RNA–Protein interactions for RNA: ENST00000592928.2

RAD51D-223, Transcript of RAD51 paralog D, human

TSL 1 (best)

Gene RAD51D, Length 207 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAD51D-223	ENST00000592928	NMRK2	Q9NPI5	230 aa		12.55	□□□□□ -0.4
RAD51D-223	ENST00000592928	DBF4	Q9UBU7	674 aa	Predicted RBP	12.55	□□□□□ -0.4
RAD51D-223	ENST00000592928	TOMM70	O94826	608 aa		12.54	□□□□□ -0.4
RAD51D-223	ENST00000592928	ALDH1B1	P30837	517 aa		12.54	□□□□□ -0.4
RAD51D-223	ENST00000592928	MRS2	Q9HD23	443 aa		12.54	□□□□□ -0.4
RAD51D-223	ENST00000592928	WDR90	Q96KV7	1748 aa		12.54	□□□□□ -0.4
RAD51D-223	ENST00000592928	HOXA10	P31260	410 aa	Predicted RBP	12.53	□□□□□ -0.4
RAD51D-223	ENST00000592928	NLRP10	Q86W26	655 aa		12.53	□□□□□ -0.4
RAD51D-223	ENST00000592928	PLBD2	Q8NHP8	589 aa		12.53	□□□□□ -0.4
RAD51D-223	ENST00000592928	HYPK	Q9NX55	129 aa		12.53	□□□□□ -0.4
RAD51D-223	ENST00000592928	ZNF219	Q9P2Y4	722 aa	Predicted RBP	12.53	□□□□□ -0.4
RAD51D-223	ENST00000592928	LAMB2	P55268	1798 aa		12.53	□□□□□ -0.4
RAD51D-223	ENST00000592928	GLTPD2	A6NH11	291 aa		12.52	□□□□□ -0.41
RAD51D-223	ENST00000592928	FKBP4	Q02790	459 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
RAD51D-223	ENST00000592928	AIMP1	Q12904	312 aa	Known RBP	12.52	□□□□□ -0.41
RAD51D-223	ENST00000592928	TCIRG1	Q13488	830 aa		12.52	□□□□□ -0.41
RAD51D-223	ENST00000592928	SLC10A5	Q5PT55	438 aa		12.52	□□□□□ -0.41
RAD51D-223	ENST00000592928	DIEXF	Q68CQ4	756 aa	Known RBP	12.52	□□□□□ -0.41
RAD51D-223	ENST00000592928	UTP14A	Q9BVJ6	771 aa	Known RBP	12.52	□□□□□ -0.41
RAD51D-223	ENST00000592928	HSPA6	P17066	643 aa		12.51	□□□□□ -0.41
RAD51D-223	ENST00000592928	CC2D2B	Q6DHV5	1058 aa		12.51	□□□□□ -0.41
RAD51D-223	ENST00000592928	WWC1	Q8IX03	1113 aa		12.51	□□□□□ -0.41
RAD51D-223	ENST00000592928	RTKN2	Q8IZC4	609 aa		12.51	□□□□□ -0.41
RAD51D-223	ENST00000592928	RBM46	Q8TBY0	533 aa	Known RBP	12.51	□□□□□ -0.41
RAD51D-223	ENST00000592928	RPGR	Q92834	1020 aa	Known RBP	12.51	□□□□□ -0.41
RAD51D-223	ENST00000592928	CRAMP1	Q96RY5	1269 aa		12.51	□□□□□ -0.41
RAD51D-223	ENST00000592928	CHMP4A	Q9BY43	222 aa		12.51	□□□□□ -0.41
RAD51D-223	ENST00000592928	IL16	Q14005	1332 aa		12.51	□□□□□ -0.41
RAD51D-223	ENST00000592928	DDX60	Q8IY21	1712 aa	Known RBP	12.51	□□□□□ -0.41
RAD51D-223	ENST00000592928	GRIPAP1	Q4V328	841 aa		12.5	□□□□□ -0.41
RAD51D-223	ENST00000592928	ANKRD13D	Q6ZTN6	518 aa		12.5	□□□□□ -0.41
RAD51D-223	ENST00000592928	NLRP3	Q96P20	1036 aa		12.5	□□□□□ -0.41
RAD51D-223	ENST00000592928	ISCA1	Q9BUE6	129 aa		12.5	□□□□□ -0.41
RAD51D-223	ENST00000592928	SH3TC1	Q8TE82	1336 aa		12.5	□□□□□ -0.41
RAD51D-223	ENST00000592928	C3orf67	Q6ZVT6	689 aa		12.49	□□□□□ -0.41
RAD51D-223	ENST00000592928	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.49	□□□□□ -0.41
RAD51D-223	ENST00000592928	C8orf58	Q8NAV2	365 aa		12.49	□□□□□ -0.41
RAD51D-223	ENST00000592928	RBM17	Q96I25	401 aa	Known RBP	12.49	□□□□□ -0.41
RAD51D-223	ENST00000592928	PSMD1	Q99460	953 aa		12.49	□□□□□ -0.41
RAD51D-223	ENST00000592928	LRRC37A	A6NMS7	1700 aa		12.48	□□□□□ -0.41
RAD51D-223	ENST00000592928	PPEF1	O14829	653 aa	Predicted RBP	12.48	□□□□□ -0.41
RAD51D-223	ENST00000592928	GOLGA2	Q08379	1002 aa		12.48	□□□□□ -0.41
RAD51D-223	ENST00000592928	FSTL1	Q12841	308 aa		12.48	□□□□□ -0.41
RAD51D-223	ENST00000592928	TRIM28	Q13263	835 aa	Known RBP	12.48	□□□□□ -0.41
RAD51D-223	ENST00000592928	DPY19L2	Q6NUT2	758 aa		12.48	□□□□□ -0.41
RAD51D-223	ENST00000592928	OLFM4	Q6UX06	510 aa		12.48	□□□□□ -0.41
RAD51D-223	ENST00000592928	RRAGC	Q9HB90	399 aa		12.48	□□□□□ -0.41
RAD51D-223	ENST00000592928	TRMT112	Q9UI30	125 aa	Known RBP	12.48	□□□□□ -0.41
RAD51D-223	ENST00000592928	ABCC4	O15439	1325 aa		12.47	□□□□□ -0.41
RAD51D-223	ENST00000592928	ELL2	O00472	640 aa	Predicted RBP	12.47	□□□□□ -0.41
RAD51D-223	ENST00000592928	VEGFA	P15692	232 aa	Predicted RBP	12.47	□□□□□ -0.41
RAD51D-223	ENST00000592928	IARS	P41252	1262 aa	Known RBP	12.47	□□□□□ -0.41
RAD51D-223	ENST00000592928	CCDC30	Q5VVM6	783 aa		12.47	□□□□□ -0.41
RAD51D-223	ENST00000592928	TSR2	Q969E8	191 aa	Known RBP	12.47	□□□□□ -0.41
RAD51D-223	ENST00000592928	SCN4A	P35499	1836 aa		12.46	□□□□□ -0.41
RAD51D-223	ENST00000592928	TSPYL6	Q8N831	410 aa		12.46	□□□□□ -0.41
RAD51D-223	ENST00000592928	PHAX	Q9H814	394 aa	Known RBP	12.46	□□□□□ -0.41
RAD51D-223	ENST00000592928	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.46	□□□□□ -0.41
RAD51D-223	ENST00000592928	COL4A5	P29400	1685 aa		12.45	□□□□□ -0.42
RAD51D-223	ENST00000592928	FANCI	Q9NVI1	1328 aa		12.45	□□□□□ -0.42
RAD51D-223	ENST00000592928	POTEC	B2RU33	542 aa		12.45	□□□□□ -0.42
RAD51D-223	ENST00000592928	DDX58	O95786	925 aa	Known RBP	12.45	□□□□□ -0.42
RAD51D-223	ENST00000592928	HCLS1	P14317	486 aa	Predicted RBP	12.45	□□□□□ -0.42
RAD51D-223	ENST00000592928	APLP1	P51693	650 aa		12.45	□□□□□ -0.42
RAD51D-223	ENST00000592928	RIC3	Q7Z5B4	369 aa		12.45	□□□□□ -0.42
RAD51D-223	ENST00000592928	WDR63	Q8IWG1	891 aa		12.45	□□□□□ -0.42
RAD51D-223	ENST00000592928	SYNE4	Q8N205	404 aa		12.45	□□□□□ -0.42
RAD51D-223	ENST00000592928	SMC1B	Q8NDV3	1235 aa		12.45	□□□□□ -0.42
RAD51D-223	ENST00000592928	L3MBTL3	Q96JM7	780 aa	Predicted RBP	12.45	□□□□□ -0.42
RAD51D-223	ENST00000592928	ATP6V0A2	Q9Y487	856 aa		12.45	□□□□□ -0.42
RAD51D-223	ENST00000592928	DUOX1	Q9NRD9	1551 aa		12.44	□□□□□ -0.42
RAD51D-223	ENST00000592928	ATP5J2-PTCD1	G3V325	749 aa		12.44	□□□□□ -0.42
RAD51D-223	ENST00000592928	FZD9	O00144	591 aa		12.44	□□□□□ -0.42
RAD51D-223	ENST00000592928	BBOX1	O75936	387 aa		12.44	□□□□□ -0.42
RAD51D-223	ENST00000592928	GRAP	Q13588	217 aa		12.44	□□□□□ -0.42
RAD51D-223	ENST00000592928	SF3B3	Q15393	1217 aa	Known RBP	12.44	□□□□□ -0.42
RAD51D-223	ENST00000592928	TWISTNB	Q3B726	338 aa	Predicted RBP	12.44	□□□□□ -0.42
RAD51D-223	ENST00000592928	GRAPL	Q8TC17	118 aa	Predicted RBP	12.44	□□□□□ -0.42
RAD51D-223	ENST00000592928	CEP350	Q5VT06	3117 aa		12.44	□□□□□ -0.42
RAD51D-223	ENST00000592928	ZNF541	Q9H0D2	1346 aa		12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	IQCA1L	A6NCM1	817 aa		12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	DDN	O94850	711 aa	Predicted RBP	12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	DDX46	Q7L014	1031 aa	Known RBP	12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	TMC4	Q7Z404	712 aa		12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	SLC51A	Q86UW1	340 aa		12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	CCDC191	Q8NCU4	936 aa		12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	FAM89A	Q96GI7	184 aa		12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	STK31	Q9BXU1	1019 aa		12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	TMX4	Q9H1E5	349 aa	Predicted RBP	12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	VPS33B	Q9H267	617 aa		12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	CACNA1F	O60840	1977 aa		12.43	□□□□□ -0.42
RAD51D-223	ENST00000592928	LTBP1	Q14766	1721 aa		12.42	□□□□□ -0.42
RAD51D-223	ENST00000592928	HSP90B1	P14625	803 aa	Known RBP	12.42	□□□□□ -0.42
RAD51D-223	ENST00000592928	SP8	Q8IXZ3	490 aa		12.42	□□□□□ -0.42
RAD51D-223	ENST00000592928	JDP2	Q8WYK2	163 aa		12.42	□□□□□ -0.42
RAD51D-223	ENST00000592928	MYD88	Q99836	296 aa		12.42	□□□□□ -0.42
RAD51D-223	ENST00000592928	METTL22	Q9BUU2	404 aa	Predicted RBP	12.42	□□□□□ -0.42
RAD51D-223	ENST00000592928	ADAMTSL1	Q8N6G6	1762 aa		12.42	□□□□□ -0.42

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