RNA–Protein interactions for RNA: ENST00000593700.5

CAPN12-202, Transcript of calpain 12, humanhuman

TSL 1 (best)

Gene CAPN12, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-202ENST00000593700 HSP90AB3PQ58FF7 597 aa18.37■□□□□ 0.53
CAPN12-202ENST00000593700 SLC16A10Q8TF71 515 aa18.37■□□□□ 0.53
CAPN12-202ENST00000593700 COL15A1P39059 1388 aa18.37■□□□□ 0.53
CAPN12-202ENST00000593700 A0A087WZG4 1122 aa18.36■□□□□ 0.53
CAPN12-202ENST00000593700 SSFA2P28290 1259 aa18.36■□□□□ 0.53
CAPN12-202ENST00000593700 MAP3K15Q6ZN16 1313 aa18.36■□□□□ 0.53
CAPN12-202ENST00000593700 LINC00116Q8NCU8 138 aa18.36■□□□□ 0.53
CAPN12-202ENST00000593700 MEIS3Q99687 375 aa18.36■□□□□ 0.53
CAPN12-202ENST00000593700 MYD88Q99836 296 aa18.36■□□□□ 0.53
CAPN12-202ENST00000593700 GNAI2P04899 355 aa18.35■□□□□ 0.53
CAPN12-202ENST00000593700 KCNQ4P56696 695 aa18.35■□□□□ 0.53
CAPN12-202ENST00000593700 ZNF827Q17R98 1081 aa18.35■□□□□ 0.53
CAPN12-202ENST00000593700 C9orf78Q9NZ63 289 aaPredicted RBP18.35■□□□□ 0.53
CAPN12-202ENST00000593700 PSDA5PKW4 1024 aaPredicted RBP18.34■□□□□ 0.53
CAPN12-202ENST00000593700 HMMRO75330 724 aa18.34■□□□□ 0.53
CAPN12-202ENST00000593700 TTLL7Q6ZT98 887 aa18.34■□□□□ 0.53
CAPN12-202ENST00000593700 DZIP3Q86Y13 1208 aaKnown RBP18.34■□□□□ 0.53
CAPN12-202ENST00000593700 ARXQ96QS3 562 aa18.34■□□□□ 0.53
CAPN12-202ENST00000593700 ZBTB3Q9H5J0 574 aa18.34■□□□□ 0.53
CAPN12-202ENST00000593700 RTCBQ9Y3I0 505 aaKnown RBP18.34■□□□□ 0.53
CAPN12-202ENST00000593700 LAMB2P55268 1798 aa18.34■□□□□ 0.53
CAPN12-202ENST00000593700 ERVV-1B6SEH8 477 aa18.33■□□□□ 0.52
CAPN12-202ENST00000593700 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.52
CAPN12-202ENST00000593700 HDAC1Q13547 482 aaPredicted RBP18.33■□□□□ 0.52
CAPN12-202ENST00000593700 INTS5Q6P9B9 1019 aaKnown RBP18.33■□□□□ 0.52
CAPN12-202ENST00000593700 RPAP2Q8IXW5 612 aaPredicted RBP18.33■□□□□ 0.52
CAPN12-202ENST00000593700 ZNF652Q9Y2D9 606 aa18.33■□□□□ 0.52
CAPN12-202ENST00000593700 KDM2BQ8NHM5 1336 aa18.32■□□□□ 0.52
CAPN12-202ENST00000593700 NEURL1BA8MQ27 555 aa18.32■□□□□ 0.52
CAPN12-202ENST00000593700 GNPATO15228 680 aa18.32■□□□□ 0.52
CAPN12-202ENST00000593700 RPS6KA4O75676 772 aa18.32■□□□□ 0.52
CAPN12-202ENST00000593700 PCDHB15Q9Y5E8 787 aa18.32■□□□□ 0.52
CAPN12-202ENST00000593700 CASZ1Q86V15 1759 aa18.32■□□□□ 0.52
CAPN12-202ENST00000593700 PNPLA7Q6ZV29 1317 aa18.31■□□□□ 0.52
CAPN12-202ENST00000593700 TUBGCP6Q96RT7 1819 aa18.31■□□□□ 0.52
CAPN12-202ENST00000593700 GRM8O00222 908 aa18.31■□□□□ 0.52
CAPN12-202ENST00000593700 CWF19L2Q2TBE0 894 aaKnown RBP18.31■□□□□ 0.52
CAPN12-202ENST00000593700 GIGYF2Q6Y7W6 1299 aaKnown RBP18.31■□□□□ 0.52
CAPN12-202ENST00000593700 C1orf115Q9H7X2 142 aa18.31■□□□□ 0.52
CAPN12-202ENST00000593700 CCDC191Q8NCU4 936 aa18.3■□□□□ 0.52
CAPN12-202ENST00000593700 MTFR1LQ9H019 292 aa18.3■□□□□ 0.52
CAPN12-202ENST00000593700 USP44Q9H0E7 712 aa18.3■□□□□ 0.52
CAPN12-202ENST00000593700 CWC25Q9NXE8 425 aaPredicted RBP18.3■□□□□ 0.52
CAPN12-202ENST00000593700 UTYO14607 1347 aa18.29■□□□□ 0.52
CAPN12-202ENST00000593700 IGKV5-2P06315 115 aa18.29■□□□□ 0.52
CAPN12-202ENST00000593700 TCIRG1Q13488 830 aa18.29■□□□□ 0.52
CAPN12-202ENST00000593700 GCKRQ14397 625 aa18.29■□□□□ 0.52
CAPN12-202ENST00000593700 TRAPPC3LQ5T215 181 aa18.29■□□□□ 0.52
CAPN12-202ENST00000593700 ANKRD44Q8N8A2 993 aa18.29■□□□□ 0.52
CAPN12-202ENST00000593700 SPON1Q9HCB6 807 aa18.29■□□□□ 0.52
CAPN12-202ENST00000593700 COL24A1Q17RW2 1714 aa18.29■□□□□ 0.52
CAPN12-202ENST00000593700 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.28■□□□□ 0.52
CAPN12-202ENST00000593700 CEP85Q6P2H3 762 aa18.28■□□□□ 0.52
CAPN12-202ENST00000593700 GCC1Q96CN9 775 aa18.28■□□□□ 0.52
CAPN12-202ENST00000593700 LRRFIP2Q9Y608 721 aaKnown RBP18.28■□□□□ 0.52
CAPN12-202ENST00000593700 LRP5O75197 1615 aa18.27■□□□□ 0.52
CAPN12-202ENST00000593700 ATP5J2-PTCD1G3V325 749 aa18.26■□□□□ 0.51
CAPN12-202ENST00000593700 RFC4P35249 363 aa18.26■□□□□ 0.51
CAPN12-202ENST00000593700 TRIM28Q13263 835 aaKnown RBP18.26■□□□□ 0.51
CAPN12-202ENST00000593700 COL23A1Q86Y22 540 aaPredicted RBP18.26■□□□□ 0.51
CAPN12-202ENST00000593700 ISCA1Q9BUE6 129 aa18.26■□□□□ 0.51
CAPN12-202ENST00000593700 TBC1D2BQ9UPU7 963 aa18.26■□□□□ 0.51
CAPN12-202ENST00000593700 NBPF7P0C2Y1 421 aaPredicted RBP18.25■□□□□ 0.51
CAPN12-202ENST00000593700 ZPR1O75312 459 aa18.24■□□□□ 0.51
CAPN12-202ENST00000593700 PHF14O94880 888 aa18.24■□□□□ 0.51
CAPN12-202ENST00000593700 IGHDP01880 384 aa18.24■□□□□ 0.51
CAPN12-202ENST00000593700 POLD1P28340 1107 aa18.24■□□□□ 0.51
CAPN12-202ENST00000593700 PARP10Q53GL7 1025 aa18.24■□□□□ 0.51
CAPN12-202ENST00000593700 CLEC4GQ6UXB4 293 aa18.24■□□□□ 0.51
CAPN12-202ENST00000593700 CAMTA2O94983 1202 aa18.23■□□□□ 0.51
CAPN12-202ENST00000593700 HSP90B1P14625 803 aaKnown RBP18.23■□□□□ 0.51
CAPN12-202ENST00000593700 UBE3BQ7Z3V4 1068 aa18.23■□□□□ 0.51
CAPN12-202ENST00000593700 NARFQ9UHQ1 456 aa18.23■□□□□ 0.51
CAPN12-202ENST00000593700 DDX60Q8IY21 1712 aaKnown RBP18.23■□□□□ 0.51
CAPN12-202ENST00000593700 ATP8B2P98198 1209 aa18.22■□□□□ 0.51
CAPN12-202ENST00000593700 SMC5Q8IY18 1101 aa18.22■□□□□ 0.51
CAPN12-202ENST00000593700 NLGN1Q8N2Q7 840 aa18.22■□□□□ 0.51
CAPN12-202ENST00000593700 ARHGEF1Q92888 912 aaKnown RBP18.22■□□□□ 0.51
CAPN12-202ENST00000593700 ZBTB7AO95365 584 aa18.21■□□□□ 0.51
CAPN12-202ENST00000593700 PCCAP05165 728 aaPredicted RBP18.21■□□□□ 0.51
CAPN12-202ENST00000593700 MTX1Q13505 466 aa18.21■□□□□ 0.51
CAPN12-202ENST00000593700 HLFQ16534 295 aa18.21■□□□□ 0.51
CAPN12-202ENST00000593700 CDHR2Q9BYE9 1310 aa18.21■□□□□ 0.51
CAPN12-202ENST00000593700 GPTP24298 496 aa18.2■□□□□ 0.5
CAPN12-202ENST00000593700 PPP1R42Q7Z4L9 355 aa18.2■□□□□ 0.5
CAPN12-202ENST00000593700 NLRP10Q86W26 655 aa18.2■□□□□ 0.5
CAPN12-202ENST00000593700 ZBTB38Q8NAP3 1195 aaPredicted RBP18.2■□□□□ 0.5
CAPN12-202ENST00000593700 SUCLG2Q96I99 432 aa18.2■□□□□ 0.5
CAPN12-202ENST00000593700 USP42Q9H9J4 1324 aaKnown RBP18.2■□□□□ 0.5
CAPN12-202ENST00000593700 H7C1W4 665 aa18.19■□□□□ 0.5
CAPN12-202ENST00000593700 SRGAP3O43295 1099 aa18.19■□□□□ 0.5
CAPN12-202ENST00000593700 HSP90AB4PQ58FF6 505 aa18.19■□□□□ 0.5
CAPN12-202ENST00000593700 SIRT2Q8IXJ6 389 aa18.19■□□□□ 0.5
CAPN12-202ENST00000593700 ZNF34Q8IZ26 560 aa18.19■□□□□ 0.5
CAPN12-202ENST00000593700 SPRYD3Q8NCJ5 442 aa18.19■□□□□ 0.5
CAPN12-202ENST00000593700 NIP7Q9Y221 180 aaKnown RBP eCLIP18.19■□□□□ 0.5
CAPN12-202ENST00000593700 SSH3Q8TE77 659 aa18.18■□□□□ 0.5
CAPN12-202ENST00000593700 PDGFDQ9GZP0 370 aaPredicted RBP18.18■□□□□ 0.5
CAPN12-202ENST00000593700 BICC1Q9H694 974 aaKnown RBP18.18■□□□□ 0.5
CAPN12-202ENST00000593700 DCTPP1Q9H773 170 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms