RNA–Protein interactions for RNA: ENST00000592573.1

RDH13-221, Transcript of retinol dehydrogenase 13, humanhuman

TSL 2

Gene RDH13, Length 1,481 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-221ENST00000592573 CWC25Q9NXE8 425 aaPredicted RBP22.52■■□□□ 1.2
RDH13-221ENST00000592573 TRMT112Q9UI30 125 aaKnown RBP22.52■■□□□ 1.2
RDH13-221ENST00000592573 PARP10Q53GL7 1025 aa22.51■■□□□ 1.19
RDH13-221ENST00000592573 C20orf194Q5TEA3 1177 aa22.51■■□□□ 1.19
RDH13-221ENST00000592573 PRR5LQ6MZQ0 368 aa22.51■■□□□ 1.19
RDH13-221ENST00000592573 CNBD1Q8NA66 436 aa22.51■■□□□ 1.19
RDH13-221ENST00000592573 FAM89AQ96GI7 184 aa22.51■■□□□ 1.19
RDH13-221ENST00000592573 SRCIN1Q9C0H9 1055 aa22.51■■□□□ 1.19
RDH13-221ENST00000592573 GTF2E1P29083 439 aaPredicted RBP22.5■■□□□ 1.19
RDH13-221ENST00000592573 ABCC4O15439 1325 aa22.5■■□□□ 1.19
RDH13-221ENST00000592573 TRIM28Q13263 835 aaKnown RBP22.49■■□□□ 1.19
RDH13-221ENST00000592573 GCKRQ14397 625 aa22.49■■□□□ 1.19
RDH13-221ENST00000592573 PPP1R42Q7Z4L9 355 aa22.49■■□□□ 1.19
RDH13-221ENST00000592573 FTSJ3Q8IY81 847 aaKnown RBP22.49■■□□□ 1.19
RDH13-221ENST00000592573 TMEM57Q8N5G2 664 aa22.49■■□□□ 1.19
RDH13-221ENST00000592573 CCDC191Q8NCU4 936 aa22.49■■□□□ 1.19
RDH13-221ENST00000592573 SUPT16HQ9Y5B9 1047 aaKnown RBP22.49■■□□□ 1.19
RDH13-221ENST00000592573 ABCC12Q96J65 1359 aa22.49■■□□□ 1.19
RDH13-221ENST00000592573 SRCAPQ6ZRS2 3230 aa22.49■■□□□ 1.19
RDH13-221ENST00000592573 ANKRD36CQ5JPF3 1778 aa22.49■■□□□ 1.19
RDH13-221ENST00000592573 RRP1P56182 461 aaKnown RBP22.48■■□□□ 1.19
RDH13-221ENST00000592573 TPTE2Q6XPS3 522 aa22.48■■□□□ 1.19
RDH13-221ENST00000592573 DZIP1LQ8IYY4 767 aaKnown RBP22.48■■□□□ 1.19
RDH13-221ENST00000592573 COL24A1Q17RW2 1714 aa22.48■■□□□ 1.19
RDH13-221ENST00000592573 HCLS1P14317 486 aaPredicted RBP22.47■■□□□ 1.19
RDH13-221ENST00000592573 NYXQ9GZU5 481 aa22.47■■□□□ 1.19
RDH13-221ENST00000592573 CCT4P50991 539 aaKnown RBP22.46■■□□□ 1.19
RDH13-221ENST00000592573 UBE3BQ7Z3V4 1068 aa22.46■■□□□ 1.19
RDH13-221ENST00000592573 SH3TC1Q8TE82 1336 aa22.45■■□□□ 1.18
RDH13-221ENST00000592573 ALDH1L1O75891 902 aa22.45■■□□□ 1.18
RDH13-221ENST00000592573 ST5P78524 1137 aa22.45■■□□□ 1.18
RDH13-221ENST00000592573 C3orf67Q6ZVT6 689 aa22.45■■□□□ 1.18
RDH13-221ENST00000592573 ZBTB38Q8NAP3 1195 aaPredicted RBP22.45■■□□□ 1.18
RDH13-221ENST00000592573 AFDNP55196 1824 aaKnown RBP22.45■■□□□ 1.18
RDH13-221ENST00000592573 PXDNLA1KZ92 1463 aa22.45■■□□□ 1.18
RDH13-221ENST00000592573 INTS3Q68E01 1043 aaKnown RBP22.44■■□□□ 1.18
RDH13-221ENST00000592573 ITPRIPQ8IWB1 547 aa22.44■■□□□ 1.18
RDH13-221ENST00000592573 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.44■■□□□ 1.18
RDH13-221ENST00000592573 C9orf78Q9NZ63 289 aaPredicted RBP22.44■■□□□ 1.18
RDH13-221ENST00000592573 PCCAP05165 728 aaPredicted RBP22.43■■□□□ 1.18
RDH13-221ENST00000592573 FHDC1Q9C0D6 1143 aaPredicted RBP22.43■■□□□ 1.18
RDH13-221ENST00000592573 COG6Q9Y2V7 657 aa22.43■■□□□ 1.18
RDH13-221ENST00000592573 C10orf71Q711Q0 1435 aa22.43■■□□□ 1.18
RDH13-221ENST00000592573 IBTKQ9P2D0 1353 aaPredicted RBP22.43■■□□□ 1.18
RDH13-221ENST00000592573 H7C1W4 665 aa22.42■■□□□ 1.18
RDH13-221ENST00000592573 GRM8O00222 908 aa22.42■■□□□ 1.18
RDH13-221ENST00000592573 IRS4O14654 1257 aaPredicted RBP22.42■■□□□ 1.18
RDH13-221ENST00000592573 NBPF7P0C2Y1 421 aaPredicted RBP22.42■■□□□ 1.18
RDH13-221ENST00000592573 WWC3Q9ULE0 1092 aa22.42■■□□□ 1.18
RDH13-221ENST00000592573 NRXN2Q9P2S2 1712 aa22.42■■□□□ 1.18
RDH13-221ENST00000592573 CHRNA5P30532 468 aa22.41■■□□□ 1.18
RDH13-221ENST00000592573 CASP7P55210 303 aa22.41■■□□□ 1.18
RDH13-221ENST00000592573 NLGN2Q8NFZ4 835 aa22.41■■□□□ 1.18
RDH13-221ENST00000592573 MEIS3Q99687 375 aa22.41■■□□□ 1.18
RDH13-221ENST00000592573 USP44Q9H0E7 712 aa22.41■■□□□ 1.18
RDH13-221ENST00000592573 CCDC85AQ96PX6 553 aaPredicted RBP22.41■■□□□ 1.18
RDH13-221ENST00000592573 BRIP1Q9BX63 1249 aa22.4■■□□□ 1.18
RDH13-221ENST00000592573 RNF123Q5XPI4 1314 aa22.39■■□□□ 1.18
RDH13-221ENST00000592573 A0A0G2JLW4 131 aa22.39■■□□□ 1.17
RDH13-221ENST00000592573 CENPBP07199 599 aaPredicted RBP22.39■■□□□ 1.17
RDH13-221ENST00000592573 IRX6P78412 446 aaPredicted RBP22.39■■□□□ 1.17
RDH13-221ENST00000592573 SUCLG2Q96I99 432 aa22.39■■□□□ 1.17
RDH13-221ENST00000592573 TNRC6CQ9HCJ0 1690 aaKnown RBP22.38■■□□□ 1.17
RDH13-221ENST00000592573 EPHA10Q5JZY3 1008 aa22.38■■□□□ 1.17
RDH13-221ENST00000592573 SLC10A5Q5PT55 438 aa22.38■■□□□ 1.17
RDH13-221ENST00000592573 C2CD5Q86YS7 1000 aa22.38■■□□□ 1.17
RDH13-221ENST00000592573 MS4A1P11836 297 aa22.37■■□□□ 1.17
RDH13-221ENST00000592573 DPEP1P16444 411 aa22.37■■□□□ 1.17
RDH13-221ENST00000592573 PDE3AQ14432 1141 aa22.36■■□□□ 1.17
RDH13-221ENST00000592573 MVPQ14764 893 aaKnown RBP22.36■■□□□ 1.17
RDH13-221ENST00000592573 CD2APQ9Y5K6 639 aa22.36■■□□□ 1.17
RDH13-221ENST00000592573 LRP5O75197 1615 aa22.36■■□□□ 1.17
RDH13-221ENST00000592573 CDHR2Q9BYE9 1310 aa22.36■■□□□ 1.17
RDH13-221ENST00000592573 ANKRD31Q8N7Z5 1873 aa22.35■■□□□ 1.17
RDH13-221ENST00000592573 KAZALD1Q96I82 304 aa22.35■■□□□ 1.17
RDH13-221ENST00000592573 NLRP3Q96P20 1036 aa22.35■■□□□ 1.17
RDH13-221ENST00000592573 SYT17Q9BSW7 474 aa22.35■■□□□ 1.17
RDH13-221ENST00000592573 C1orf115Q9H7X2 142 aa22.35■■□□□ 1.17
RDH13-221ENST00000592573 UTYO14607 1347 aa22.35■■□□□ 1.17
RDH13-221ENST00000592573 UBTFL1P0CB47 393 aaPredicted RBP22.34■■□□□ 1.17
RDH13-221ENST00000592573 PDE6BP35913 854 aa22.34■■□□□ 1.17
RDH13-221ENST00000592573 CRBNQ96SW2 442 aa22.34■■□□□ 1.17
RDH13-221ENST00000592573 PDE8AO60658 829 aa22.34■■□□□ 1.17
RDH13-221ENST00000592573 FOXO4P98177 505 aa22.34■■□□□ 1.17
RDH13-221ENST00000592573 ZNF622Q969S3 477 aaKnown RBP eCLIP22.34■■□□□ 1.171e-6■□□□□ 11.2
RDH13-221ENST00000592573 LRRFIP2Q9Y608 721 aaKnown RBP22.34■■□□□ 1.17
RDH13-221ENST00000592573 N4BP2Q86UW6 1770 aaPredicted RBP22.33■■□□□ 1.17
RDH13-221ENST00000592573 DDX60Q8IY21 1712 aaKnown RBP22.33■■□□□ 1.17
RDH13-221ENST00000592573 H0YIN7 160 aa22.33■■□□□ 1.16
RDH13-221ENST00000592573 ZBTB7BO15156 539 aaPredicted RBP22.33■■□□□ 1.16
RDH13-221ENST00000592573 CTSWP56202 376 aa22.33■■□□□ 1.16
RDH13-221ENST00000592573 BICC1Q9H694 974 aaKnown RBP22.33■■□□□ 1.16
RDH13-221ENST00000592573 KCNA3P22001 575 aa22.32■■□□□ 1.16
RDH13-221ENST00000592573 CHMP3Q9Y3E7 222 aa22.32■■□□□ 1.16
RDH13-221ENST00000592573 KLRG2A4D1S0 409 aaPredicted RBP22.31■■□□□ 1.16
RDH13-221ENST00000592573 SRGNP10124 158 aa22.31■■□□□ 1.16
RDH13-221ENST00000592573 SLC51AQ86UW1 340 aa22.31■■□□□ 1.16
RDH13-221ENST00000592573 RPGRQ92834 1020 aaKnown RBP22.31■■□□□ 1.16
RDH13-221ENST00000592573 COL11A2P13942 1736 aaPredicted RBP22.3■■□□□ 1.16
RDH13-221ENST00000592573 GNAI3P08754 354 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms