RNA–Protein interactions for RNA: ENST00000593639.5

SRRM1-221, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-221ENST00000593639 SNRPA1P09661 255 aaKnown RBP12.38□□□□□ -0.43
SRRM1-221ENST00000593639 MAP2K2P36507 400 aa12.38□□□□□ -0.43
SRRM1-221ENST00000593639 USP50Q70EL3 339 aaPredicted RBP12.38□□□□□ -0.43
SRRM1-221ENST00000593639 MCOLN1Q9GZU1 580 aa12.38□□□□□ -0.43
SRRM1-221ENST00000593639 THSD7BQ9C0I4 1608 aa12.37□□□□□ -0.43
SRRM1-221ENST00000593639 LTBP1Q14766 1721 aa12.37□□□□□ -0.43
SRRM1-221ENST00000593639 GTF2E1P29083 439 aaPredicted RBP12.37□□□□□ -0.43
SRRM1-221ENST00000593639 CC2D2BQ6DHV5 1058 aa12.37□□□□□ -0.43
SRRM1-221ENST00000593639 SAPCD2Q86UD0 394 aa12.37□□□□□ -0.43
SRRM1-221ENST00000593639 NUTM1Q86Y26 1132 aa12.37□□□□□ -0.43
SRRM1-221ENST00000593639 LARGE2Q8N3Y3 721 aa12.37□□□□□ -0.43
SRRM1-221ENST00000593639 CFAP44Q96MT7 982 aa12.37□□□□□ -0.43
SRRM1-221ENST00000593639 BCORQ6W2J9 1755 aa12.37□□□□□ -0.43
SRRM1-221ENST00000593639 KIF7Q2M1P5 1343 aa12.37□□□□□ -0.43
SRRM1-221ENST00000593639 PRKAR2BP31323 418 aa12.36□□□□□ -0.43
SRRM1-221ENST00000593639 CACNA1SQ13698 1873 aa12.36□□□□□ -0.43
SRRM1-221ENST00000593639 CELF2O95319 508 aaKnown RBP12.35□□□□□ -0.43
SRRM1-221ENST00000593639 HOXA10P31260 410 aaPredicted RBP12.35□□□□□ -0.43
SRRM1-221ENST00000593639 TRIM26Q12899 539 aaPredicted RBP12.35□□□□□ -0.43
SRRM1-221ENST00000593639 MCM10Q7L590 875 aa12.35□□□□□ -0.43
SRRM1-221ENST00000593639 RSPH6AQ9H0K4 717 aa12.35□□□□□ -0.43
SRRM1-221ENST00000593639 ADARB2Q9NS39 739 aaKnown RBP12.35□□□□□ -0.43
SRRM1-221ENST00000593639 CLSPNQ9HAW4 1339 aa12.35□□□□□ -0.43
SRRM1-221ENST00000593639 SIPA1L3O60292 1781 aaPredicted RBP12.34□□□□□ -0.43
SRRM1-221ENST00000593639 CA12O43570 354 aa12.34□□□□□ -0.43
SRRM1-221ENST00000593639 BRPF1P55201 1214 aaPredicted RBP12.34□□□□□ -0.43
SRRM1-221ENST00000593639 CNGB1Q14028 1251 aaPredicted RBP12.34□□□□□ -0.43
SRRM1-221ENST00000593639 NIM1KQ8IY84 436 aa12.34□□□□□ -0.43
SRRM1-221ENST00000593639 RPGRQ92834 1020 aaKnown RBP12.34□□□□□ -0.43
SRRM1-221ENST00000593639 NYXQ9GZU5 481 aa12.34□□□□□ -0.43
SRRM1-221ENST00000593639 GPRC5DQ9NZD1 345 aa12.34□□□□□ -0.43
SRRM1-221ENST00000593639 TNRC18O15417 2968 aaPredicted RBP12.34□□□□□ -0.43
SRRM1-221ENST00000593639 TCERG1O14776 1098 aaKnown RBP12.33□□□□□ -0.44
SRRM1-221ENST00000593639 PPEF1O14829 653 aaPredicted RBP12.33□□□□□ -0.44
SRRM1-221ENST00000593639 DCTN1Q14203 1278 aa12.33□□□□□ -0.44
SRRM1-221ENST00000593639 C3orf67Q6ZVT6 689 aa12.33□□□□□ -0.44
SRRM1-221ENST00000593639 NGEFQ8N5V2 710 aa12.33□□□□□ -0.44
SRRM1-221ENST00000593639 GLIS2Q9BZE0 524 aaPredicted RBP12.33□□□□□ -0.44
SRRM1-221ENST00000593639 UBN2Q6ZU65 1347 aa12.33□□□□□ -0.44
SRRM1-221ENST00000593639 RIC1Q4ADV7 1423 aa12.32□□□□□ -0.44
SRRM1-221ENST00000593639 PPIP5K2O43314 1243 aa12.32□□□□□ -0.44
SRRM1-221ENST00000593639 GPTP24298 496 aa12.32□□□□□ -0.44
SRRM1-221ENST00000593639 CXCL9Q07325 125 aa12.32□□□□□ -0.44
SRRM1-221ENST00000593639 DGKZQ13574 1117 aa12.32□□□□□ -0.44
SRRM1-221ENST00000593639 AOC3Q16853 763 aa12.32□□□□□ -0.44
SRRM1-221ENST00000593639 GRIPAP1Q4V328 841 aa12.32□□□□□ -0.44
SRRM1-221ENST00000593639 CIAPIN1Q6FI81 312 aa12.32□□□□□ -0.44
SRRM1-221ENST00000593639 HHIPL1Q96JK4 782 aa12.32□□□□□ -0.44
SRRM1-221ENST00000593639 ZIC5Q96T25 663 aa12.32□□□□□ -0.44
SRRM1-221ENST00000593639 NPC1L1Q9UHC9 1359 aa12.31□□□□□ -0.44
SRRM1-221ENST00000593639 ERVV-1B6SEH8 477 aa12.31□□□□□ -0.44
SRRM1-221ENST00000593639 GMPSP49915 693 aaPredicted RBP12.31□□□□□ -0.44
SRRM1-221ENST00000593639 SUSD4Q5VX71 490 aa12.31□□□□□ -0.44
SRRM1-221ENST00000593639 TTLL7Q6ZT98 887 aa12.31□□□□□ -0.44
SRRM1-221ENST00000593639 RTF1Q92541 710 aaKnown RBP12.31□□□□□ -0.44
SRRM1-221ENST00000593639 CRAMP1Q96RY5 1269 aa12.31□□□□□ -0.44
SRRM1-221ENST00000593639 PCGF6Q9BYE7 350 aa12.31□□□□□ -0.44
SRRM1-221ENST00000593639 ZNF408Q9H9D4 720 aa12.31□□□□□ -0.44
SRRM1-221ENST00000593639 MIS18AQ9NYP9 233 aa12.31□□□□□ -0.44
SRRM1-221ENST00000593639 PGAP2Q9UHJ9 254 aa12.31□□□□□ -0.44
SRRM1-221ENST00000593639 MAP3K15Q6ZN16 1313 aa12.31□□□□□ -0.44
SRRM1-221ENST00000593639 HIRAP54198 1017 aaPredicted RBP12.3□□□□□ -0.44
SRRM1-221ENST00000593639 RBM17Q96I25 401 aaKnown RBP12.3□□□□□ -0.44
SRRM1-221ENST00000593639 ZNRF3Q9ULT6 936 aa12.3□□□□□ -0.44
SRRM1-221ENST00000593639 IBTKQ9P2D0 1353 aaPredicted RBP12.3□□□□□ -0.44
SRRM1-221ENST00000593639 NTSR2O95665 410 aa12.29□□□□□ -0.44
SRRM1-221ENST00000593639 TRPM4Q8TD43 1214 aa12.29□□□□□ -0.44
SRRM1-221ENST00000593639 ATP6V0A2Q9Y487 856 aa12.29□□□□□ -0.44
SRRM1-221ENST00000593639 SHTN1A0MZ66 631 aa12.28□□□□□ -0.44
SRRM1-221ENST00000593639 NOGQ13253 232 aa12.28□□□□□ -0.44
SRRM1-221ENST00000593639 TAF7Q15545 349 aaPredicted RBP12.28□□□□□ -0.44
SRRM1-221ENST00000593639 DLK2Q6UY11 383 aa12.28□□□□□ -0.44
SRRM1-221ENST00000593639 KIF6Q6ZMV9 814 aa12.28□□□□□ -0.44
SRRM1-221ENST00000593639 ZNF34Q8IZ26 560 aa12.28□□□□□ -0.44
SRRM1-221ENST00000593639 ZC3H15Q8WU90 426 aaKnown RBP12.28□□□□□ -0.44
SRRM1-221ENST00000593639 RTFDC1Q9BY42 306 aaPredicted RBP12.28□□□□□ -0.44
SRRM1-221ENST00000593639 VPS33BQ9H267 617 aa12.28□□□□□ -0.44
SRRM1-221ENST00000593639 ZBTB3Q9H5J0 574 aa12.28□□□□□ -0.44
SRRM1-221ENST00000593639 RRP7AQ9Y3A4 280 aaKnown RBP12.28□□□□□ -0.44
SRRM1-221ENST00000593639 PDE4DIPQ5VU43 2346 aa12.27□□□□□ -0.44
SRRM1-221ENST00000593639 RAD17O75943 681 aa12.27□□□□□ -0.45
SRRM1-221ENST00000593639 U2AF1L5P0DN76 240 aaPredicted RBP12.27□□□□□ -0.45
SRRM1-221ENST00000593639 SOX10P56693 466 aa12.27□□□□□ -0.45
SRRM1-221ENST00000593639 U2AF1Q01081 240 aaKnown RBP eCLIP12.27□□□□□ -0.451e-12■■□□□ 14.4
SRRM1-221ENST00000593639 CDC37L1Q7L3B6 337 aa12.27□□□□□ -0.45
SRRM1-221ENST00000593639 HTATSF1O43719 755 aaKnown RBP12.26□□□□□ -0.45
SRRM1-221ENST00000593639 MYL6BP14649 208 aa12.26□□□□□ -0.45
SRRM1-221ENST00000593639 HUNKP57058 714 aa12.26□□□□□ -0.45
SRRM1-221ENST00000593639 USP48Q86UV5 1035 aa12.26□□□□□ -0.45
SRRM1-221ENST00000593639 BCL2L13Q9BXK5 485 aa12.26□□□□□ -0.45
SRRM1-221ENST00000593639 TMX4Q9H1E5 349 aaPredicted RBP12.26□□□□□ -0.45
SRRM1-221ENST00000593639 ABCC4O15439 1325 aa12.26□□□□□ -0.45
SRRM1-221ENST00000593639 CDHR2Q9BYE9 1310 aa12.26□□□□□ -0.45
SRRM1-221ENST00000593639 FAM155AB1AL88 458 aaPredicted RBP12.25□□□□□ -0.45
SRRM1-221ENST00000593639 KIAA2012Q0VF49 1180 aa12.25□□□□□ -0.45
SRRM1-221ENST00000593639 DPP8Q6V1X1 898 aaPredicted RBP12.25□□□□□ -0.45
SRRM1-221ENST00000593639 SUPT20HQ8NEM7 779 aa12.25□□□□□ -0.45
SRRM1-221ENST00000593639 CFAP53Q96M91 514 aa12.25□□□□□ -0.45
SRRM1-221ENST00000593639 NLRP3Q96P20 1036 aa12.25□□□□□ -0.45
SRRM1-221ENST00000593639 CNOT7Q9UIV1 285 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms