RNA–Protein interactions for RNA: ENST00000593236.1

LDLRAD4-219, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 4

Gene LDLRAD4, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-219ENST00000593236 ZBTB3Q9H5J0 574 aa16.37■□□□□ 0.21
LDLRAD4-219ENST00000593236 SUPT16HQ9Y5B9 1047 aaKnown RBP16.37■□□□□ 0.21
LDLRAD4-219ENST00000593236 BCAR3O75815 825 aa16.36■□□□□ 0.21
LDLRAD4-219ENST00000593236 VEGFAP15692 232 aaPredicted RBP16.36■□□□□ 0.21
LDLRAD4-219ENST00000593236 FLIIQ13045 1269 aa16.36■□□□□ 0.21
LDLRAD4-219ENST00000593236 PRR5LQ6MZQ0 368 aa16.36■□□□□ 0.21
LDLRAD4-219ENST00000593236 ZNF622Q969S3 477 aaKnown RBP eCLIP16.36■□□□□ 0.21
LDLRAD4-219ENST00000593236 BRIP1Q9BX63 1249 aa16.36■□□□□ 0.21
LDLRAD4-219ENST00000593236 GTF3C3Q9Y5Q9 886 aa16.36■□□□□ 0.21
LDLRAD4-219ENST00000593236 SCN7AQ01118 1682 aa16.35■□□□□ 0.21
LDLRAD4-219ENST00000593236 POTECB2RU33 542 aa16.35■□□□□ 0.21
LDLRAD4-219ENST00000593236 CAMTA2O94983 1202 aa16.35■□□□□ 0.21
LDLRAD4-219ENST00000593236 C21orf2O43822 256 aa16.34■□□□□ 0.21
LDLRAD4-219ENST00000593236 PDE6BP35913 854 aa16.34■□□□□ 0.21
LDLRAD4-219ENST00000593236 FKBP5Q13451 457 aaPredicted RBP16.34■□□□□ 0.21
LDLRAD4-219ENST00000593236 ZNF219Q9P2Y4 722 aaPredicted RBP16.34■□□□□ 0.21
LDLRAD4-219ENST00000593236 RCAN3Q9UKA8 241 aa16.34■□□□□ 0.21
LDLRAD4-219ENST00000593236 PDZRN3Q9UPQ7 1066 aa16.34■□□□□ 0.21
LDLRAD4-219ENST00000593236 MAP3K15Q6ZN16 1313 aa16.34■□□□□ 0.21
LDLRAD4-219ENST00000593236 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.21
LDLRAD4-219ENST00000593236 BCORQ6W2J9 1755 aa16.33■□□□□ 0.21
LDLRAD4-219ENST00000593236 HLFQ16534 295 aa16.33■□□□□ 0.2
LDLRAD4-219ENST00000593236 DDX58O95786 925 aaKnown RBP16.32■□□□□ 0.2
LDLRAD4-219ENST00000593236 COL11A2P13942 1736 aaPredicted RBP16.32■□□□□ 0.2
LDLRAD4-219ENST00000593236 FER1L6Q2WGJ9 1857 aa16.32■□□□□ 0.2
LDLRAD4-219ENST00000593236 RIC3Q7Z5B4 369 aa16.32■□□□□ 0.2
LDLRAD4-219ENST00000593236 SETDB2Q96T68 719 aa16.32■□□□□ 0.2
LDLRAD4-219ENST00000593236 NOB1Q9ULX3 412 aaKnown RBP16.32■□□□□ 0.2
LDLRAD4-219ENST00000593236 KIF16BQ96L93 1317 aa16.31■□□□□ 0.2
LDLRAD4-219ENST00000593236 PI4KAP2A4QPH2 592 aa16.31■□□□□ 0.2
LDLRAD4-219ENST00000593236 NEFLP07196 543 aa16.31■□□□□ 0.2
LDLRAD4-219ENST00000593236 COL13A1Q5TAT6 717 aaPredicted RBP16.31■□□□□ 0.2
LDLRAD4-219ENST00000593236 ANKRD13DQ6ZTN6 518 aa16.31■□□□□ 0.2
LDLRAD4-219ENST00000593236 PI4KAP1Q8N8J0 262 aa16.31■□□□□ 0.2
LDLRAD4-219ENST00000593236 PLBD2Q8NHP8 589 aa16.31■□□□□ 0.2
LDLRAD4-219ENST00000593236 FRAT1Q92837 279 aaPredicted RBP16.31■□□□□ 0.2
LDLRAD4-219ENST00000593236 DICER1Q9UPY3 1922 aaKnown RBP16.31■□□□□ 0.2
LDLRAD4-219ENST00000593236 RNF123Q5XPI4 1314 aa16.3■□□□□ 0.2
LDLRAD4-219ENST00000593236 ERVV-1B6SEH8 477 aa16.3■□□□□ 0.2
LDLRAD4-219ENST00000593236 F6X3S4 739 aa16.3■□□□□ 0.2
LDLRAD4-219ENST00000593236 DPY19L2Q6NUT2 758 aa16.3■□□□□ 0.2
LDLRAD4-219ENST00000593236 KSR2Q6VAB6 950 aa16.3■□□□□ 0.2
LDLRAD4-219ENST00000593236 ZNF652Q9Y2D9 606 aa16.3■□□□□ 0.2
LDLRAD4-219ENST00000593236 MAP3K2Q9Y2U5 619 aa16.3■□□□□ 0.2
LDLRAD4-219ENST00000593236 SLX4Q8IY92 1834 aa16.29■□□□□ 0.2
LDLRAD4-219ENST00000593236 ARFGEF2Q9Y6D5 1785 aa16.29■□□□□ 0.2
LDLRAD4-219ENST00000593236 PTPRCP08575 1304 aa16.29■□□□□ 0.2
LDLRAD4-219ENST00000593236 SRGNP10124 158 aa16.29■□□□□ 0.2
LDLRAD4-219ENST00000593236 GPTP24298 496 aa16.29■□□□□ 0.2
LDLRAD4-219ENST00000593236 BRPF1P55201 1214 aaPredicted RBP16.29■□□□□ 0.2
LDLRAD4-219ENST00000593236 ERFEQ4G0M1 354 aa16.29■□□□□ 0.2
LDLRAD4-219ENST00000593236 CNBD1Q8NA66 436 aa16.29■□□□□ 0.2
LDLRAD4-219ENST00000593236 MYD88Q99836 296 aa16.29■□□□□ 0.2
LDLRAD4-219ENST00000593236 CACNA1FO60840 1977 aa16.29■□□□□ 0.2
LDLRAD4-219ENST00000593236 LTBP3Q9NS15 1303 aa16.28■□□□□ 0.2
LDLRAD4-219ENST00000593236 STYK1Q6J9G0 422 aa16.28■□□□□ 0.2
LDLRAD4-219ENST00000593236 GIGYF2Q6Y7W6 1299 aaKnown RBP16.28■□□□□ 0.2
LDLRAD4-219ENST00000593236 CNKSR1Q969H4 720 aa16.28■□□□□ 0.2
LDLRAD4-219ENST00000593236 TNNQ9UQP3 1299 aa16.28■□□□□ 0.2
LDLRAD4-219ENST00000593236 CACNA1SQ13698 1873 aa16.27■□□□□ 0.2
LDLRAD4-219ENST00000593236 ATP5J2-PTCD1G3V325 749 aa16.27■□□□□ 0.2
LDLRAD4-219ENST00000593236 ST5P78524 1137 aa16.27■□□□□ 0.2
LDLRAD4-219ENST00000593236 SLC4A10Q6U841 1118 aa16.27■□□□□ 0.2
LDLRAD4-219ENST00000593236 DNAAF4Q8WXU2 420 aa16.27■□□□□ 0.2
LDLRAD4-219ENST00000593236 MASTLQ96GX5 879 aa16.27■□□□□ 0.2
LDLRAD4-219ENST00000593236 TAOK3Q9H2K8 898 aa16.27■□□□□ 0.2
LDLRAD4-219ENST00000593236 NIP7Q9Y221 180 aaKnown RBP eCLIP16.27■□□□□ 0.2
LDLRAD4-219ENST00000593236 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
LDLRAD4-219ENST00000593236 NPHP1O15259 732 aa16.26■□□□□ 0.19
LDLRAD4-219ENST00000593236 PLIN1O60240 522 aa16.26■□□□□ 0.19
LDLRAD4-219ENST00000593236 TCIRG1Q13488 830 aa16.26■□□□□ 0.19
LDLRAD4-219ENST00000593236 PRPF40BQ6NWY9 871 aaKnown RBP16.26■□□□□ 0.19
LDLRAD4-219ENST00000593236 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
LDLRAD4-219ENST00000593236 METTL22Q9BUU2 404 aaPredicted RBP16.26■□□□□ 0.19
LDLRAD4-219ENST00000593236 API5Q9BZZ5 524 aaKnown RBP16.26■□□□□ 0.19
LDLRAD4-219ENST00000593236 NUP98P52948 1817 aa16.26■□□□□ 0.19
LDLRAD4-219ENST00000593236 UBN2Q6ZU65 1347 aa16.25■□□□□ 0.19
LDLRAD4-219ENST00000593236 IPO8O15397 1037 aaKnown RBP16.25■□□□□ 0.19
LDLRAD4-219ENST00000593236 DDNO94850 711 aaPredicted RBP16.25■□□□□ 0.19
LDLRAD4-219ENST00000593236 TRIM27P14373 513 aa16.25■□□□□ 0.19
LDLRAD4-219ENST00000593236 HSP90AB3PQ58FF7 597 aa16.25■□□□□ 0.19
LDLRAD4-219ENST00000593236 ZKSCAN2Q63HK3 967 aa16.25■□□□□ 0.19
LDLRAD4-219ENST00000593236 C7orf43Q8WVR3 580 aa16.25■□□□□ 0.19
LDLRAD4-219ENST00000593236 RGL2O15211 777 aa16.24■□□□□ 0.19
LDLRAD4-219ENST00000593236 NEXNQ0ZGT2 675 aa16.24■□□□□ 0.19
LDLRAD4-219ENST00000593236 ATF7IPQ6VMQ6 1270 aa16.24■□□□□ 0.19
LDLRAD4-219ENST00000593236 NBPF5PQ86XG9 351 aaPredicted RBP16.24■□□□□ 0.19
LDLRAD4-219ENST00000593236 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
LDLRAD4-219ENST00000593236 CLUAP1Q96AJ1 413 aa16.24■□□□□ 0.19
LDLRAD4-219ENST00000593236 ANKRD36CQ5JPF3 1778 aa16.23■□□□□ 0.19
LDLRAD4-219ENST00000593236 KLRG2A4D1S0 409 aaPredicted RBP16.23■□□□□ 0.19
LDLRAD4-219ENST00000593236 IGKV5-2P06315 115 aa16.23■□□□□ 0.19
LDLRAD4-219ENST00000593236 POTEIP0CG38 1075 aa16.23■□□□□ 0.19
LDLRAD4-219ENST00000593236 POTEJP0CG39 1038 aa16.23■□□□□ 0.19
LDLRAD4-219ENST00000593236 RRP1P56182 461 aaKnown RBP16.23■□□□□ 0.19
LDLRAD4-219ENST00000593236 CWF19L2Q2TBE0 894 aaKnown RBP16.23■□□□□ 0.19
LDLRAD4-219ENST00000593236 SOGA3Q5TF21 947 aa16.23■□□□□ 0.19
LDLRAD4-219ENST00000593236 ARHGAP45Q92619 1136 aa16.23■□□□□ 0.19
LDLRAD4-219ENST00000593236 ISCA1Q9BUE6 129 aa16.23■□□□□ 0.19
LDLRAD4-219ENST00000593236 BEND3Q5T5X7 828 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms