■□□□□ 0.87
USHBP1-204ENST00000594190 CCDC30Q5VVM6 783 aa20.49■□□□□ 0.87
USHBP1-204ENST00000594190 FRAT1Q92837 279 aaPredicted RBP20.49■□□□□ 0.87
USHBP1-204ENST00000594190 ZNF652Q9Y2D9 606 aa20.49■□□□□ 0.87
USHBP1-204ENST00000594190 SNED1Q8TER0 1413 aa20.48■□□□□ 0.87
USHBP1-204ENST00000594190 ELL2O00472 640 aaPredicted RBP20.48■□□□□ 0.87
USHBP1-204ENST00000594190 NPM2Q86SE8 214 aaKnown RBP20.48■□□□□ 0.87
USHBP1-204ENST00000594190 MRPL50Q8N5N7 158 aaKnown RBP20.48■□□□□ 0.87
USHBP1-204ENST00000594190 SMC1BQ8NDV3 1235 aa20.48■□□□□ 0.87
USHBP1-204ENST00000594190 ZNF622Q969S3 477 aaKnown RBP eCLIP20.48■□□□□ 0.87
USHBP1-204ENST00000594190 STK31Q9BXU1 1019 aa20.48■□□□□ 0.87
USHBP1-204ENST00000594190 ANKRD36CQ5JPF3 1778 aa20.48■□□□□ 0.87
USHBP1-204ENST00000594190 ERVV-1B6SEH8 477 aa20.47■□□□□ 0.87
USHBP1-204ENST00000594190 C21orf2O43822 256 aa20.47■□□□□ 0.87
USHBP1-204ENST00000594190 ST5P78524 1137 aa20.47■□□□□ 0.87
USHBP1-204ENST00000594190 ATF7IPQ6VMQ6 1270 aa20.47■□□□□ 0.87
USHBP1-204ENST00000594190 MASTLQ96GX5 879 aa20.47■□□□□ 0.87
USHBP1-204ENST00000594190 BCL2L13Q9BXK5 485 aa20.47■□□□□ 0.87
USHBP1-204ENST00000594190 NIP7Q9Y221 180 aaKnown RBP eCLIP20.47■□□□□ 0.87
USHBP1-204ENST00000594190 GLTPD2A6NH11 291 aa20.46■□□□□ 0.87
USHBP1-204ENST00000594190 PDIA6Q15084 440 aa20.46■□□□□ 0.87
USHBP1-204ENST00000594190 PRPF40BQ6NWY9 871 aaKnown RBP20.46■□□□□ 0.87
USHBP1-204ENST00000594190 TTLL7Q6ZT98 887 aa20.46■□□□□ 0.87
USHBP1-204ENST00000594190 NBPF5PQ86XG9 351 aaPredicted RBP20.46■□□□□ 0.87
USHBP1-204ENST00000594190 CNKSR1Q969H4 720 aa20.46■□□□□ 0.87
USHBP1-204ENST00000594190 API5Q9BZZ5 524 aaKnown RBP20.46■□□□□ 0.87
USHBP1-204ENST00000594190 PTPRCP08575 1304 aa20.46■□□□□ 0.87
USHBP1-204ENST00000594190 MAP3K15Q6ZN16 1313 aa20.46■□□□□ 0.87
USHBP1-204ENST00000594190 RIC1Q4ADV7 1423 aa20.45■□□□□ 0.86
USHBP1-204ENST00000594190 POTECB2RU33 542 aa20.45■□□□□ 0.86
USHBP1-204ENST00000594190 FTSJ3Q8IY81 847 aaKnown RBP20.45■□□□□ 0.86
USHBP1-204ENST00000594190 DZIP1LQ8IYY4 767 aaKnown RBP20.45■□□□□ 0.86
USHBP1-204ENST00000594190 ERBB4Q15303 1308 aa20.45■□□□□ 0.86
USHBP1-204ENST00000594190 ABCC12Q96J65 1359 aa20.45■□□□□ 0.86
USHBP1-204ENST00000594190 IBTKQ9P2D0 1353 aaPredicted RBP20.45■□□□□ 0.86
USHBP1-204ENST00000594190 TPTE2Q6XPS3 522 aa20.44■□□□□ 0.86
USHBP1-204ENST00000594190 CHMP4BQ9H444 224 aaKnown RBP20.44■□□□□ 0.86
USHBP1-204ENST00000594190 NOB1Q9ULX3 412 aaKnown RBP20.44■□□□□ 0.86
USHBP1-204ENST00000594190 UBN2Q6ZU65 1347 aa20.44■□□□□ 0.86
USHBP1-204ENST00000594190 PCNTO95613 3336 aa20.43■□□□□ 0.86
USHBP1-204ENST00000594190 CAPN15O75808 1086 aa20.43■□□□□ 0.86
USHBP1-204ENST00000594190 KRT24Q2M2I5 525 aa20.43■□□□□ 0.86
USHBP1-204ENST00000594190 CRY2Q49AN0 593 aa20.43■□□□□ 0.86
USHBP1-204ENST00000594190 TNS4Q8IZW8 715 aa20.43■□□□□ 0.86
USHBP1-204ENST00000594190 LAMB2P55268 1798 aa20.42■□□□□ 0.86
USHBP1-204ENST00000594190 TRIM27P14373 513 aa20.42■□□□□ 0.86
USHBP1-204ENST00000594190 HDGFL1Q5TGJ6 251 aa20.42■□□□□ 0.86
USHBP1-204ENST00000594190 CRBNQ96SW2 442 aa20.42■□□□□ 0.86
USHBP1-204ENST00000594190 NPR1P16066 1061 aa20.41■□□□□ 0.86
USHBP1-204ENST00000594190 C20orf194Q5TEA3 1177 aa20.41■□□□□ 0.86
USHBP1-204ENST00000594190 ZNF34Q8IZ26 560 aa20.41■□□□□ 0.86
USHBP1-204ENST00000594190 EXOC6Q8TAG9 804 aa20.41■□□□□ 0.86
USHBP1-204ENST00000594190 VEGFAP15692 232 aaPredicted RBP20.4■□□□□ 0.86
USHBP1-204ENST00000594190 TAOK3Q9H2K8 898 aa20.4■□□□□ 0.86
USHBP1-204ENST00000594190 ZNF219Q9P2Y4 722 aaPredicted RBP20.4■□□□□ 0.86
USHBP1-204ENST00000594190 SLC4A2P04920 1241 aa20.39■□□□□ 0.85
USHBP1-204ENST00000594190 MYL6BP14649 208 aa20.39■□□□□ 0.85
USHBP1-204ENST00000594190 PROSER3Q2NL68 480 aa20.39■□□□□ 0.85
USHBP1-204ENST00000594190 GIGYF2Q6Y7W6 1299 aaKnown RBP20.39■□□□□ 0.85
USHBP1-204ENST00000594190 DDX19BQ9UMR2 479 aa20.39■□□□□ 0.85
USHBP1-204ENST00000594190 SCN4AP35499 1836 aa20.39■□□□□ 0.85
USHBP1-204ENST00000594190 MVPQ14764 893 aaKnown RBP20.38■□□□□ 0.85
USHBP1-204ENST00000594190 SOGA3Q5TF21 947 aa20.38■□□□□ 0.85
USHBP1-204ENST00000594190 NPHP1O15259 732 aa20.37■□□□□ 0.85
USHBP1-204ENST00000594190 NTSR2O95665 410 aa20.37■□□□□ 0.85
USHBP1-204ENST00000594190 ERFEQ4G0M1 354 aa20.37■□□□□ 0.85
USHBP1-204ENST00000594190 SUSD4Q5VX71 490 aa20.37■□□□□ 0.85
USHBP1-204ENST00000594190 OLFM4Q6UX06 510 aa20.37■□□□□ 0.85
USHBP1-204ENST00000594190 NUTM1Q86Y26 1132 aa20.37■□□□□ 0.85
USHBP1-204ENST00000594190 PANK1Q8TE04 598 aa20.37■□□□□ 0.85
USHBP1-204ENST00000594190 ZBTB3Q9H5J0 574 aa20.37■□□□□ 0.85
USHBP1-204ENST00000594190 DBF4Q9UBU7 674 aaPredicted RBP20.37■□□□□ 0.85
USHBP1-204ENST00000594190 ABCC4O15439 1325 aa20.36■□□□□ 0.85
USHBP1-204ENST00000594190 FAM177BA6PVY3 158 aa20.36■□□□□ 0.85
USHBP1-204ENST00000594190 KIF6Q6ZMV9 814 aa20.36■□□□□ 0.85
USHBP1-204ENST00000594190 CCDC136Q96JN2 1154 aa20.36■□□□□ 0.85
USHBP1-204ENST00000594190 NYXQ9GZU5 481 aa20.36■□□□□ 0.85
USHBP1-204ENST00000594190 HOXA10P31260 410 aaPredicted RBP20.35■□□□□ 0.85
USHBP1-204ENST00000594190 CCDC93Q567U6 631 aa20.35■□□□□ 0.85
USHBP1-204ENST00000594190 COL4A5P29400 1685 aa20.35■□□□□ 0.85
USHBP1-204ENST00000594190 ADAMTSL1Q8N6G6 1762 aa20.34■□□□□ 0.85
USHBP1-204ENST00000594190 HSPA1AP0DMV8 641 aaKnown RBP20.34■□□□□ 0.85
USHBP1-204ENST00000594190 HSPA1BP0DMV9 641 aaKnown RBP20.34■□□□□ 0.85
USHBP1-204ENST00000594190 FKBP4Q02790 459 aaKnown RBP eCLIP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms