RNA–Protein interactions for RNA: ENST00000592965.2

MBD3-211, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-211ENST00000592965 SNED1Q8TER0 1413 aa30.34■■■□□ 2.45
MBD3-211ENST00000592965 XAGE3Q8WTP9 111 aa30.34■■■□□ 2.45
MBD3-211ENST00000592965 APAF1O14727 1248 aa30.33■■■□□ 2.45
MBD3-211ENST00000592965 HSP90AB3PQ58FF7 597 aa30.33■■■□□ 2.45
MBD3-211ENST00000592965 OLFM4Q6UX06 510 aa30.33■■■□□ 2.45
MBD3-211ENST00000592965 RPGRQ92834 1020 aaKnown RBP30.33■■■□□ 2.45
MBD3-211ENST00000592965 RNF123Q5XPI4 1314 aa30.32■■■□□ 2.44
MBD3-211ENST00000592965 HDGFL1Q5TGJ6 251 aa30.32■■■□□ 2.44
MBD3-211ENST00000592965 SMC1BQ8NDV3 1235 aa30.32■■■□□ 2.44
MBD3-211ENST00000592965 ZNF853P0CG23 659 aa30.31■■■□□ 2.44
MBD3-211ENST00000592965 UTP14AQ9BVJ6 771 aaKnown RBP30.31■■■□□ 2.44
MBD3-211ENST00000592965 CHPF2Q9P2E5 772 aa30.31■■■□□ 2.44
MBD3-211ENST00000592965 POTECB2RU33 542 aa30.3■■■□□ 2.44
MBD3-211ENST00000592965 AIMP1Q12904 312 aaKnown RBP30.3■■■□□ 2.44
MBD3-211ENST00000592965 MBIPQ9NS73 344 aa30.3■■■□□ 2.44
MBD3-211ENST00000592965 LAMB2P55268 1798 aa30.29■■■□□ 2.44
MBD3-211ENST00000592965 CALD1Q05682 793 aaKnown RBP30.29■■■□□ 2.44
MBD3-211ENST00000592965 CC2D2BQ6DHV5 1058 aa30.29■■■□□ 2.44
MBD3-211ENST00000592965 CRAMP1Q96RY5 1269 aa30.29■■■□□ 2.44
MBD3-211ENST00000592965 IFT57Q9NWB7 429 aa30.29■■■□□ 2.44
MBD3-211ENST00000592965 SLC10A5Q5PT55 438 aa30.28■■■□□ 2.44
MBD3-211ENST00000592965 C3orf67Q6ZVT6 689 aa30.28■■■□□ 2.44
MBD3-211ENST00000592965 ZNF277Q9NRM2 450 aaPredicted RBP30.28■■■□□ 2.44
MBD3-211ENST00000592965 TCIRG1Q13488 830 aa30.27■■■□□ 2.44
MBD3-211ENST00000592965 DUSP27Q5VZP5 1158 aa30.27■■■□□ 2.44
MBD3-211ENST00000592965 NLRP10Q86W26 655 aa30.27■■■□□ 2.44
MBD3-211ENST00000592965 RBM17Q96I25 401 aaKnown RBP30.27■■■□□ 2.44
MBD3-211ENST00000592965 PSMD1Q99460 953 aa30.27■■■□□ 2.44
MBD3-211ENST00000592965 DBF4Q9UBU7 674 aaPredicted RBP30.27■■■□□ 2.44
MBD3-211ENST00000592965 NLRP3Q96P20 1036 aa30.26■■■□□ 2.43
MBD3-211ENST00000592965 SCN4AP35499 1836 aa30.26■■■□□ 2.43
MBD3-211ENST00000592965 GNAI1P63096 354 aa30.25■■■□□ 2.43
MBD3-211ENST00000592965 DDNO94850 711 aaPredicted RBP30.24■■■□□ 2.43
MBD3-211ENST00000592965 GRIPAP1Q4V328 841 aa30.24■■■□□ 2.43
MBD3-211ENST00000592965 SYNE4Q8N205 404 aa30.24■■■□□ 2.43
MBD3-211ENST00000592965 DNAJC5GQ8N7S2 189 aa30.24■■■□□ 2.43
MBD3-211ENST00000592965 IARSP41252 1262 aaKnown RBP30.23■■■□□ 2.43
MBD3-211ENST00000592965 PLBD2Q8NHP8 589 aa30.23■■■□□ 2.43
MBD3-211ENST00000592965 L3MBTL3Q96JM7 780 aaPredicted RBP30.23■■■□□ 2.43
MBD3-211ENST00000592965 HYPKQ9NX55 129 aa30.23■■■□□ 2.43
MBD3-211ENST00000592965 PPEF1O14829 653 aaPredicted RBP30.22■■■□□ 2.43
MBD3-211ENST00000592965 CCDC184Q52MB2 194 aa30.22■■■□□ 2.43
MBD3-211ENST00000592965 SH3TC1Q8TE82 1336 aa30.21■■■□□ 2.43
MBD3-211ENST00000592965 ANKRD13DQ6ZTN6 518 aa30.2■■■□□ 2.43
MBD3-211ENST00000592965 TRMT112Q9UI30 125 aaKnown RBP30.2■■■□□ 2.43
MBD3-211ENST00000592965 ZNF541Q9H0D2 1346 aa30.2■■■□□ 2.42
MBD3-211ENST00000592965 DDX60Q8IY21 1712 aaKnown RBP30.19■■■□□ 2.42
MBD3-211ENST00000592965 IQCA1LA6NCM1 817 aa30.18■■■□□ 2.42
MBD3-211ENST00000592965 FZD9O00144 591 aa30.18■■■□□ 2.42
MBD3-211ENST00000592965 ABCC4O15439 1325 aa30.18■■■□□ 2.42
MBD3-211ENST00000592965 ISCA1Q9BUE6 129 aa30.17■■■□□ 2.42
MBD3-211ENST00000592965 COL4A5P29400 1685 aa30.17■■■□□ 2.42
MBD3-211ENST00000592965 HCLS1P14317 486 aaPredicted RBP30.16■■■□□ 2.42
MBD3-211ENST00000592965 ATP6V0A2Q9Y487 856 aa30.16■■■□□ 2.42
MBD3-211ENST00000592965 HTRA3P83110 453 aa30.15■■■□□ 2.42
MBD3-211ENST00000592965 SLC51AQ86UW1 340 aa30.15■■■□□ 2.42
MBD3-211ENST00000592965 JDP2Q8WYK2 163 aa30.15■■■□□ 2.42
MBD3-211ENST00000592965 ZNF316A6NFI3 1004 aaPredicted RBP30.14■■■□□ 2.42
MBD3-211ENST00000592965 CCDC27Q2M243 656 aa30.13■■■□□ 2.41
MBD3-211ENST00000592965 TMX4Q9H1E5 349 aaPredicted RBP30.13■■■□□ 2.41
MBD3-211ENST00000592965 TAF1DQ9H5J8 278 aaPredicted RBP30.13■■■□□ 2.41
MBD3-211ENST00000592965 TAF1P21675 1872 aa30.12■■■□□ 2.41
MBD3-211ENST00000592965 TCERG1O14776 1098 aaKnown RBP30.12■■■□□ 2.41
MBD3-211ENST00000592965 BBOX1O75936 387 aa30.12■■■□□ 2.41
MBD3-211ENST00000592965 TRIM28Q13263 835 aaKnown RBP30.12■■■□□ 2.41
MBD3-211ENST00000592965 CHADLQ6NUI6 762 aa30.12■■■□□ 2.41
MBD3-211ENST00000592965 C8orf58Q8NAV2 365 aa30.12■■■□□ 2.41
MBD3-211ENST00000592965 KLRG1Q96E93 195 aa30.12■■■□□ 2.41
MBD3-211ENST00000592965 ELL2O00472 640 aaPredicted RBP30.11■■■□□ 2.41
MBD3-211ENST00000592965 GPC2Q8N158 579 aa30.11■■■□□ 2.41
MBD3-211ENST00000592965 CHMP4AQ9BY43 222 aa30.11■■■□□ 2.41
MBD3-211ENST00000592965 ATP5J2-PTCD1G3V325 749 aa30.1■■■□□ 2.41
MBD3-211ENST00000592965 POTEIP0CG38 1075 aa30.1■■■□□ 2.41
MBD3-211ENST00000592965 POTEJP0CG39 1038 aa30.1■■■□□ 2.41
MBD3-211ENST00000592965 GOLGA2Q08379 1002 aa30.1■■■□□ 2.41
MBD3-211ENST00000592965 DDX46Q7L014 1031 aaKnown RBP30.1■■■□□ 2.41
MBD3-211ENST00000592965 LARGE2Q8N3Y3 721 aa30.1■■■□□ 2.41
MBD3-211ENST00000592965 LRRC37AA6NMS7 1700 aa30.1■■■□□ 2.41
MBD3-211ENST00000592965 LDHDQ86WU2 507 aa30.09■■■□□ 2.41
MBD3-211ENST00000592965 ADAMTSL1Q8N6G6 1762 aa30.09■■■□□ 2.41
MBD3-211ENST00000592965 MRS2Q9HD23 443 aa30.09■■■□□ 2.41
MBD3-211ENST00000592965 HACL1Q9UJ83 578 aa30.09■■■□□ 2.41
MBD3-211ENST00000592965 ANP32CO43423 234 aa30.08■■■□□ 2.41
MBD3-211ENST00000592965 GRAPQ13588 217 aa30.08■■■□□ 2.41
MBD3-211ENST00000592965 NCBP3Q53F19 620 aaKnown RBP30.08■■■□□ 2.41
MBD3-211ENST00000592965 SP8Q8IXZ3 490 aa30.08■■■□□ 2.41
MBD3-211ENST00000592965 GRAPLQ8TC17 118 aaPredicted RBP30.08■■■□□ 2.41
MBD3-211ENST00000592965 EIF6P56537 245 aaKnown RBP30.07■■■□□ 2.4
MBD3-211ENST00000592965 RIC3Q7Z5B4 369 aa30.07■■■□□ 2.4
MBD3-211ENST00000592965 WWC1Q8IX03 1113 aa30.07■■■□□ 2.4
MBD3-211ENST00000592965 ZNF428Q96B54 188 aa30.07■■■□□ 2.4
MBD3-211ENST00000592965 FAM89AQ96GI7 184 aa30.07■■■□□ 2.4
MBD3-211ENST00000592965 RTFDC1Q9BY42 306 aaPredicted RBP30.07■■■□□ 2.4
MBD3-211ENST00000592965 VPS33BQ9H267 617 aa30.07■■■□□ 2.4
MBD3-211ENST00000592965 PHAXQ9H814 394 aaKnown RBP30.07■■■□□ 2.4
MBD3-211ENST00000592965 PCNTO95613 3336 aa30.07■■■□□ 2.4
MBD3-211ENST00000592965 CCDC30Q5VVM6 783 aa30.06■■■□□ 2.4
MBD3-211ENST00000592965 TMC4Q7Z404 712 aa30.06■■■□□ 2.4
MBD3-211ENST00000592965 JMYQ8N9B5 988 aa30.06■■■□□ 2.4
MBD3-211ENST00000592965 PPIP5K2O43314 1243 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms