RNA–Protein interactions for RNA: ENST00000593129.1

RTN2-213, Transcript of reticulon 2, humanhuman

TSL 2

Gene RTN2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN2-213ENST00000593129 PARP10Q53GL7 1025 aa13.11□□□□□ -0.31
RTN2-213ENST00000593129 SNED1Q8TER0 1413 aa13.11□□□□□ -0.31
RTN2-213ENST00000593129 TNRC6CQ9HCJ0 1690 aaKnown RBP13.11□□□□□ -0.31
RTN2-213ENST00000593129 TCIRG1Q13488 830 aa13.1□□□□□ -0.31
RTN2-213ENST00000593129 DPY19L2Q6NUT2 758 aa13.1□□□□□ -0.31
RTN2-213ENST00000593129 RTKN2Q8IZC4 609 aa13.1□□□□□ -0.31
RTN2-213ENST00000593129 MBIPQ9NS73 344 aa13.1□□□□□ -0.31
RTN2-213ENST00000593129 DDNO94850 711 aaPredicted RBP13.09□□□□□ -0.31
RTN2-213ENST00000593129 HOXB7P09629 217 aa13.09□□□□□ -0.31
RTN2-213ENST00000593129 AIMP1Q12904 312 aaKnown RBP13.09□□□□□ -0.31
RTN2-213ENST00000593129 PPP1R42Q7Z4L9 355 aa13.09□□□□□ -0.31
RTN2-213ENST00000593129 NLRP10Q86W26 655 aa13.09□□□□□ -0.31
RTN2-213ENST00000593129 TIAM2Q8IVF5 1701 aa13.09□□□□□ -0.31
RTN2-213ENST00000593129 SYNE4Q8N205 404 aa13.09□□□□□ -0.31
RTN2-213ENST00000593129 CRAMP1Q96RY5 1269 aa13.09□□□□□ -0.31
RTN2-213ENST00000593129 UTP14AQ9BVJ6 771 aaKnown RBP13.09□□□□□ -0.31
RTN2-213ENST00000593129 ZNF277Q9NRM2 450 aaPredicted RBP13.09□□□□□ -0.31
RTN2-213ENST00000593129 CHPF2Q9P2E5 772 aa13.09□□□□□ -0.31
RTN2-213ENST00000593129 WDR90Q96KV7 1748 aa13.08□□□□□ -0.32
RTN2-213ENST00000593129 DUSP27Q5VZP5 1158 aa13.08□□□□□ -0.32
RTN2-213ENST00000593129 SLC51AQ86UW1 340 aa13.08□□□□□ -0.32
RTN2-213ENST00000593129 SMC1BQ8NDV3 1235 aa13.08□□□□□ -0.32
RTN2-213ENST00000593129 ZEB1P37275 1124 aaPredicted RBP13.07□□□□□ -0.32
RTN2-213ENST00000593129 HTRA3P83110 453 aa13.07□□□□□ -0.32
RTN2-213ENST00000593129 HSP90AB3PQ58FF7 597 aa13.07□□□□□ -0.32
RTN2-213ENST00000593129 HDGFL1Q5TGJ6 251 aa13.07□□□□□ -0.32
RTN2-213ENST00000593129 CC2D2BQ6DHV5 1058 aa13.07□□□□□ -0.32
RTN2-213ENST00000593129 RPGRQ92834 1020 aaKnown RBP13.07□□□□□ -0.32
RTN2-213ENST00000593129 NLRP3Q96P20 1036 aa13.07□□□□□ -0.32
RTN2-213ENST00000593129 PSMD1Q99460 953 aa13.07□□□□□ -0.32
RTN2-213ENST00000593129 IFT57Q9NWB7 429 aa13.07□□□□□ -0.32
RTN2-213ENST00000593129 DBF4Q9UBU7 674 aaPredicted RBP13.07□□□□□ -0.32
RTN2-213ENST00000593129 FZD9O00144 591 aa13.06□□□□□ -0.32
RTN2-213ENST00000593129 ANKRD13DQ6ZTN6 518 aa13.06□□□□□ -0.32
RTN2-213ENST00000593129 PLBD2Q8NHP8 589 aa13.06□□□□□ -0.32
RTN2-213ENST00000593129 RBM17Q96I25 401 aaKnown RBP13.06□□□□□ -0.32
RTN2-213ENST00000593129 L3MBTL3Q96JM7 780 aaPredicted RBP13.06□□□□□ -0.32
RTN2-213ENST00000593129 ISCA1Q9BUE6 129 aa13.06□□□□□ -0.32
RTN2-213ENST00000593129 RNF123Q5XPI4 1314 aa13.06□□□□□ -0.32
RTN2-213ENST00000593129 HCLS1P14317 486 aaPredicted RBP13.05□□□□□ -0.32
RTN2-213ENST00000593129 IARSP41252 1262 aaKnown RBP13.05□□□□□ -0.32
RTN2-213ENST00000593129 GNAI1P63096 354 aa13.05□□□□□ -0.32
RTN2-213ENST00000593129 C8orf58Q8NAV2 365 aa13.05□□□□□ -0.32
RTN2-213ENST00000593129 HYPKQ9NX55 129 aa13.05□□□□□ -0.32
RTN2-213ENST00000593129 ZNF541Q9H0D2 1346 aa13.05□□□□□ -0.32
RTN2-213ENST00000593129 ELL2O00472 640 aaPredicted RBP13.04□□□□□ -0.32
RTN2-213ENST00000593129 POTEIP0CG38 1075 aa13.04□□□□□ -0.32
RTN2-213ENST00000593129 POTEJP0CG39 1038 aa13.04□□□□□ -0.32
RTN2-213ENST00000593129 GRIPAP1Q4V328 841 aa13.04□□□□□ -0.32
RTN2-213ENST00000593129 TRMT112Q9UI30 125 aaKnown RBP13.04□□□□□ -0.32
RTN2-213ENST00000593129 COL4A5P29400 1685 aa13.03□□□□□ -0.32
RTN2-213ENST00000593129 ZNF316A6NFI3 1004 aaPredicted RBP13.03□□□□□ -0.32
RTN2-213ENST00000593129 TCERG1O14776 1098 aaKnown RBP13.03□□□□□ -0.32
RTN2-213ENST00000593129 PPEF1O14829 653 aaPredicted RBP13.03□□□□□ -0.32
RTN2-213ENST00000593129 CALD1Q05682 793 aaKnown RBP13.03□□□□□ -0.32
RTN2-213ENST00000593129 TRIM28Q13263 835 aaKnown RBP13.03□□□□□ -0.32
RTN2-213ENST00000593129 ZNF428Q96B54 188 aa13.03□□□□□ -0.32
RTN2-213ENST00000593129 TAF1DQ9H5J8 278 aaPredicted RBP13.03□□□□□ -0.32
RTN2-213ENST00000593129 ATP6V0A2Q9Y487 856 aa13.03□□□□□ -0.32
RTN2-213ENST00000593129 ABCC4O15439 1325 aa13.03□□□□□ -0.32
RTN2-213ENST00000593129 SH3TC1Q8TE82 1336 aa13.03□□□□□ -0.32
RTN2-213ENST00000593129 ANKRD36CQ5JPF3 1778 aa13.02□□□□□ -0.32
RTN2-213ENST00000593129 ATP5J2-PTCD1G3V325 749 aa13.02□□□□□ -0.33
RTN2-213ENST00000593129 BBOX1O75936 387 aa13.02□□□□□ -0.33
RTN2-213ENST00000593129 CCDC27Q2M243 656 aa13.02□□□□□ -0.33
RTN2-213ENST00000593129 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
RTN2-213ENST00000593129 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
RTN2-213ENST00000593129 PHAXQ9H814 394 aaKnown RBP13.02□□□□□ -0.33
RTN2-213ENST00000593129 SF3B3Q15393 1217 aaKnown RBP13.01□□□□□ -0.33
RTN2-213ENST00000593129 SP8Q8IXZ3 490 aa13.01□□□□□ -0.33
RTN2-213ENST00000593129 JMYQ8N9B5 988 aa13.01□□□□□ -0.33
RTN2-213ENST00000593129 KLRG1Q96E93 195 aa13.01□□□□□ -0.33
RTN2-213ENST00000593129 FAM89AQ96GI7 184 aa13.01□□□□□ -0.33
RTN2-213ENST00000593129 RTFDC1Q9BY42 306 aaPredicted RBP13.01□□□□□ -0.33
RTN2-213ENST00000593129 LAMB2P55268 1798 aa13□□□□□ -0.33
RTN2-213ENST00000593129 IQCA1LA6NCM1 817 aa13□□□□□ -0.33
RTN2-213ENST00000593129 NCBP3Q53F19 620 aaKnown RBP13□□□□□ -0.33
RTN2-213ENST00000593129 WWC1Q8IX03 1113 aa13□□□□□ -0.33
RTN2-213ENST00000593129 GPC2Q8N158 579 aa13□□□□□ -0.33
RTN2-213ENST00000593129 JDP2Q8WYK2 163 aa13□□□□□ -0.33
RTN2-213ENST00000593129 VPS33BQ9H267 617 aa13□□□□□ -0.33
RTN2-213ENST00000593129 SCN4AP35499 1836 aa12.99□□□□□ -0.33
RTN2-213ENST00000593129 ITGBL1O95965 494 aaPredicted RBP12.99□□□□□ -0.33
RTN2-213ENST00000593129 GRAPQ13588 217 aa12.99□□□□□ -0.33
RTN2-213ENST00000593129 LARGE2Q8N3Y3 721 aa12.99□□□□□ -0.33
RTN2-213ENST00000593129 GRAPLQ8TC17 118 aaPredicted RBP12.99□□□□□ -0.33
RTN2-213ENST00000593129 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
RTN2-213ENST00000593129 TAF1P21675 1872 aa12.99□□□□□ -0.33
RTN2-213ENST00000593129 DDX46Q7L014 1031 aaKnown RBP12.98□□□□□ -0.33
RTN2-213ENST00000593129 RIC3Q7Z5B4 369 aa12.98□□□□□ -0.33
RTN2-213ENST00000593129 LDHDQ86WU2 507 aa12.98□□□□□ -0.33
RTN2-213ENST00000593129 HACL1Q9UJ83 578 aa12.98□□□□□ -0.33
RTN2-213ENST00000593129 PASKQ96RG2 1323 aa12.97□□□□□ -0.33
RTN2-213ENST00000593129 EPHX2P34913 555 aa12.97□□□□□ -0.33
RTN2-213ENST00000593129 RTL5Q5HYW3 569 aaPredicted RBP12.97□□□□□ -0.33
RTN2-213ENST00000593129 CCDC30Q5VVM6 783 aa12.97□□□□□ -0.33
RTN2-213ENST00000593129 MPNDQ8N594 471 aa12.97□□□□□ -0.33
RTN2-213ENST00000593129 MRS2Q9HD23 443 aa12.97□□□□□ -0.33
RTN2-213ENST00000593129 DDX60Q8IY21 1712 aaKnown RBP12.96□□□□□ -0.33
RTN2-213ENST00000593129 IL16Q14005 1332 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms