RNA–Protein interactions for RNA: ENST00000592632.5

DDX39A-218, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-218ENST00000592632 IBTKQ9P2D0 1353 aaPredicted RBP16.68■□□□□ 0.26
DDX39A-218ENST00000592632 SLC10A5Q5PT55 438 aa16.68■□□□□ 0.26
DDX39A-218ENST00000592632 SYNE4Q8N205 404 aa16.68■□□□□ 0.26
DDX39A-218ENST00000592632 ZNF526Q8TF50 670 aaPredicted RBP16.68■□□□□ 0.26
DDX39A-218ENST00000592632 ABCC12Q96J65 1359 aa16.67■□□□□ 0.26
DDX39A-218ENST00000592632 ANKRD36CQ5JPF3 1778 aa16.67■□□□□ 0.26
DDX39A-218ENST00000592632 PI4KAP2A4QPH2 592 aa16.67■□□□□ 0.26
DDX39A-218ENST00000592632 DDX58O95786 925 aaKnown RBP16.67■□□□□ 0.26
DDX39A-218ENST00000592632 KSR2Q6VAB6 950 aa16.67■□□□□ 0.26
DDX39A-218ENST00000592632 TTLL6Q8N841 843 aa16.67■□□□□ 0.26
DDX39A-218ENST00000592632 PI4KAP1Q8N8J0 262 aa16.67■□□□□ 0.26
DDX39A-218ENST00000592632 ZNF622Q969S3 477 aaKnown RBP eCLIP16.67■□□□□ 0.268e-18■□□□□ 10.2
DDX39A-218ENST00000592632 ZNF428Q96B54 188 aa16.67■□□□□ 0.26
DDX39A-218ENST00000592632 METTL22Q9BUU2 404 aaPredicted RBP16.67■□□□□ 0.26
DDX39A-218ENST00000592632 GPBP1L1Q9HC44 474 aaPredicted RBP16.67■□□□□ 0.26
DDX39A-218ENST00000592632 FLIIQ13045 1269 aa16.66■□□□□ 0.26
DDX39A-218ENST00000592632 STYK1Q6J9G0 422 aa16.66■□□□□ 0.26
DDX39A-218ENST00000592632 MASTLQ96GX5 879 aa16.66■□□□□ 0.26
DDX39A-218ENST00000592632 TRMT112Q9UI30 125 aaKnown RBP16.66■□□□□ 0.26
DDX39A-218ENST00000592632 MAP3K2Q9Y2U5 619 aa16.66■□□□□ 0.26
DDX39A-218ENST00000592632 ADCY9O60503 1353 aa16.65■□□□□ 0.26
DDX39A-218ENST00000592632 DLEC1Q9Y238 1755 aa16.65■□□□□ 0.26
DDX39A-218ENST00000592632 ARFGEF2Q9Y6D5 1785 aa16.65■□□□□ 0.26
DDX39A-218ENST00000592632 HNRNPUQ00839 825 aaKnown RBP eCLIP16.65■□□□□ 0.26
DDX39A-218ENST00000592632 C3orf67Q6ZVT6 689 aa16.65■□□□□ 0.26
DDX39A-218ENST00000592632 MYD88Q99836 296 aa16.65■□□□□ 0.26
DDX39A-218ENST00000592632 ARFGEF1Q9Y6D6 1849 aa16.65■□□□□ 0.26
DDX39A-218ENST00000592632 NPR1P16066 1061 aa16.64■□□□□ 0.25
DDX39A-218ENST00000592632 CRY2Q49AN0 593 aa16.64■□□□□ 0.25
DDX39A-218ENST00000592632 ARHGAP27Q6ZUM4 889 aa16.64■□□□□ 0.25
DDX39A-218ENST00000592632 CNKSR1Q969H4 720 aa16.64■□□□□ 0.25
DDX39A-218ENST00000592632 COL11A2P13942 1736 aaPredicted RBP16.64■□□□□ 0.25
DDX39A-218ENST00000592632 RNF123Q5XPI4 1314 aa16.64■□□□□ 0.25
DDX39A-218ENST00000592632 SLX4Q8IY92 1834 aa16.63■□□□□ 0.25
DDX39A-218ENST00000592632 IGKV5-2P06315 115 aa16.63■□□□□ 0.25
DDX39A-218ENST00000592632 HCLS1P14317 486 aaPredicted RBP16.63■□□□□ 0.25
DDX39A-218ENST00000592632 CCDC191Q8NCU4 936 aa16.63■□□□□ 0.25
DDX39A-218ENST00000592632 FAM89AQ96GI7 184 aa16.63■□□□□ 0.25
DDX39A-218ENST00000592632 RIC1Q4ADV7 1423 aa16.62■□□□□ 0.25
DDX39A-218ENST00000592632 HOXA10P31260 410 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-218ENST00000592632 FKBP5Q13451 457 aaPredicted RBP16.62■□□□□ 0.25
DDX39A-218ENST00000592632 NLRP3Q96P20 1036 aa16.62■□□□□ 0.25
DDX39A-218ENST00000592632 SH3TC1Q8TE82 1336 aa16.62■□□□□ 0.25
DDX39A-218ENST00000592632 MRPL50Q8N5N7 158 aaKnown RBP16.61■□□□□ 0.25
DDX39A-218ENST00000592632 C7orf43Q8WVR3 580 aa16.61■□□□□ 0.25
DDX39A-218ENST00000592632 SSH1Q8WYL5 1049 aa16.61■□□□□ 0.25
DDX39A-218ENST00000592632 TNRC6CQ9HCJ0 1690 aaKnown RBP16.61■□□□□ 0.25
DDX39A-218ENST00000592632 C21orf2O43822 256 aa16.6■□□□□ 0.25
DDX39A-218ENST00000592632 RTL5Q5HYW3 569 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-218ENST00000592632 PRPF40BQ6NWY9 871 aaKnown RBP16.6■□□□□ 0.25
DDX39A-218ENST00000592632 ZBTB38Q8NAP3 1195 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-218ENST00000592632 DNAAF4Q8WXU2 420 aa16.6■□□□□ 0.25
DDX39A-218ENST00000592632 JARID2Q92833 1246 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-218ENST00000592632 CWC25Q9NXE8 425 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-218ENST00000592632 ZNF219Q9P2Y4 722 aaPredicted RBP16.6■□□□□ 0.25
DDX39A-218ENST00000592632 F6X3S4 739 aa16.59■□□□□ 0.25
DDX39A-218ENST00000592632 ALDH1B1P30837 517 aa16.59■□□□□ 0.25
DDX39A-218ENST00000592632 CWF19L2Q2TBE0 894 aaKnown RBP16.59■□□□□ 0.25
DDX39A-218ENST00000592632 NEURL1BA8MQ27 555 aa16.58■□□□□ 0.24
DDX39A-218ENST00000592632 IRS4O14654 1257 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-218ENST00000592632 PCCAP05165 728 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-218ENST00000592632 CT47B1P0C2W7 299 aaPredicted RBP16.58■□□□□ 0.24
DDX39A-218ENST00000592632 NEXNQ0ZGT2 675 aa16.58■□□□□ 0.24
DDX39A-218ENST00000592632 RPGRQ92834 1020 aaKnown RBP16.58■□□□□ 0.24
DDX39A-218ENST00000592632 CRAMP1Q96RY5 1269 aa16.58■□□□□ 0.24
DDX39A-218ENST00000592632 CACNA1SQ13698 1873 aa16.57■□□□□ 0.24
DDX39A-218ENST00000592632 ALDH1L2Q3SY69 923 aa16.57■□□□□ 0.24
DDX39A-218ENST00000592632 RBM17Q96I25 401 aaKnown RBP16.57■□□□□ 0.24
DDX39A-218ENST00000592632 SBF1O95248 1867 aa16.56■□□□□ 0.24
DDX39A-218ENST00000592632 ZBED9Q6R2W3 1325 aa16.56■□□□□ 0.24
DDX39A-218ENST00000592632 H7C1W4 665 aa16.56■□□□□ 0.24
DDX39A-218ENST00000592632 PRELPP51888 382 aa16.56■□□□□ 0.24
DDX39A-218ENST00000592632 SF3B3Q15393 1217 aaKnown RBP16.56■□□□□ 0.24
DDX39A-218ENST00000592632 BEND3Q5T5X7 828 aa16.56■□□□□ 0.24
DDX39A-218ENST00000592632 OLFM4Q6UX06 510 aa16.56■□□□□ 0.24
DDX39A-218ENST00000592632 LINS1Q8NG48 757 aa16.56■□□□□ 0.24
DDX39A-218ENST00000592632 BCL2L13Q9BXK5 485 aa16.56■□□□□ 0.24
DDX39A-218ENST00000592632 NFKBIEO00221 500 aa16.55■□□□□ 0.24
DDX39A-218ENST00000592632 GCKRQ14397 625 aa16.55■□□□□ 0.24
DDX39A-218ENST00000592632 LAMB2P55268 1798 aa16.55■□□□□ 0.24
DDX39A-218ENST00000592632 DDX60Q8IY21 1712 aaKnown RBP16.55■□□□□ 0.24
DDX39A-218ENST00000592632 RARSP54136 660 aaKnown RBP16.54■□□□□ 0.24
DDX39A-218ENST00000592632 RASSF7Q02833 373 aa16.54■□□□□ 0.24
DDX39A-218ENST00000592632 C9orf131Q5VYM1 1079 aa16.54■□□□□ 0.24
DDX39A-218ENST00000592632 TAF1P21675 1872 aa16.54■□□□□ 0.24
DDX39A-218ENST00000592632 FER1L6Q2WGJ9 1857 aa16.54■□□□□ 0.24
DDX39A-218ENST00000592632 ABCC4O15439 1325 aa16.53■□□□□ 0.24
DDX39A-218ENST00000592632 CDHR2Q9BYE9 1310 aa16.53■□□□□ 0.24
DDX39A-218ENST00000592632 CCDC88AQ3V6T2 1871 aa16.53■□□□□ 0.24
DDX39A-218ENST00000592632 BRPF1P55201 1214 aaPredicted RBP16.53■□□□□ 0.24
DDX39A-218ENST00000592632 CASP7P55210 303 aa16.53■□□□□ 0.24
DDX39A-218ENST00000592632 SOGA3Q5TF21 947 aa16.53■□□□□ 0.24
DDX39A-218ENST00000592632 DDX46Q7L014 1031 aaKnown RBP16.53■□□□□ 0.24
DDX39A-218ENST00000592632 SLC51AQ86UW1 340 aa16.53■□□□□ 0.24
DDX39A-218ENST00000592632 SMC4Q9NTJ3 1288 aa16.53■□□□□ 0.24
DDX39A-218ENST00000592632 KIF3CO14782 793 aa16.52■□□□□ 0.24
DDX39A-218ENST00000592632 PDE8AO60658 829 aa16.52■□□□□ 0.24
DDX39A-218ENST00000592632 BBOX1O75936 387 aa16.52■□□□□ 0.24
DDX39A-218ENST00000592632 HSP90B1P14625 803 aaKnown RBP16.52■□□□□ 0.24
DDX39A-218ENST00000592632 HSPA6P17066 643 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms